RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 TIFAQ96CG3 184 aa12.01□□□□□ -0.49
NR1I3-222ENST00000506018 SPATA33Q96N06 139 aa12.01□□□□□ -0.49
NR1I3-222ENST00000506018 NEK1Q96PY6 1258 aa12.01□□□□□ -0.49
NR1I3-222ENST00000506018 CDX2Q99626 313 aaPredicted RBP12.01□□□□□ -0.49
NR1I3-222ENST00000506018 MYL10Q9BUA6 226 aa12.01□□□□□ -0.49
NR1I3-222ENST00000506018 WNT8AQ9H1J5 351 aa12.01□□□□□ -0.49
NR1I3-222ENST00000506018 RBM28Q9NW13 759 aaKnown RBP12.01□□□□□ -0.49
NR1I3-222ENST00000506018 SLC4A7Q9Y6M7 1214 aa12.01□□□□□ -0.49
NR1I3-222ENST00000506018 NOP56O00567 594 aaKnown RBP12□□□□□ -0.49
NR1I3-222ENST00000506018 PARNO95453 639 aaKnown RBP12□□□□□ -0.49
NR1I3-222ENST00000506018 GGPS1O95749 300 aa12□□□□□ -0.49
NR1I3-222ENST00000506018 HMGB1P09429 215 aaKnown RBP12□□□□□ -0.49
NR1I3-222ENST00000506018 FOSL2P15408 326 aa12□□□□□ -0.49
NR1I3-222ENST00000506018 FGD1P98174 961 aa12□□□□□ -0.49
NR1I3-222ENST00000506018 NEDD9Q14511 834 aa12□□□□□ -0.49
NR1I3-222ENST00000506018 CELF3Q5SZQ8 465 aaKnown RBP12□□□□□ -0.49
NR1I3-222ENST00000506018 RASIP1Q5U651 963 aa12□□□□□ -0.49
NR1I3-222ENST00000506018 MYSM1Q5VVJ2 828 aa12□□□□□ -0.49
NR1I3-222ENST00000506018 SGMS1Q86VZ5 419 aa12□□□□□ -0.49
NR1I3-222ENST00000506018 FANCBQ8NB91 859 aa12□□□□□ -0.49
NR1I3-222ENST00000506018 SCLYQ96I15 445 aa12□□□□□ -0.49
NR1I3-222ENST00000506018 EHMT1Q9H9B1 1298 aa12□□□□□ -0.49
NR1I3-222ENST00000506018 COL6A3P12111 3177 aa12□□□□□ -0.49
NR1I3-222ENST00000506018 DOCK5Q9H7D0 1870 aa11.99□□□□□ -0.49
NR1I3-222ENST00000506018 PIK3CDO00329 1044 aa11.99□□□□□ -0.49
NR1I3-222ENST00000506018 FIBPO43427 364 aa11.99□□□□□ -0.49
NR1I3-222ENST00000506018 F2P00734 622 aa11.99□□□□□ -0.49
NR1I3-222ENST00000506018 UBA1P22314 1058 aaKnown RBP11.99□□□□□ -0.49
NR1I3-222ENST00000506018 PSEN2P49810 448 aa11.99□□□□□ -0.49
NR1I3-222ENST00000506018 MFSD10Q14728 455 aa11.99□□□□□ -0.49
NR1I3-222ENST00000506018 SLC35G1Q2M3R5 365 aa11.99□□□□□ -0.49
NR1I3-222ENST00000506018 DEFB128Q7Z7B8 93 aa11.99□□□□□ -0.49
NR1I3-222ENST00000506018 NLRX1Q86UT6 975 aa11.99□□□□□ -0.49
NR1I3-222ENST00000506018 MICU3Q86XE3 530 aa11.99□□□□□ -0.49
NR1I3-222ENST00000506018 GIMAP8Q8ND71 665 aaPredicted RBP11.99□□□□□ -0.49
NR1I3-222ENST00000506018 AFAP1L1Q8TED9 768 aa11.99□□□□□ -0.49
NR1I3-222ENST00000506018 GAS2L1Q99501 681 aaPredicted RBP11.99□□□□□ -0.49
NR1I3-222ENST00000506018 ALG1Q9BT22 464 aa11.99□□□□□ -0.49
NR1I3-222ENST00000506018 PBX4Q9BYU1 374 aa11.99□□□□□ -0.49
NR1I3-222ENST00000506018 FTOQ9C0B1 505 aaKnown RBP eCLIP11.99□□□□□ -0.49
NR1I3-222ENST00000506018 TTYH1Q9H313 450 aaPredicted RBP11.99□□□□□ -0.49
NR1I3-222ENST00000506018 ZNF576Q9H609 170 aa11.99□□□□□ -0.49
NR1I3-222ENST00000506018 PSTPIP2Q9H939 334 aa11.99□□□□□ -0.49
NR1I3-222ENST00000506018 GTF2IRD1Q9UHL9 959 aa11.99□□□□□ -0.49
NR1I3-222ENST00000506018 FRMPD4Q14CM0 1322 aa11.98□□□□□ -0.49
NR1I3-222ENST00000506018 SPDYE3A6NKU9 549 aa11.98□□□□□ -0.49
NR1I3-222ENST00000506018 PLEKHA8P1O95397 391 aa11.98□□□□□ -0.49
NR1I3-222ENST00000506018 IQCF3P0C7M6 154 aa11.98□□□□□ -0.49
NR1I3-222ENST00000506018 RXRAP19793 462 aa11.98□□□□□ -0.49
NR1I3-222ENST00000506018 ICAM3P32942 547 aa11.98□□□□□ -0.49
NR1I3-222ENST00000506018 KIAA0753Q2KHM9 967 aa11.98□□□□□ -0.49
NR1I3-222ENST00000506018 PCNX4Q63HM2 1172 aa11.98□□□□□ -0.49
NR1I3-222ENST00000506018 DHX32Q7L7V1 743 aaKnown RBP11.98□□□□□ -0.49
NR1I3-222ENST00000506018 TEX2Q8IWB9 1127 aa11.98□□□□□ -0.49
NR1I3-222ENST00000506018 SRBD1Q8N5C6 995 aaKnown RBP11.98□□□□□ -0.49
NR1I3-222ENST00000506018 MAFAQ8NHW3 353 aaPredicted RBP11.98□□□□□ -0.49
NR1I3-222ENST00000506018 IL31RAQ8NI17 732 aa11.98□□□□□ -0.49
NR1I3-222ENST00000506018 MYLIPQ8WY64 445 aa11.98□□□□□ -0.49
NR1I3-222ENST00000506018 CDHR1Q96JP9 859 aa11.98□□□□□ -0.49
NR1I3-222ENST00000506018 LRRC2Q9BYS8 371 aa11.98□□□□□ -0.49
NR1I3-222ENST00000506018 SLC28A3Q9HAS3 691 aa11.98□□□□□ -0.49
NR1I3-222ENST00000506018 KIF28PB7ZC32 967 aa11.97□□□□□ -0.49
NR1I3-222ENST00000506018 ZBTB43O43298 467 aa11.97□□□□□ -0.49
NR1I3-222ENST00000506018 RGS20O76081 388 aa11.97□□□□□ -0.49
NR1I3-222ENST00000506018 BAIAP3O94812 1187 aa11.97□□□□□ -0.49
NR1I3-222ENST00000506018 ZNF286BP0CG31 522 aa11.97□□□□□ -0.49
NR1I3-222ENST00000506018 HOXD8P13378 290 aaPredicted RBP11.97□□□□□ -0.49
NR1I3-222ENST00000506018 SELPP16109 830 aa11.97□□□□□ -0.49
NR1I3-222ENST00000506018 ATP2A2P16615 1042 aaKnown RBP11.97□□□□□ -0.49
NR1I3-222ENST00000506018 TSGA10IPQ3SY00 556 aa11.97□□□□□ -0.49
NR1I3-222ENST00000506018 GDF6Q6KF10 455 aaPredicted RBP11.97□□□□□ -0.49
NR1I3-222ENST00000506018 USP17L6PQ6QN14 398 aa11.97□□□□□ -0.49
NR1I3-222ENST00000506018 METTL7BQ6UX53 244 aa11.97□□□□□ -0.49
NR1I3-222ENST00000506018 TMTC3Q6ZXV5 915 aa11.97□□□□□ -0.49
NR1I3-222ENST00000506018 CCDC82Q8N4S0 544 aa11.97□□□□□ -0.49
NR1I3-222ENST00000506018 KAT2BQ92831 832 aa11.97□□□□□ -0.49
NR1I3-222ENST00000506018 INPP4AQ96PE3 977 aaPredicted RBP11.97□□□□□ -0.49
NR1I3-222ENST00000506018 SLC9A7Q96T83 725 aa11.97□□□□□ -0.49
NR1I3-222ENST00000506018 USP26Q9BXU7 913 aa11.97□□□□□ -0.49
NR1I3-222ENST00000506018 CXXC1Q9P0U4 656 aaPredicted RBP11.97□□□□□ -0.49
NR1I3-222ENST00000506018 HDAC6Q9UBN7 1215 aa11.97□□□□□ -0.49
NR1I3-222ENST00000506018 ZNF215Q9UL58 517 aaPredicted RBP11.97□□□□□ -0.49
NR1I3-222ENST00000506018 CCDC196A0A1B0GTZ2 297 aa11.96□□□□□ -0.49
NR1I3-222ENST00000506018 GRXCR1A8MXD5 290 aa11.96□□□□□ -0.49
NR1I3-222ENST00000506018 SPATA31C2B4DYI2 1134 aa11.96□□□□□ -0.49
NR1I3-222ENST00000506018 H3BRB1 525 aa11.96□□□□□ -0.49
NR1I3-222ENST00000506018 hCG_1984214I3L0E3 225 aa11.96□□□□□ -0.49
NR1I3-222ENST00000506018 HAS3O00219 553 aa11.96□□□□□ -0.49
NR1I3-222ENST00000506018 MEIS2O14770 477 aa11.96□□□□□ -0.49
NR1I3-222ENST00000506018 SORBS3O60504 671 aa11.96□□□□□ -0.49
NR1I3-222ENST00000506018 REC8O95072 547 aa11.96□□□□□ -0.49
NR1I3-222ENST00000506018 GNAT1P11488 350 aa11.96□□□□□ -0.49
NR1I3-222ENST00000506018 KCNJ6P48051 423 aa11.96□□□□□ -0.49
NR1I3-222ENST00000506018 RCAN1P53805 252 aa11.96□□□□□ -0.49
NR1I3-222ENST00000506018 PTK7Q13308 1070 aa11.96□□□□□ -0.49
NR1I3-222ENST00000506018 RTN1Q16799 776 aa11.96□□□□□ -0.49
NR1I3-222ENST00000506018 HSDL1Q3SXM5 330 aa11.96□□□□□ -0.49
NR1I3-222ENST00000506018 APOA5Q6Q788 366 aa11.96□□□□□ -0.49
NR1I3-222ENST00000506018 LRRC8DQ7L1W4 858 aa11.96□□□□□ -0.49
NR1I3-222ENST00000506018 HEATR3Q7Z4Q2 680 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms