RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 MFSD10Q14728 455 aa23.55■■□□□ 1.36
PABPC1-217ENST00000521067 KIAA0753Q2KHM9 967 aa23.55■■□□□ 1.36
PABPC1-217ENST00000521067 TRIM71Q2Q1W2 868 aaKnown RBP23.55■■□□□ 1.36
PABPC1-217ENST00000521067 CELF3Q5SZQ8 465 aaKnown RBP23.55■■□□□ 1.36
PABPC1-217ENST00000521067 TRAF7Q6Q0C0 670 aa23.55■■□□□ 1.36
PABPC1-217ENST00000521067 TMCO2Q7Z6W1 182 aaPredicted RBP23.55■■□□□ 1.36
PABPC1-217ENST00000521067 C7orf31Q8N865 590 aa23.55■■□□□ 1.36
PABPC1-217ENST00000521067 KIAA1217Q5T5P2 1943 aa23.55■■□□□ 1.36
PABPC1-217ENST00000521067 ANTXR2P58335 489 aa23.54■■□□□ 1.36
PABPC1-217ENST00000521067 KRT40Q6A162 431 aa23.54■■□□□ 1.36
PABPC1-217ENST00000521067 LRRC8DQ7L1W4 858 aa23.54■■□□□ 1.36
PABPC1-217ENST00000521067 MTCH2Q9Y6C9 303 aa23.54■■□□□ 1.36
PABPC1-217ENST00000521067 NCOR1O75376 2440 aa23.53■■□□□ 1.36
PABPC1-217ENST00000521067 MYH6P13533 1939 aa23.53■■□□□ 1.36
PABPC1-217ENST00000521067 PPFIA4O75335 1185 aa23.53■■□□□ 1.36
PABPC1-217ENST00000521067 BAIAP3O94812 1187 aa23.53■■□□□ 1.36
PABPC1-217ENST00000521067 CXCL10P02778 98 aa23.53■■□□□ 1.36
PABPC1-217ENST00000521067 POU3F3P20264 500 aaPredicted RBP23.53■■□□□ 1.36
PABPC1-217ENST00000521067 MRPS5P82675 430 aaKnown RBP23.53■■□□□ 1.36
PABPC1-217ENST00000521067 FCHSD1Q86WN1 690 aa23.53■■□□□ 1.36
PABPC1-217ENST00000521067 MICALL1Q8N3F8 863 aa23.53■■□□□ 1.36
PABPC1-217ENST00000521067 SAMD3Q8N6K7 520 aa23.53■■□□□ 1.36
PABPC1-217ENST00000521067 CCDC155Q8N6L0 562 aa23.53■■□□□ 1.36
PABPC1-217ENST00000521067 IGDCC4Q8TDY8 1250 aa23.53■■□□□ 1.36
PABPC1-217ENST00000521067 SPATA33Q96N06 139 aa23.53■■□□□ 1.36
PABPC1-217ENST00000521067 BDP1A6H8Y1 2624 aa23.52■■□□□ 1.36
PABPC1-217ENST00000521067 PNMA6FA0A0J9YX94 578 aa23.52■■□□□ 1.36
PABPC1-217ENST00000521067 GCOM1H8Y6P7 765 aaPredicted RBP23.52■■□□□ 1.36
PABPC1-217ENST00000521067 SGSM2O43147 1006 aa23.52■■□□□ 1.36
PABPC1-217ENST00000521067 GGPS1O95749 300 aa23.52■■□□□ 1.36
PABPC1-217ENST00000521067 POLR2MP0CAP2 368 aa23.52■■□□□ 1.36
PABPC1-217ENST00000521067 UBA1P22314 1058 aaKnown RBP23.52■■□□□ 1.36
PABPC1-217ENST00000521067 WDR5P61964 334 aaKnown RBP23.52■■□□□ 1.36
PABPC1-217ENST00000521067 IRX6P78412 446 aaPredicted RBP23.52■■□□□ 1.36
PABPC1-217ENST00000521067 MBTPS1Q14703 1052 aa23.52■■□□□ 1.36
PABPC1-217ENST00000521067 RUFY2Q8WXA3 655 aa23.52■■□□□ 1.36
PABPC1-217ENST00000521067 C16orf70Q9BSU1 422 aa23.52■■□□□ 1.36
PABPC1-217ENST00000521067 LCHNA4D1U4 455 aa23.51■■□□□ 1.35
PABPC1-217ENST00000521067 TNFRSF10AO00220 468 aa23.51■■□□□ 1.35
PABPC1-217ENST00000521067 DEFB103AP81534 67 aa23.51■■□□□ 1.35
PABPC1-217ENST00000521067 PTK7Q13308 1070 aa23.51■■□□□ 1.35
PABPC1-217ENST00000521067 WTAPQ15007 396 aa23.51■■□□□ 1.35
PABPC1-217ENST00000521067 NCOA7Q8NI08 942 aa23.51■■□□□ 1.35
PABPC1-217ENST00000521067 PIBF1Q8WXW3 757 aa23.51■■□□□ 1.35
PABPC1-217ENST00000521067 ARNTL2Q8WYA1 636 aa23.51■■□□□ 1.35
PABPC1-217ENST00000521067 KATNAL1Q9BW62 490 aa23.51■■□□□ 1.35
PABPC1-217ENST00000521067 TANC1Q9C0D5 1861 aa23.51■■□□□ 1.35
PABPC1-217ENST00000521067 TGFB3P10600 412 aa23.5■■□□□ 1.35
PABPC1-217ENST00000521067 MRPS9P82933 396 aaKnown RBP23.5■■□□□ 1.35
PABPC1-217ENST00000521067 TFF2Q03403 129 aa23.5■■□□□ 1.35
PABPC1-217ENST00000521067 COL9A3Q14050 684 aaPredicted RBP23.5■■□□□ 1.35
PABPC1-217ENST00000521067 ZNF618Q5T7W0 954 aa23.5■■□□□ 1.35
PABPC1-217ENST00000521067 KCNV1Q6PIU1 500 aa23.5■■□□□ 1.35
PABPC1-217ENST00000521067 RALYLQ86SE5 291 aaKnown RBP23.5■■□□□ 1.35
PABPC1-217ENST00000521067 MB21D2Q8IYB1 491 aaPredicted RBP23.5■■□□□ 1.35
PABPC1-217ENST00000521067 ADAMTS19Q8TE59 1207 aa23.5■■□□□ 1.35
PABPC1-217ENST00000521067 MAP4K1Q92918 833 aa23.5■■□□□ 1.35
PABPC1-217ENST00000521067 ERICH2A1L162 156 aa23.49■■□□□ 1.35
PABPC1-217ENST00000521067 KIF28PB7ZC32 967 aa23.49■■□□□ 1.35
PABPC1-217ENST00000521067 TLL1O43897 1013 aa23.49■■□□□ 1.35
PABPC1-217ENST00000521067 CCND2P30279 289 aa23.49■■□□□ 1.35
PABPC1-217ENST00000521067 KCNJ6P48051 423 aa23.49■■□□□ 1.35
PABPC1-217ENST00000521067 CNKSR3Q6P9H4 555 aa23.49■■□□□ 1.35
PABPC1-217ENST00000521067 LPXNO60711 386 aa23.48■■□□□ 1.35
PABPC1-217ENST00000521067 SEMA3FQ13275 785 aa23.48■■□□□ 1.35
PABPC1-217ENST00000521067 TELO2Q9Y4R8 837 aa23.48■■□□□ 1.35
PABPC1-217ENST00000521067 MYH7BA7E2Y1 1941 aa23.47■■□□□ 1.35
PABPC1-217ENST00000521067 PARNO95453 639 aaKnown RBP23.47■■□□□ 1.35
PABPC1-217ENST00000521067 BMP1P13497 986 aa23.47■■□□□ 1.35
PABPC1-217ENST00000521067 GRB10Q13322 594 aa23.47■■□□□ 1.35
PABPC1-217ENST00000521067 CATIPQ7Z7H3 387 aa23.47■■□□□ 1.35
PABPC1-217ENST00000521067 MYL10Q9BUA6 226 aa23.47■■□□□ 1.35
PABPC1-217ENST00000521067 MLXIPQ9HAP2 919 aa23.47■■□□□ 1.35
PABPC1-217ENST00000521067 RBM8AQ9Y5S9 174 aaKnown RBP23.47■■□□□ 1.35
PABPC1-217ENST00000521067 TRAF1Q13077 416 aa23.46■■□□□ 1.35
PABPC1-217ENST00000521067 FRMPD4Q14CM0 1322 aa23.46■■□□□ 1.35
PABPC1-217ENST00000521067 SART3Q15020 963 aaKnown RBP23.46■■□□□ 1.35
PABPC1-217ENST00000521067 SERINC5Q86VE9 423 aa23.46■■□□□ 1.35
PABPC1-217ENST00000521067 NECAB3Q96P71 396 aaPredicted RBP23.46■■□□□ 1.35
PABPC1-217ENST00000521067 INPP4AQ96PE3 977 aaPredicted RBP23.46■■□□□ 1.35
PABPC1-217ENST00000521067 UHRF1Q96T88 793 aaPredicted RBP23.46■■□□□ 1.35
PABPC1-217ENST00000521067 LY9Q9HBG7 655 aa23.46■■□□□ 1.35
PABPC1-217ENST00000521067 RTEL1Q9NZ71 1219 aa23.46■■□□□ 1.35
PABPC1-217ENST00000521067 PTPRSQ13332 1948 aa23.45■■□□□ 1.35
PABPC1-217ENST00000521067 ABHD14A-ACY1A0A1B0GW23 586 aa23.45■■□□□ 1.34
PABPC1-217ENST00000521067 SPATA31C2B4DYI2 1134 aa23.45■■□□□ 1.34
PABPC1-217ENST00000521067 H3BRB1 525 aa23.45■■□□□ 1.34
PABPC1-217ENST00000521067 GTPBP6O43824 516 aaPredicted RBP23.45■■□□□ 1.34
PABPC1-217ENST00000521067 GJB5O95377 273 aa23.45■■□□□ 1.34
PABPC1-217ENST00000521067 HOXC8P31273 242 aa23.45■■□□□ 1.34
PABPC1-217ENST00000521067 ICAM3P32942 547 aa23.45■■□□□ 1.34
PABPC1-217ENST00000521067 USP17L6PQ6QN14 398 aa23.45■■□□□ 1.34
PABPC1-217ENST00000521067 OSBPL7Q9BZF2 842 aa23.45■■□□□ 1.34
PABPC1-217ENST00000521067 TSPYL2Q9H2G4 693 aaPredicted RBP23.45■■□□□ 1.34
PABPC1-217ENST00000521067 TUT1Q9H6E5 874 aaKnown RBP23.45■■□□□ 1.34
PABPC1-217ENST00000521067 LGALS2P05162 132 aa23.44■■□□□ 1.34
PABPC1-217ENST00000521067 KCNQ1P51787 676 aa23.44■■□□□ 1.34
PABPC1-217ENST00000521067 MKRN4PQ13434 485 aaPredicted RBP23.44■■□□□ 1.34
PABPC1-217ENST00000521067 IKBKEQ14164 716 aa23.44■■□□□ 1.34
PABPC1-217ENST00000521067 SKIV2LQ15477 1246 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms