RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 TLL1O43897 1013 aa17.91■□□□□ 0.46
MRPS28-209ENST00000522987 NBNO60934 754 aa17.91■□□□□ 0.46
MRPS28-209ENST00000522987 CKBP12277 381 aa17.91■□□□□ 0.46
MRPS28-209ENST00000522987 SELPP16109 830 aa17.91■□□□□ 0.46
MRPS28-209ENST00000522987 WDR5P61964 334 aaKnown RBP17.91■□□□□ 0.46
MRPS28-209ENST00000522987 SP2Q02086 613 aa17.91■□□□□ 0.46
MRPS28-209ENST00000522987 TRDNQ13061 729 aa17.91■□□□□ 0.46
MRPS28-209ENST00000522987 LAMC2Q13753 1193 aa17.91■□□□□ 0.46
MRPS28-209ENST00000522987 GRM4Q14833 912 aa17.91■□□□□ 0.46
MRPS28-209ENST00000522987 PGM5Q15124 567 aa17.91■□□□□ 0.46
MRPS28-209ENST00000522987 HSDL1Q3SXM5 330 aa17.91■□□□□ 0.46
MRPS28-209ENST00000522987 CAGE1Q8TC20 777 aa17.91■□□□□ 0.46
MRPS28-209ENST00000522987 AFAP1L1Q8TED9 768 aa17.91■□□□□ 0.46
MRPS28-209ENST00000522987 SPATA33Q96N06 139 aa17.91■□□□□ 0.46
MRPS28-209ENST00000522987 ZBED2Q9BTP6 218 aa17.91■□□□□ 0.46
MRPS28-209ENST00000522987 MTUS1Q9ULD2 1270 aa17.91■□□□□ 0.46
MRPS28-209ENST00000522987 MTCH2Q9Y6C9 303 aa17.91■□□□□ 0.46
MRPS28-209ENST00000522987 KIF28PB7ZC32 967 aa17.9■□□□□ 0.46
MRPS28-209ENST00000522987 NT5C2P49902 561 aa17.9■□□□□ 0.46
MRPS28-209ENST00000522987 KCNQ1P51787 676 aa17.9■□□□□ 0.46
MRPS28-209ENST00000522987 ZNF618Q5T7W0 954 aa17.9■□□□□ 0.46
MRPS28-209ENST00000522987 STOX1Q6ZVD7 989 aa17.9■□□□□ 0.46
MRPS28-209ENST00000522987 SESTD1Q86VW0 696 aa17.9■□□□□ 0.46
MRPS28-209ENST00000522987 PPTC7Q8NI37 304 aa17.9■□□□□ 0.46
MRPS28-209ENST00000522987 MTMR8Q96EF0 704 aa17.9■□□□□ 0.46
MRPS28-209ENST00000522987 UHRF1Q96T88 793 aaPredicted RBP17.9■□□□□ 0.46
MRPS28-209ENST00000522987 RAPGEFL1Q9UHV5 662 aa17.9■□□□□ 0.46
MRPS28-209ENST00000522987 NCOR1O75376 2440 aa17.89■□□□□ 0.45
MRPS28-209ENST00000522987 CYTH3O43739 400 aa17.89■□□□□ 0.45
MRPS28-209ENST00000522987 GTPBP6O43824 516 aaPredicted RBP17.89■□□□□ 0.45
MRPS28-209ENST00000522987 F2P00734 622 aa17.89■□□□□ 0.45
MRPS28-209ENST00000522987 UBA1P22314 1058 aaKnown RBP17.89■□□□□ 0.45
MRPS28-209ENST00000522987 CHMLP26374 656 aa17.89■□□□□ 0.45
MRPS28-209ENST00000522987 WTAPQ15007 396 aa17.89■□□□□ 0.45
MRPS28-209ENST00000522987 CELF3Q5SZQ8 465 aaKnown RBP17.89■□□□□ 0.45
MRPS28-209ENST00000522987 MYSM1Q5VVJ2 828 aa17.89■□□□□ 0.45
MRPS28-209ENST00000522987 RALYLQ86SE5 291 aaKnown RBP17.89■□□□□ 0.45
MRPS28-209ENST00000522987 PHOSPHO2Q8TCD6 241 aa17.89■□□□□ 0.45
MRPS28-209ENST00000522987 GDPD5Q8WTR4 605 aa17.89■□□□□ 0.45
MRPS28-209ENST00000522987 MYL10Q9BUA6 226 aa17.89■□□□□ 0.45
MRPS28-209ENST00000522987 TSPYL2Q9H2G4 693 aaPredicted RBP17.89■□□□□ 0.45
MRPS28-209ENST00000522987 NLRC5Q86WI3 1866 aa17.88■□□□□ 0.45
MRPS28-209ENST00000522987 ERICH2A1L162 156 aa17.88■□□□□ 0.45
MRPS28-209ENST00000522987 E7EWF7 191 aa17.88■□□□□ 0.45
MRPS28-209ENST00000522987 GCOM1H8Y6P7 765 aaPredicted RBP17.88■□□□□ 0.45
MRPS28-209ENST00000522987 HAS3O00219 553 aa17.88■□□□□ 0.45
MRPS28-209ENST00000522987 BAIAP3O94812 1187 aa17.88■□□□□ 0.45
MRPS28-209ENST00000522987 POLR2MP0CAP2 368 aa17.88■□□□□ 0.45
MRPS28-209ENST00000522987 CCND2P30279 289 aa17.88■□□□□ 0.45
MRPS28-209ENST00000522987 GRB10Q13322 594 aa17.88■□□□□ 0.45
MRPS28-209ENST00000522987 CNKSR3Q6P9H4 555 aa17.88■□□□□ 0.45
MRPS28-209ENST00000522987 EMID1Q96A84 441 aaPredicted RBP17.88■□□□□ 0.45
MRPS28-209ENST00000522987 KATNAL1Q9BW62 490 aa17.88■□□□□ 0.45
MRPS28-209ENST00000522987 MLXIPQ9HAP2 919 aa17.88■□□□□ 0.45
MRPS28-209ENST00000522987 RTEL1Q9NZ71 1219 aa17.88■□□□□ 0.45
MRPS28-209ENST00000522987 U3KPZ7 1027 aaPredicted RBP17.88■□□□□ 0.45
MRPS28-209ENST00000522987 BRWD1Q9NSI6 2320 aa17.87■□□□□ 0.45
MRPS28-209ENST00000522987 ANTXR2P58335 489 aa17.87■□□□□ 0.45
MRPS28-209ENST00000522987 SP4Q02446 784 aa17.87■□□□□ 0.45
MRPS28-209ENST00000522987 PTK7Q13308 1070 aa17.87■□□□□ 0.45
MRPS28-209ENST00000522987 MBTPS1Q14703 1052 aa17.87■□□□□ 0.45
MRPS28-209ENST00000522987 TRIM71Q2Q1W2 868 aaKnown RBP17.87■□□□□ 0.45
MRPS28-209ENST00000522987 VSIG10LQ86VR7 867 aa17.87■□□□□ 0.45
MRPS28-209ENST00000522987 RUFY2Q8WXA3 655 aa17.87■□□□□ 0.45
MRPS28-209ENST00000522987 MAF1Q9H063 256 aa17.87■□□□□ 0.45
MRPS28-209ENST00000522987 RIOX1Q9H6W3 641 aa17.87■□□□□ 0.45
MRPS28-209ENST00000522987 TELO2Q9Y4R8 837 aa17.87■□□□□ 0.45
MRPS28-209ENST00000522987 THPOP40225 353 aa17.86■□□□□ 0.45
MRPS28-209ENST00000522987 GHRHRQ02643 423 aa17.86■□□□□ 0.45
MRPS28-209ENST00000522987 TRAF7Q6Q0C0 670 aa17.86■□□□□ 0.45
MRPS28-209ENST00000522987 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.86■□□□□ 0.45
MRPS28-209ENST00000522987 RAB11FIP4Q86YS3 637 aa17.86■□□□□ 0.45
MRPS28-209ENST00000522987 NCOA7Q8NI08 942 aa17.86■□□□□ 0.45
MRPS28-209ENST00000522987 LOXHD1Q8IVV2 1947 aa17.86■□□□□ 0.45
MRPS28-209ENST00000522987 PNMA6FA0A0J9YX94 578 aa17.85■□□□□ 0.45
MRPS28-209ENST00000522987 CXCL10P02778 98 aa17.85■□□□□ 0.45
MRPS28-209ENST00000522987 CTSHP09668 335 aa17.85■□□□□ 0.45
MRPS28-209ENST00000522987 TROAPQ12815 778 aa17.85■□□□□ 0.45
MRPS28-209ENST00000522987 COL9A3Q14050 684 aaPredicted RBP17.85■□□□□ 0.45
MRPS28-209ENST00000522987 CATIPQ7Z7H3 387 aa17.85■□□□□ 0.45
MRPS28-209ENST00000522987 TRIM50Q86XT4 487 aa17.85■□□□□ 0.45
MRPS28-209ENST00000522987 C16orf70Q9BSU1 422 aa17.85■□□□□ 0.45
MRPS28-209ENST00000522987 OSBPL7Q9BZF2 842 aa17.85■□□□□ 0.45
MRPS28-209ENST00000522987 LPXNO60711 386 aa17.84■□□□□ 0.45
MRPS28-209ENST00000522987 PPFIA4O75335 1185 aa17.84■□□□□ 0.45
MRPS28-209ENST00000522987 LGALS2P05162 132 aa17.84■□□□□ 0.45
MRPS28-209ENST00000522987 BMP1P13497 986 aa17.84■□□□□ 0.45
MRPS28-209ENST00000522987 RXRAP19793 462 aa17.84■□□□□ 0.45
MRPS28-209ENST00000522987 MRPS9P82933 396 aaKnown RBP17.84■□□□□ 0.45
MRPS28-209ENST00000522987 RBL2Q08999 1139 aa17.84■□□□□ 0.45
MRPS28-209ENST00000522987 IKBKEQ14164 716 aa17.84■□□□□ 0.45
MRPS28-209ENST00000522987 SART3Q15020 963 aaKnown RBP17.84■□□□□ 0.45
MRPS28-209ENST00000522987 UTP14CQ5TAP6 766 aaKnown RBP17.84■□□□□ 0.45
MRPS28-209ENST00000522987 KCNV1Q6PIU1 500 aa17.84■□□□□ 0.45
MRPS28-209ENST00000522987 USP17L6PQ6QN14 398 aa17.84■□□□□ 0.45
MRPS28-209ENST00000522987 CYFIP1Q7L576 1253 aa17.84■□□□□ 0.45
MRPS28-209ENST00000522987 CMTR1Q8N1G2 835 aaKnown RBP17.84■□□□□ 0.45
MRPS28-209ENST00000522987 ATP6V0A1Q93050 837 aa17.84■□□□□ 0.45
MRPS28-209ENST00000522987 RBM8AQ9Y5S9 174 aaKnown RBP17.84■□□□□ 0.45
MRPS28-209ENST00000522987 hCG_1642624A0A1W2PR95 340 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms