RNA–Protein interactions for RNA: ENST00000515145.1

TNFRSF25-220, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 4

Gene TNFRSF25, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-220ENST00000515145 DHX38Q92620 1227 aaKnown RBP18.92■□□□□ 0.62
TNFRSF25-220ENST00000515145 LZTS2Q9BRK4 669 aa18.92■□□□□ 0.62
TNFRSF25-220ENST00000515145 KATNAL1Q9BW62 490 aa18.92■□□□□ 0.62
TNFRSF25-220ENST00000515145 NKX2-4Q9H2Z4 354 aa18.92■□□□□ 0.62
TNFRSF25-220ENST00000515145 TRIP12Q14669 1992 aaPredicted RBP18.92■□□□□ 0.62
TNFRSF25-220ENST00000515145 CCDC69A6NI79 296 aa18.91■□□□□ 0.62
TNFRSF25-220ENST00000515145 SORBS3O60504 671 aa18.91■□□□□ 0.62
TNFRSF25-220ENST00000515145 RXRAP19793 462 aa18.91■□□□□ 0.62
TNFRSF25-220ENST00000515145 LIFRP42702 1097 aa18.91■□□□□ 0.62
TNFRSF25-220ENST00000515145 GNAQP50148 359 aa18.91■□□□□ 0.62
TNFRSF25-220ENST00000515145 MRPS9P82933 396 aaKnown RBP18.91■□□□□ 0.62
TNFRSF25-220ENST00000515145 SP2Q02086 613 aa18.91■□□□□ 0.62
TNFRSF25-220ENST00000515145 RBL2Q08999 1139 aa18.91■□□□□ 0.62
TNFRSF25-220ENST00000515145 HSDL1Q3SXM5 330 aa18.91■□□□□ 0.62
TNFRSF25-220ENST00000515145 TMTC2Q8N394 836 aa18.91■□□□□ 0.62
TNFRSF25-220ENST00000515145 SRBD1Q8N5C6 995 aaKnown RBP18.91■□□□□ 0.62
TNFRSF25-220ENST00000515145 CCDC155Q8N6L0 562 aa18.91■□□□□ 0.62
TNFRSF25-220ENST00000515145 SPATA33Q96N06 139 aa18.91■□□□□ 0.62
TNFRSF25-220ENST00000515145 ALG1Q9BT22 464 aa18.91■□□□□ 0.62
TNFRSF25-220ENST00000515145 HDAC6Q9UBN7 1215 aa18.91■□□□□ 0.62
TNFRSF25-220ENST00000515145 PRUNE2Q8WUY3 3088 aa18.9■□□□□ 0.62
TNFRSF25-220ENST00000515145 TGFB3P10600 412 aa18.9■□□□□ 0.62
TNFRSF25-220ENST00000515145 ATP2A2P16615 1042 aaKnown RBP18.9■□□□□ 0.62
TNFRSF25-220ENST00000515145 RABGGTBP53611 331 aa18.9■□□□□ 0.62
TNFRSF25-220ENST00000515145 KIAA0753Q2KHM9 967 aa18.9■□□□□ 0.62
TNFRSF25-220ENST00000515145 C7orf31Q8N865 590 aa18.9■□□□□ 0.62
TNFRSF25-220ENST00000515145 AFAP1L1Q8TED9 768 aa18.9■□□□□ 0.62
TNFRSF25-220ENST00000515145 INPP4AQ96PE3 977 aaPredicted RBP18.9■□□□□ 0.62
TNFRSF25-220ENST00000515145 LRRC2Q9BYS8 371 aa18.9■□□□□ 0.62
TNFRSF25-220ENST00000515145 PRDM12Q9H4Q4 367 aa18.9■□□□□ 0.62
TNFRSF25-220ENST00000515145 SEC63Q9UGP8 760 aaKnown RBP18.9■□□□□ 0.62
TNFRSF25-220ENST00000515145 PPFIA4O75335 1185 aa18.89■□□□□ 0.61
TNFRSF25-220ENST00000515145 CALM1P0DP23 149 aa18.89■□□□□ 0.61
TNFRSF25-220ENST00000515145 CALM2P0DP24 149 aa18.89■□□□□ 0.61
TNFRSF25-220ENST00000515145 CALM3P0DP25 149 aa18.89■□□□□ 0.61
TNFRSF25-220ENST00000515145 ACTN1P12814 892 aa18.89■□□□□ 0.61
TNFRSF25-220ENST00000515145 ICAM3P32942 547 aa18.89■□□□□ 0.61
TNFRSF25-220ENST00000515145 SEMA3FQ13275 785 aa18.89■□□□□ 0.61
TNFRSF25-220ENST00000515145 GNPTABQ3T906 1256 aa18.89■□□□□ 0.61
TNFRSF25-220ENST00000515145 USP17L6PQ6QN14 398 aa18.89■□□□□ 0.61
TNFRSF25-220ENST00000515145 RAB11FIP4Q86YS3 637 aa18.89■□□□□ 0.61
TNFRSF25-220ENST00000515145 CMTR1Q8N1G2 835 aaKnown RBP18.89■□□□□ 0.61
TNFRSF25-220ENST00000515145 USP38Q8NB14 1042 aa18.89■□□□□ 0.61
TNFRSF25-220ENST00000515145 SMARCC2Q8TAQ2 1214 aa18.89■□□□□ 0.61
TNFRSF25-220ENST00000515145 PCDHA11Q9Y5I1 949 aa18.89■□□□□ 0.61
TNFRSF25-220ENST00000515145 PIK3CDO00329 1044 aa18.88■□□□□ 0.61
TNFRSF25-220ENST00000515145 MEIS2O14770 477 aa18.88■□□□□ 0.61
TNFRSF25-220ENST00000515145 STAM2O75886 525 aa18.88■□□□□ 0.61
TNFRSF25-220ENST00000515145 MYOGP15173 224 aa18.88■□□□□ 0.61
TNFRSF25-220ENST00000515145 SELPP16109 830 aa18.88■□□□□ 0.61
TNFRSF25-220ENST00000515145 GPNMBQ14956 572 aa18.88■□□□□ 0.61
TNFRSF25-220ENST00000515145 TMTC3Q6ZXV5 915 aa18.88■□□□□ 0.61
TNFRSF25-220ENST00000515145 LRRC8DQ7L1W4 858 aa18.88■□□□□ 0.61
TNFRSF25-220ENST00000515145 SGMS1Q86VZ5 419 aa18.88■□□□□ 0.61
TNFRSF25-220ENST00000515145 CUL5Q93034 780 aa18.88■□□□□ 0.61
TNFRSF25-220ENST00000515145 GAS2L1Q99501 681 aaPredicted RBP18.88■□□□□ 0.61
TNFRSF25-220ENST00000515145 FTOQ9C0B1 505 aaKnown RBP eCLIP18.88■□□□□ 0.61
TNFRSF25-220ENST00000515145 BCAS3Q9H6U6 928 aa18.88■□□□□ 0.61
TNFRSF25-220ENST00000515145 MLXIPQ9HAP2 919 aa18.88■□□□□ 0.61
TNFRSF25-220ENST00000515145 SLC28A3Q9HAS3 691 aa18.88■□□□□ 0.61
TNFRSF25-220ENST00000515145 SLC12A7Q9Y666 1083 aa18.88■□□□□ 0.61
TNFRSF25-220ENST00000515145 CHD7Q9P2D1 2997 aa18.88■□□□□ 0.61
TNFRSF25-220ENST00000515145 TTC28Q96AY4 2481 aa18.88■□□□□ 0.61
TNFRSF25-220ENST00000515145 SPATA31C2B4DYI2 1134 aa18.87■□□□□ 0.61
TNFRSF25-220ENST00000515145 HIC1Q14526 733 aa18.87■□□□□ 0.61
TNFRSF25-220ENST00000515145 TRIM71Q2Q1W2 868 aaKnown RBP18.87■□□□□ 0.61
TNFRSF25-220ENST00000515145 RNF20Q5VTR2 975 aa18.87■□□□□ 0.61
TNFRSF25-220ENST00000515145 MICU3Q86XE3 530 aa18.87■□□□□ 0.61
TNFRSF25-220ENST00000515145 WNT8BQ93098 351 aa18.87■□□□□ 0.61
TNFRSF25-220ENST00000515145 SLC9A7Q96T83 725 aa18.87■□□□□ 0.61
TNFRSF25-220ENST00000515145 C16orf70Q9BSU1 422 aa18.87■□□□□ 0.61
TNFRSF25-220ENST00000515145 DOCK5Q9H7D0 1870 aa18.86■□□□□ 0.61
TNFRSF25-220ENST00000515145 FIBPO43427 364 aa18.86■□□□□ 0.61
TNFRSF25-220ENST00000515145 CDC45O75419 566 aa18.86■□□□□ 0.61
TNFRSF25-220ENST00000515145 LGALS2P05162 132 aa18.86■□□□□ 0.61
TNFRSF25-220ENST00000515145 CKBP12277 381 aa18.86■□□□□ 0.61
TNFRSF25-220ENST00000515145 ZNF200P98182 395 aaPredicted RBP18.86■□□□□ 0.61
TNFRSF25-220ENST00000515145 PTK7Q13308 1070 aa18.86■□□□□ 0.61
TNFRSF25-220ENST00000515145 ADGRE1Q14246 886 aa18.86■□□□□ 0.61
TNFRSF25-220ENST00000515145 PCNX4Q63HM2 1172 aa18.86■□□□□ 0.61
TNFRSF25-220ENST00000515145 PPP2R2DQ66LE6 453 aa18.86■□□□□ 0.61
TNFRSF25-220ENST00000515145 TRAF7Q6Q0C0 670 aa18.86■□□□□ 0.61
TNFRSF25-220ENST00000515145 METTL7BQ6UX53 244 aa18.86■□□□□ 0.61
TNFRSF25-220ENST00000515145 PRDM6Q9NQX0 595 aa18.86■□□□□ 0.61
TNFRSF25-220ENST00000515145 RTEL1Q9NZ71 1219 aa18.86■□□□□ 0.61
TNFRSF25-220ENST00000515145 PTPRSQ13332 1948 aa18.85■□□□□ 0.61
TNFRSF25-220ENST00000515145 hCG_1642624A0A1W2PR95 340 aa18.85■□□□□ 0.61
TNFRSF25-220ENST00000515145 BAIAP3O94812 1187 aa18.85■□□□□ 0.61
TNFRSF25-220ENST00000515145 CXCL10P02778 98 aa18.85■□□□□ 0.61
TNFRSF25-220ENST00000515145 NEDD9Q14511 834 aa18.85■□□□□ 0.61
TNFRSF25-220ENST00000515145 XRRA1Q6P2D8 792 aa18.85■□□□□ 0.61
TNFRSF25-220ENST00000515145 RASEFQ8IZ41 740 aa18.85■□□□□ 0.61
TNFRSF25-220ENST00000515145 FANCBQ8NB91 859 aa18.85■□□□□ 0.61
TNFRSF25-220ENST00000515145 PHOSPHO2Q8TCD6 241 aa18.85■□□□□ 0.61
TNFRSF25-220ENST00000515145 NEK1Q96PY6 1258 aa18.85■□□□□ 0.61
TNFRSF25-220ENST00000515145 SPTBN5Q9NRC6 3674 aaKnown RBP18.85■□□□□ 0.61
TNFRSF25-220ENST00000515145 CNTNAP5Q8WYK1 1306 aa18.84■□□□□ 0.61
TNFRSF25-220ENST00000515145 NOP56O00567 594 aaKnown RBP18.84■□□□□ 0.61
TNFRSF25-220ENST00000515145 NBNO60934 754 aa18.84■□□□□ 0.61
TNFRSF25-220ENST00000515145 PARNO95453 639 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms