RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 CKAP4Q07065 602 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 DPYDQ12882 1025 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 SPP2Q13103 211 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 PAK1Q13153 545 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 MAP9Q49MG5 647 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 ARL6IP4Q66PJ3 421 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 IQCEQ6IPM2 695 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 TOGARAM2Q6ZUX3 1019 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 RASGRP2Q7LDG7 609 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 HDXQ7Z353 690 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 SH3RF1Q7Z6J0 888 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 SLF2Q8IX21 1173 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 TRMT44Q8IYL2 757 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 C7orf61Q8IZ16 206 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 CCDC148Q8NFR7 591 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 DIS3LQ8TF46 1054 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 COA7Q96BR5 231 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 PAGE5Q96GU1 130 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 LRCH3Q96II8 777 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 PAWRQ96IZ0 340 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 RPGRIP1Q96KN7 1286 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 NAPGQ99747 312 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 IDI2Q9BXS1 227 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 SENP2Q9HC62 589 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 ADD3Q9UEY8 706 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 LIMA1Q9UHB6 759 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 ZMYND8Q9ULU4 1186 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 CEP290O15078 2479 aa9.66□□□□□ -0.86
CTNNA1-223ENST00000520520 GAKO14976 1311 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 PTPRFP10586 1907 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 CTAGE15A4D2H0 777 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 SOX1O00570 391 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 PEX10O60683 326 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 CTNND1O60716 968 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 CTAGE8P0CG41 777 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 SYN1P17600 705 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 BMP6P22004 513 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 OAS2P29728 719 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 LONP1P36776 959 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 PBX1P40424 430 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 PLA2G4AP47712 749 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 GNAQP50148 359 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 HMGCS2P54868 508 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 ADKP55263 362 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 TRIM32Q13049 653 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 NR5A1Q13285 461 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 CUL4BQ13620 913 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 SMC1AQ14683 1233 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 MFSD10Q14728 455 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 SEC23AQ15436 765 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 HSP90B2PQ58FF3 399 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 SPTY2D1Q68D10 685 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 CCDC70Q6NSX1 233 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 TMTC3Q6ZXV5 915 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 UBE2Q1Q7Z7E8 422 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 CTAGE6Q86UF2 777 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 FOXP4Q8IVH2 680 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 FAM114A1Q8IWE2 563 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 CTAGE4Q8IX94 777 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 MSANTD4Q8NCY6 345 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 SLC17A8Q8NDX2 589 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 SYMPKQ92797 1274 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 EXOC4Q96A65 974 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 CRNKL1Q9BZJ0 848 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 ZNHIT6Q9NWK9 470 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 PSD3Q9NYI0 1048 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 MAGEC2Q9UBF1 373 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 ARPP21Q9UBL0 812 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 AGTPBP1Q9UPW5 1226 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 CTNND2Q9UQB3 1225 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 ADGRG1Q9Y653 693 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 PHIPQ8WWQ0 1821 aa9.65□□□□□ -0.86
CTNNA1-223ENST00000520520 COL6A3P12111 3177 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 MINDY4BA8MYZ0 360 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 LAD1O00515 517 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 N4BP3O15049 544 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 ORC4O43929 436 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 ATP2B1P20020 1258 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 EEF1GP26641 437 aaKnown RBP9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 GUCY1A2P33402 732 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 USP5P45974 858 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 KARSQ15046 597 aaKnown RBP9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 MUM1L1Q5H9M0 696 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 SPECC1Q5M775 1068 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 ZNF658Q5TYW1 1059 aaPredicted RBP9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 RRAGBQ5VZM2 374 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 GALNT17Q6IS24 598 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 KLHL10Q6JEL2 608 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 AMOTL1Q8IY63 956 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 GOLGA6L1Q8N7Z2 621 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 WDR24Q96S15 920 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 ZKSCAN3Q9BRR0 538 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.64□□□□□ -0.874e-11■■□□□ 12
CTNNA1-223ENST00000520520 CUEDC2Q9H467 287 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 SH3GLB2Q9NR46 395 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 SAMSN1Q9NSI8 373 aaKnown RBP9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 VPS54Q9P1Q0 977 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 PNMA3Q9UL41 463 aa9.64□□□□□ -0.87
CTNNA1-223ENST00000520520 ATAD5Q96QE3 1844 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms