RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 COL9A1P20849 921 aa21.38■■□□□ 1.01
SPOP-220ENST00000515508 DEFB103AP81534 67 aa21.38■■□□□ 1.01
SPOP-220ENST00000515508 PGM5Q15124 567 aa21.38■■□□□ 1.01
SPOP-220ENST00000515508 SKIV2LQ15477 1246 aaKnown RBP21.38■■□□□ 1.01
SPOP-220ENST00000515508 MYSM1Q5VVJ2 828 aa21.38■■□□□ 1.01
SPOP-220ENST00000515508 KRT40Q6A162 431 aa21.38■■□□□ 1.01
SPOP-220ENST00000515508 TRAF7Q6Q0C0 670 aa21.38■■□□□ 1.01
SPOP-220ENST00000515508 SPRED2Q7Z698 418 aa21.38■■□□□ 1.01
SPOP-220ENST00000515508 ALG1Q9BT22 464 aa21.38■■□□□ 1.01
SPOP-220ENST00000515508 COG5Q9UP83 839 aa21.38■■□□□ 1.01
SPOP-220ENST00000515508 PCDHA1Q9Y5I3 950 aa21.38■■□□□ 1.01
SPOP-220ENST00000515508 ABHD14A-ACY1A0A1B0GW23 586 aa21.37■■□□□ 1.01
SPOP-220ENST00000515508 LCHNA4D1U4 455 aa21.37■■□□□ 1.01
SPOP-220ENST00000515508 PPFIA4O75335 1185 aa21.37■■□□□ 1.01
SPOP-220ENST00000515508 KCNQ1P51787 676 aa21.37■■□□□ 1.01
SPOP-220ENST00000515508 GRB10Q13322 594 aa21.37■■□□□ 1.01
SPOP-220ENST00000515508 SLC35G1Q2M3R5 365 aa21.37■■□□□ 1.01
SPOP-220ENST00000515508 TCTN1Q2MV58 587 aa21.37■■□□□ 1.01
SPOP-220ENST00000515508 CELF3Q5SZQ8 465 aaKnown RBP21.37■■□□□ 1.01
SPOP-220ENST00000515508 VSIG10LQ86VR7 867 aa21.37■■□□□ 1.01
SPOP-220ENST00000515508 IL31RAQ8NI17 732 aa21.37■■□□□ 1.01
SPOP-220ENST00000515508 EXOC6Q8TAG9 804 aa21.37■■□□□ 1.01
SPOP-220ENST00000515508 WNT8BQ93098 351 aa21.37■■□□□ 1.01
SPOP-220ENST00000515508 NECAB3Q96P71 396 aaPredicted RBP21.37■■□□□ 1.01
SPOP-220ENST00000515508 MICAL3Q7RTP6 2002 aa21.36■■□□□ 1.01
SPOP-220ENST00000515508 EFCAB14O75071 495 aa21.36■■□□□ 1.01
SPOP-220ENST00000515508 GJB5O95377 273 aa21.36■■□□□ 1.01
SPOP-220ENST00000515508 TGFB3P10600 412 aa21.36■■□□□ 1.01
SPOP-220ENST00000515508 UBA1P22314 1058 aaKnown RBP21.36■■□□□ 1.01
SPOP-220ENST00000515508 HOXA13P31271 388 aaPredicted RBP21.36■■□□□ 1.01
SPOP-220ENST00000515508 MBTPS1Q14703 1052 aa21.36■■□□□ 1.01
SPOP-220ENST00000515508 HSDL1Q3SXM5 330 aa21.36■■□□□ 1.01
SPOP-220ENST00000515508 TMCO2Q7Z6W1 182 aaPredicted RBP21.36■■□□□ 1.01
SPOP-220ENST00000515508 RIOX1Q9H6W3 641 aa21.36■■□□□ 1.01
SPOP-220ENST00000515508 GGPS1O95749 300 aa21.35■■□□□ 1.01
SPOP-220ENST00000515508 MYCLP12524 364 aaPredicted RBP21.35■■□□□ 1.01
SPOP-220ENST00000515508 SP2Q02086 613 aa21.35■■□□□ 1.01
SPOP-220ENST00000515508 TRAF1Q13077 416 aa21.35■■□□□ 1.01
SPOP-220ENST00000515508 HIC1Q14526 733 aa21.35■■□□□ 1.01
SPOP-220ENST00000515508 GRM4Q14833 912 aa21.35■■□□□ 1.01
SPOP-220ENST00000515508 ZNF618Q5T7W0 954 aa21.35■■□□□ 1.01
SPOP-220ENST00000515508 SPATA33Q96N06 139 aa21.35■■□□□ 1.01
SPOP-220ENST00000515508 BAZ2BQ9UIF8 2168 aaKnown RBP21.34■■□□□ 1.01
SPOP-220ENST00000515508 GSPT1P15170 499 aaKnown RBP21.34■■□□□ 1.01
SPOP-220ENST00000515508 HOXC8P31273 242 aa21.34■■□□□ 1.01
SPOP-220ENST00000515508 HOMER1Q86YM7 354 aa21.34■■□□□ 1.01
SPOP-220ENST00000515508 PIGSQ96S52 555 aa21.34■■□□□ 1.01
SPOP-220ENST00000515508 RAD9AQ99638 391 aa21.34■■□□□ 1.01
SPOP-220ENST00000515508 C16orf70Q9BSU1 422 aa21.34■■□□□ 1.01
SPOP-220ENST00000515508 ZBED2Q9BTP6 218 aa21.34■■□□□ 1.01
SPOP-220ENST00000515508 LMCD1Q9NZU5 365 aa21.34■■□□□ 1.01
SPOP-220ENST00000515508 FRMPD4Q14CM0 1322 aa21.33■■□□□ 1.01
SPOP-220ENST00000515508 EMSYQ7Z589 1322 aa21.33■■□□□ 1.01
SPOP-220ENST00000515508 BRWD1Q9NSI6 2320 aa21.33■■□□□ 1.01
SPOP-220ENST00000515508 GCOM1H8Y6P7 765 aaPredicted RBP21.33■■□□□ 1.01
SPOP-220ENST00000515508 CYTH3O43739 400 aa21.33■■□□□ 1.01
SPOP-220ENST00000515508 CYP21A2P08686 494 aa21.33■■□□□ 1.01
SPOP-220ENST00000515508 POLR2MP0CAP2 368 aa21.33■■□□□ 1.01
SPOP-220ENST00000515508 CCND2P30279 289 aa21.33■■□□□ 1.01
SPOP-220ENST00000515508 ZNF200P98182 395 aaPredicted RBP21.33■■□□□ 1.01
SPOP-220ENST00000515508 TRDNQ13061 729 aa21.33■■□□□ 1.01
SPOP-220ENST00000515508 MKRN4PQ13434 485 aaPredicted RBP21.33■■□□□ 1.01
SPOP-220ENST00000515508 IKBKEQ14164 716 aa21.33■■□□□ 1.01
SPOP-220ENST00000515508 TTC22Q5TAA0 569 aa21.33■■□□□ 1.01
SPOP-220ENST00000515508 SERINC5Q86VE9 423 aa21.33■■□□□ 1.01
SPOP-220ENST00000515508 HLA-CQ95604 372 aa21.33■■□□□ 1.01
SPOP-220ENST00000515508 LGR5O75473 907 aa21.32■■□□□ 1
SPOP-220ENST00000515508 ERVK-21P61565 698 aa21.32■■□□□ 1
SPOP-220ENST00000515508 TROAPQ12815 778 aa21.32■■□□□ 1
SPOP-220ENST00000515508 GDPD5Q8WTR4 605 aa21.32■■□□□ 1
SPOP-220ENST00000515508 GPKOWQ92917 476 aaPredicted RBP eCLIP21.32■■□□□ 1
SPOP-220ENST00000515508 DOCK5Q9H7D0 1870 aa21.31■■□□□ 1
SPOP-220ENST00000515508 LINC01553A4QN01 128 aa21.31■■□□□ 1
SPOP-220ENST00000515508 SORBS3O60504 671 aa21.31■■□□□ 1
SPOP-220ENST00000515508 PDE4AP27815 886 aa21.31■■□□□ 1
SPOP-220ENST00000515508 TGS1Q96RS0 853 aaKnown RBP21.31■■□□□ 1
SPOP-220ENST00000515508 SENP2Q9HC62 589 aa21.31■■□□□ 1
SPOP-220ENST00000515508 U3KPZ7 1027 aaPredicted RBP21.31■■□□□ 1
SPOP-220ENST00000515508 COL4A6Q14031 1691 aa21.31■■□□□ 1
SPOP-220ENST00000515508 PNMA6FA0A0J9YX94 578 aa21.3■■□□□ 1
SPOP-220ENST00000515508 IFIT3O14879 490 aaKnown RBP21.3■■□□□ 1
SPOP-220ENST00000515508 STAM2O75886 525 aa21.3■■□□□ 1
SPOP-220ENST00000515508 INPP4AQ96PE3 977 aaPredicted RBP21.3■■□□□ 1
SPOP-220ENST00000515508 SUGCTQ9HAC7 445 aa21.3■■□□□ 1
SPOP-220ENST00000515508 MLXIPQ9HAP2 919 aa21.3■■□□□ 1
SPOP-220ENST00000515508 ERICH2A1L162 156 aa21.29■■□□□ 1
SPOP-220ENST00000515508 C17orf102A2RUQ5 167 aa21.29■■□□□ 1
SPOP-220ENST00000515508 RSPH10B2B2RC85 870 aa21.29■■□□□ 1
SPOP-220ENST00000515508 H3BRB1 525 aa21.29■■□□□ 1
SPOP-220ENST00000515508 LGALS2P05162 132 aa21.29■■□□□ 1
SPOP-220ENST00000515508 RSPH10BP0C881 870 aa21.29■■□□□ 1
SPOP-220ENST00000515508 ICAM3P32942 547 aa21.29■■□□□ 1
SPOP-220ENST00000515508 THPOP40225 353 aa21.29■■□□□ 1
SPOP-220ENST00000515508 MRPS9P82933 396 aaKnown RBP21.29■■□□□ 1
SPOP-220ENST00000515508 PTH1RQ03431 593 aa21.29■■□□□ 1
SPOP-220ENST00000515508 GNPTABQ3T906 1256 aa21.29■■□□□ 1
SPOP-220ENST00000515508 FCHSD1Q86WN1 690 aa21.29■■□□□ 1
SPOP-220ENST00000515508 DBF4BQ8NFT6 615 aa21.29■■□□□ 1
SPOP-220ENST00000515508 C1QTNF1Q9BXJ1 281 aa21.29■■□□□ 1
SPOP-220ENST00000515508 TUT1Q9H6E5 874 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms