RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 NSUN4Q96CB9 384 aaKnown RBP11.31□□□□□ -0.6
SPIDR-225ENST00000524141 LRRC45Q96CN5 670 aa11.31□□□□□ -0.6
SPIDR-225ENST00000524141 LRRC27Q9C0I9 530 aa11.31□□□□□ -0.6
SPIDR-225ENST00000524141 ZMYND12Q9H0C1 365 aa11.31□□□□□ -0.6
SPIDR-225ENST00000524141 TMBIM4Q9HC24 238 aa11.31□□□□□ -0.6
SPIDR-225ENST00000524141 KLC4Q9NSK0 619 aa11.31□□□□□ -0.6
SPIDR-225ENST00000524141 KAT6BQ8WYB5 2073 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 NKRFO15226 690 aaKnown RBP eCLIP11.3□□□□□ -0.6
SPIDR-225ENST00000524141 HDLBPQ00341 1268 aaKnown RBP11.3□□□□□ -0.6
SPIDR-225ENST00000524141 PSMD2Q13200 908 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 LETM2Q2VYF4 491 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 RUFY4Q6ZNE9 571 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 NEK8Q86SG6 692 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 CCDC50Q8IVM0 306 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 CCDC13Q8IYE1 715 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 STAG2Q8N3U4 1231 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 USP38Q8NB14 1042 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 TAF4BQ92750 862 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 JPH2Q9BR39 696 aaPredicted RBP11.3□□□□□ -0.6
SPIDR-225ENST00000524141 ISCUQ9H1K1 167 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 MAD2L2Q9UI95 211 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 MAST2Q6P0Q8 1798 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 ZSCAN5CA6NGD5 496 aaPredicted RBP11.3□□□□□ -0.6
SPIDR-225ENST00000524141 GNA11P29992 359 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 IFT88Q13099 833 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 SLC18A3Q16572 532 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 C6orf89Q6UWU4 347 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 LRRC55Q6ZSA7 311 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 CYFIP2Q96F07 1278 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 CDK5RAP3Q96JB5 506 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 TANGO6Q9C0B7 1094 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 ATP6V0A2Q9Y487 856 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 ABCA3Q99758 1704 aa11.3□□□□□ -0.6
SPIDR-225ENST00000524141 CCDC88AQ3V6T2 1871 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 KIF1CO43896 1103 aaKnown RBP11.29□□□□□ -0.6
SPIDR-225ENST00000524141 RASSF9O75901 435 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 MYBP10242 640 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 TECP42680 631 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 TFAP4Q01664 338 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 MECOMQ03112 1051 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 MTMR3Q13615 1198 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 NEDD9Q14511 834 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 LARP4BQ92615 738 aaKnown RBP11.29□□□□□ -0.6
SPIDR-225ENST00000524141 P3H4Q92791 437 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 C6orf50Q9HD87 102 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 GMNCA6NCL1 334 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 RAD51CO43502 376 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 NTSR2O95665 410 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 FTCDO95954 541 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 SEC24CP53992 1094 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 NAPAP54920 295 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 HLTFQ14527 1009 aaKnown RBP eCLIP11.29□□□□□ -0.62e-7■□□□□ 8.5
SPIDR-225ENST00000524141 TAX1BP1Q86VP1 789 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 HPS3Q969F9 1004 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 MMTAG2Q9BU76 263 aaKnown RBP11.29□□□□□ -0.6
SPIDR-225ENST00000524141 RAB34Q9BZG1 259 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 TMEM59LQ9UK28 342 aa11.29□□□□□ -0.6
SPIDR-225ENST00000524141 MYMKA6NI61 221 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 BTNL10A8MVZ5 291 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 TMCO5BA8MYB1 307 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 HPDP32754 393 aaPredicted RBP11.28□□□□□ -0.6
SPIDR-225ENST00000524141 FKBP3Q00688 224 aaKnown RBP11.28□□□□□ -0.6
SPIDR-225ENST00000524141 IFI16Q16666 785 aaKnown RBP11.28□□□□□ -0.6
SPIDR-225ENST00000524141 TMEM266Q2M3C6 531 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 FAM83BQ5T0W9 1011 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 C10orf76Q5T2E6 689 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 GIMAP7Q8NHV1 300 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 PBKQ96KB5 322 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 FAM84BQ96KN1 310 aaPredicted RBP11.28□□□□□ -0.6
SPIDR-225ENST00000524141 CALR3Q96L12 384 aaKnown RBP11.28□□□□□ -0.6
SPIDR-225ENST00000524141 SPZ1Q9BXG8 430 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 COL4A3BPQ9Y5P4 624 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 CYTH3O43739 400 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 C21orf2O43822 256 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 GNA14O95837 355 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 CYP2D6P10635 497 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 KLRC1P26715 233 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 EVX2Q03828 476 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 EHHADHQ08426 723 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 KIAA0753Q2KHM9 967 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 TEX2Q8IWB9 1127 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 ZKSCAN4Q969J2 545 aaPredicted RBP11.28□□□□□ -0.6
SPIDR-225ENST00000524141 CCDC114Q96M63 670 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 NLRC4Q9NPP4 1024 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 IL17RBQ9NRM6 502 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 BLOC1S4Q9NUP1 217 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 BSDC1Q9NW68 430 aaPredicted RBP11.28□□□□□ -0.6
SPIDR-225ENST00000524141 MCM9Q9NXL9 1143 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 STRCP1A6NGW2 1772 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 ATAD5Q96QE3 1844 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 PALM3A6NDB9 673 aaPredicted RBP11.28□□□□□ -0.6
SPIDR-225ENST00000524141 TRAPPC3O43617 180 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 HSD17B3P37058 310 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 KCNMA1Q12791 1236 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 GRB10Q13322 594 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 SEPT2Q15019 361 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 RPS6KA1Q15418 735 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 PREPLQ4J6C6 727 aaPredicted RBP11.28□□□□□ -0.6
SPIDR-225ENST00000524141 AGBL2Q5U5Z8 902 aa11.28□□□□□ -0.6
SPIDR-225ENST00000524141 PPANQ9NQ55 473 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms