RNA–Protein interactions for RNA: ENST00000508639.5

SIL1-210, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-210ENST00000508639 KRT23Q9C075 422 aa12.24□□□□□ -0.45
SIL1-210ENST00000508639 MTIF3Q9H2K0 278 aaKnown RBP12.24□□□□□ -0.45
SIL1-210ENST00000508639 COL4A4P53420 1690 aaPredicted RBP12.23□□□□□ -0.45
SIL1-210ENST00000508639 SELPP16109 830 aa12.23□□□□□ -0.45
SIL1-210ENST00000508639 CASTP20810 708 aaKnown RBP12.23□□□□□ -0.45
SIL1-210ENST00000508639 MRPS5P82675 430 aaKnown RBP12.23□□□□□ -0.45
SIL1-210ENST00000508639 GRB10Q13322 594 aa12.23□□□□□ -0.45
SIL1-210ENST00000508639 BFSP2Q13515 415 aa12.23□□□□□ -0.45
SIL1-210ENST00000508639 MFSD10Q14728 455 aa12.23□□□□□ -0.45
SIL1-210ENST00000508639 KIAA0753Q2KHM9 967 aa12.23□□□□□ -0.45
SIL1-210ENST00000508639 CELF3Q5SZQ8 465 aaKnown RBP12.23□□□□□ -0.45
SIL1-210ENST00000508639 IFIT1BQ5T764 474 aaKnown RBP12.23□□□□□ -0.45
SIL1-210ENST00000508639 MCF2L2Q86YR7 1114 aa12.23□□□□□ -0.45
SIL1-210ENST00000508639 RETREG2Q8NC44 543 aa12.23□□□□□ -0.45
SIL1-210ENST00000508639 PPTC7Q8NI37 304 aa12.23□□□□□ -0.45
SIL1-210ENST00000508639 ADAMTS19Q8TE59 1207 aa12.23□□□□□ -0.45
SIL1-210ENST00000508639 AFAP1L1Q8TED9 768 aa12.23□□□□□ -0.45
SIL1-210ENST00000508639 SLC9A7Q96T83 725 aa12.23□□□□□ -0.45
SIL1-210ENST00000508639 AMNQ9BXJ7 453 aa12.23□□□□□ -0.45
SIL1-210ENST00000508639 FTOQ9C0B1 505 aaKnown RBP eCLIP12.23□□□□□ -0.45
SIL1-210ENST00000508639 PCDHA1Q9Y5I3 950 aa12.23□□□□□ -0.45
SIL1-210ENST00000508639 MICAL3Q7RTP6 2002 aa12.23□□□□□ -0.45
SIL1-210ENST00000508639 MYCLP12524 364 aaPredicted RBP12.22□□□□□ -0.45
SIL1-210ENST00000508639 UBA1P22314 1058 aaKnown RBP12.22□□□□□ -0.45
SIL1-210ENST00000508639 NT5C2P49902 561 aa12.22□□□□□ -0.45
SIL1-210ENST00000508639 LAMC2Q13753 1193 aa12.22□□□□□ -0.45
SIL1-210ENST00000508639 DGKDQ16760 1214 aa12.22□□□□□ -0.45
SIL1-210ENST00000508639 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.22□□□□□ -0.454e-6■■■□□ 19.2
SIL1-210ENST00000508639 LRRC8DQ7L1W4 858 aa12.22□□□□□ -0.45
SIL1-210ENST00000508639 MICALL1Q8N3F8 863 aa12.22□□□□□ -0.45
SIL1-210ENST00000508639 CAGE1Q8TC20 777 aa12.22□□□□□ -0.45
SIL1-210ENST00000508639 KHSRPQ92945 711 aaKnown RBP eCLIP12.22□□□□□ -0.45
SIL1-210ENST00000508639 CTNNA3Q9UI47 895 aa12.22□□□□□ -0.45
SIL1-210ENST00000508639 FRMPD4Q14CM0 1322 aa12.21□□□□□ -0.45
SIL1-210ENST00000508639 RAD50Q92878 1312 aa12.21□□□□□ -0.45
SIL1-210ENST00000508639 E7EWF7 191 aa12.21□□□□□ -0.45
SIL1-210ENST00000508639 HIP1O00291 1037 aa12.21□□□□□ -0.45
SIL1-210ENST00000508639 TLL1O43897 1013 aa12.21□□□□□ -0.45
SIL1-210ENST00000508639 DHX16O60231 1041 aaKnown RBP12.21□□□□□ -0.45
SIL1-210ENST00000508639 PPFIA4O75335 1185 aa12.21□□□□□ -0.45
SIL1-210ENST00000508639 GGPS1O95749 300 aa12.21□□□□□ -0.45
SIL1-210ENST00000508639 PTK7Q13308 1070 aa12.21□□□□□ -0.45
SIL1-210ENST00000508639 BRDTQ58F21 947 aaPredicted RBP12.21□□□□□ -0.45
SIL1-210ENST00000508639 DHX37Q8IY37 1157 aaKnown RBP12.21□□□□□ -0.45
SIL1-210ENST00000508639 MB21D2Q8IYB1 491 aaPredicted RBP12.21□□□□□ -0.45
SIL1-210ENST00000508639 ARNTL2Q8WYA1 636 aa12.21□□□□□ -0.45
SIL1-210ENST00000508639 CNNM2Q9H8M5 875 aa12.21□□□□□ -0.45
SIL1-210ENST00000508639 SUGCTQ9HAC7 445 aa12.21□□□□□ -0.45
SIL1-210ENST00000508639 SUPT16HQ9Y5B9 1047 aaKnown RBP12.21□□□□□ -0.45
SIL1-210ENST00000508639 MRVI1Q9Y6F6 885 aa12.21□□□□□ -0.45
SIL1-210ENST00000508639 B4DLN1 442 aa12.2□□□□□ -0.46
SIL1-210ENST00000508639 SGSM2O43147 1006 aa12.2□□□□□ -0.46
SIL1-210ENST00000508639 LGR5O75473 907 aa12.2□□□□□ -0.46
SIL1-210ENST00000508639 BAIAP3O94812 1187 aa12.2□□□□□ -0.46
SIL1-210ENST00000508639 ACTN1P12814 892 aa12.2□□□□□ -0.46
SIL1-210ENST00000508639 MRPL12P52815 198 aaKnown RBP12.2□□□□□ -0.46
SIL1-210ENST00000508639 ADAM17P78536 824 aa12.2□□□□□ -0.46
SIL1-210ENST00000508639 CNKSR3Q6P9H4 555 aa12.2□□□□□ -0.46
SIL1-210ENST00000508639 SERINC5Q86VE9 423 aa12.2□□□□□ -0.46
SIL1-210ENST00000508639 HOMER1Q86YM7 354 aa12.2□□□□□ -0.46
SIL1-210ENST00000508639 DBF4BQ8NFT6 615 aa12.2□□□□□ -0.46
SIL1-210ENST00000508639 MAP4K1Q92918 833 aa12.2□□□□□ -0.46
SIL1-210ENST00000508639 UHRF1Q96T88 793 aaPredicted RBP12.2□□□□□ -0.46
SIL1-210ENST00000508639 MPHOSPH6Q99547 160 aaKnown RBP12.2□□□□□ -0.46
SIL1-210ENST00000508639 UBAC1Q9BSL1 405 aa12.2□□□□□ -0.46
SIL1-210ENST00000508639 MYL10Q9BUA6 226 aa12.2□□□□□ -0.46
SIL1-210ENST00000508639 RNPEPQ9H4A4 650 aa12.2□□□□□ -0.46
SIL1-210ENST00000508639 CD320Q9NPF0 282 aa12.2□□□□□ -0.46
SIL1-210ENST00000508639 MAP3K20Q9NYL2 800 aaKnown RBP12.2□□□□□ -0.46
SIL1-210ENST00000508639 SIP14410 1827 aa12.2□□□□□ -0.46
SIL1-210ENST00000508639 ATG2AQ2TAZ0 1938 aa12.19□□□□□ -0.46
SIL1-210ENST00000508639 PNMA6FA0A0J9YX94 578 aa12.19□□□□□ -0.46
SIL1-210ENST00000508639 LINC01553A4QN01 128 aa12.19□□□□□ -0.46
SIL1-210ENST00000508639 SPATA31C2B4DYI2 1134 aa12.19□□□□□ -0.46
SIL1-210ENST00000508639 MEIS2O14770 477 aa12.19□□□□□ -0.46
SIL1-210ENST00000508639 IFIT3O14879 490 aaKnown RBP12.19□□□□□ -0.46
SIL1-210ENST00000508639 TREHO43280 583 aa12.19□□□□□ -0.46
SIL1-210ENST00000508639 GJB5O95377 273 aa12.19□□□□□ -0.46
SIL1-210ENST00000508639 ICAM3P32942 547 aa12.19□□□□□ -0.46
SIL1-210ENST00000508639 IRX6P78412 446 aaPredicted RBP12.19□□□□□ -0.46
SIL1-210ENST00000508639 USP17L6PQ6QN14 398 aa12.19□□□□□ -0.46
SIL1-210ENST00000508639 FCHSD1Q86WN1 690 aa12.19□□□□□ -0.46
SIL1-210ENST00000508639 SAMD3Q8N6K7 520 aa12.19□□□□□ -0.46
SIL1-210ENST00000508639 C7orf31Q8N865 590 aa12.19□□□□□ -0.46
SIL1-210ENST00000508639 SPATA33Q96N06 139 aa12.19□□□□□ -0.46
SIL1-210ENST00000508639 INPP4AQ96PE3 977 aaPredicted RBP12.19□□□□□ -0.46
SIL1-210ENST00000508639 LY9Q9HBG7 655 aa12.19□□□□□ -0.46
SIL1-210ENST00000508639 RTEL1Q9NZ71 1219 aa12.19□□□□□ -0.46
SIL1-210ENST00000508639 NOD1Q9Y239 953 aa12.19□□□□□ -0.46
SIL1-210ENST00000508639 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.18□□□□□ -0.46
SIL1-210ENST00000508639 GCOM1H8Y6P7 765 aaPredicted RBP12.18□□□□□ -0.46
SIL1-210ENST00000508639 ATP9AO75110 1047 aa12.18□□□□□ -0.46
SIL1-210ENST00000508639 LGALS2P05162 132 aa12.18□□□□□ -0.46
SIL1-210ENST00000508639 POLR2MP0CAP2 368 aa12.18□□□□□ -0.46
SIL1-210ENST00000508639 TGFB3P10600 412 aa12.18□□□□□ -0.46
SIL1-210ENST00000508639 COL9A1P20849 921 aa12.18□□□□□ -0.46
SIL1-210ENST00000508639 ERVK-21P61565 698 aa12.18□□□□□ -0.46
SIL1-210ENST00000508639 PLEKHG4Q58EX7 1191 aa12.18□□□□□ -0.46
SIL1-210ENST00000508639 FAM117BQ6P1L5 589 aa12.18□□□□□ -0.46
SIL1-210ENST00000508639 SKAP1Q86WV1 359 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms