RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 FAM169BQ8N8A8 192 aa5.27□□□□□ -1.57
RFC1-208ENST00000504849 LINC00116Q8NCU8 138 aa5.27□□□□□ -1.57
RFC1-208ENST00000504849 NAF1Q96HR8 494 aaKnown RBP5.27□□□□□ -1.57
RFC1-208ENST00000504849 FCRL2Q96LA5 508 aaPredicted RBP5.27□□□□□ -1.57
RFC1-208ENST00000504849 FERD3LQ96RJ6 166 aa5.27□□□□□ -1.57
RFC1-208ENST00000504849 GABBR1Q9UBS5 961 aa5.27□□□□□ -1.57
RFC1-208ENST00000504849 PPT2Q9UMR5 302 aa5.27□□□□□ -1.57
RFC1-208ENST00000504849 CCDC7Q96M83 1385 aa5.27□□□□□ -1.57
RFC1-208ENST00000504849 KDM6BO15054 1643 aa5.26□□□□□ -1.57
RFC1-208ENST00000504849 WASHC2AQ641Q2 1341 aa5.26□□□□□ -1.57
RFC1-208ENST00000504849 SUPT6HQ7KZ85 1726 aaKnown RBP5.26□□□□□ -1.57
RFC1-208ENST00000504849 NCOA1Q15788 1441 aa5.26□□□□□ -1.57
RFC1-208ENST00000504849 MC3RP41968 323 aa5.26□□□□□ -1.57
RFC1-208ENST00000504849 CASP7P55210 303 aa5.26□□□□□ -1.57
RFC1-208ENST00000504849 INHBEP58166 350 aa5.26□□□□□ -1.57
RFC1-208ENST00000504849 IRX6P78412 446 aaPredicted RBP5.26□□□□□ -1.57
RFC1-208ENST00000504849 MPP2Q14168 576 aa5.26□□□□□ -1.57
RFC1-208ENST00000504849 TKFCQ3LXA3 575 aa5.26□□□□□ -1.57
RFC1-208ENST00000504849 SEZ6Q53EL9 994 aa5.26□□□□□ -1.57
RFC1-208ENST00000504849 DALRD3Q5D0E6 543 aaKnown RBP5.26□□□□□ -1.57
RFC1-208ENST00000504849 CCDC81Q6ZN84 652 aa5.26□□□□□ -1.57
RFC1-208ENST00000504849 LIMS2Q7Z4I7 341 aa5.26□□□□□ -1.57
RFC1-208ENST00000504849 RBBP8NLQ8NC74 664 aaPredicted RBP5.26□□□□□ -1.57
RFC1-208ENST00000504849 DAGLBQ8NCG7 672 aa5.26□□□□□ -1.57
RFC1-208ENST00000504849 ST13P5Q8NFI4 369 aaPredicted RBP5.26□□□□□ -1.57
RFC1-208ENST00000504849 PMM1Q92871 262 aa5.26□□□□□ -1.57
RFC1-208ENST00000504849 SGSM3Q96HU1 749 aa5.26□□□□□ -1.57
RFC1-208ENST00000504849 IPO9Q96P70 1041 aaKnown RBP5.26□□□□□ -1.57
RFC1-208ENST00000504849 CD248Q9HCU0 757 aa5.26□□□□□ -1.57
RFC1-208ENST00000504849 SPATA6Q9NWH7 488 aaPredicted RBP5.26□□□□□ -1.57
RFC1-208ENST00000504849 TLR6Q9Y2C9 796 aa5.26□□□□□ -1.57
RFC1-208ENST00000504849 ATP8A1Q9Y2Q0 1164 aa5.26□□□□□ -1.57
RFC1-208ENST00000504849 ABCA10Q8WWZ4 1543 aa5.26□□□□□ -1.57
RFC1-208ENST00000504849 ZNF608Q9ULD9 1512 aaPredicted RBP5.26□□□□□ -1.57
RFC1-208ENST00000504849 TCOF1Q13428 1488 aaKnown RBP5.26□□□□□ -1.57
RFC1-208ENST00000504849 SNAPC4Q5SXM2 1469 aa5.26□□□□□ -1.57
RFC1-208ENST00000504849 ALG1L2C9J202 215 aa5.25□□□□□ -1.57
RFC1-208ENST00000504849 KIF3BO15066 747 aa5.25□□□□□ -1.57
RFC1-208ENST00000504849 TFE3P19532 575 aaPredicted RBP5.25□□□□□ -1.57
RFC1-208ENST00000504849 PCBP3P57721 371 aaKnown RBP5.25□□□□□ -1.57
RFC1-208ENST00000504849 ICAM4Q14773 271 aa5.25□□□□□ -1.57
RFC1-208ENST00000504849 CWF19L2Q2TBE0 894 aaKnown RBP5.25□□□□□ -1.57
RFC1-208ENST00000504849 ZC3H12BQ5HYM0 836 aaKnown RBP5.25□□□□□ -1.57
RFC1-208ENST00000504849 TTBK2Q6IQ55 1244 aa5.25□□□□□ -1.57
RFC1-208ENST00000504849 C19orf47Q8N9M1 422 aaKnown RBP5.25□□□□□ -1.57
RFC1-208ENST00000504849 NUP43Q8NFH3 380 aa5.25□□□□□ -1.57
RFC1-208ENST00000504849 GATAD2BQ8WXI9 593 aa5.25□□□□□ -1.57
RFC1-208ENST00000504849 KLC2Q9H0B6 622 aa5.25□□□□□ -1.57
RFC1-208ENST00000504849 PRKRIP1Q9H875 184 aaPredicted RBP5.25□□□□□ -1.57
RFC1-208ENST00000504849 ST7Q9NRC1 585 aa5.25□□□□□ -1.57
RFC1-208ENST00000504849 ZNRF3Q9ULT6 936 aa5.25□□□□□ -1.57
RFC1-208ENST00000504849 NUDCQ9Y266 331 aa5.25□□□□□ -1.57
RFC1-208ENST00000504849 EID1Q9Y6B2 187 aa5.25□□□□□ -1.57
RFC1-208ENST00000504849 GAPVD1Q14C86 1478 aa5.25□□□□□ -1.57
RFC1-208ENST00000504849 DNMBPQ6XZF7 1577 aa5.25□□□□□ -1.57
RFC1-208ENST00000504849 GCC2Q8IWJ2 1684 aa5.24□□□□□ -1.57
RFC1-208ENST00000504849 KDM2BQ8NHM5 1336 aa5.24□□□□□ -1.57
RFC1-208ENST00000504849 MIA2Q96PC5 1412 aa5.24□□□□□ -1.57
RFC1-208ENST00000504849 KDM5BQ9UGL1 1544 aa5.24□□□□□ -1.57
RFC1-208ENST00000504849 KCNQ2O43526 872 aa5.24□□□□□ -1.57
RFC1-208ENST00000504849 PDE4BQ07343 736 aa5.24□□□□□ -1.57
RFC1-208ENST00000504849 NR1I3Q14994 352 aa5.24□□□□□ -1.57
RFC1-208ENST00000504849 LONRF2Q1L5Z9 754 aa5.24□□□□□ -1.57
RFC1-208ENST00000504849 FAM9BQ8IZU0 186 aa5.24□□□□□ -1.57
RFC1-208ENST00000504849 FAM13CQ8NE31 585 aa5.24□□□□□ -1.57
RFC1-208ENST00000504849 ZSWIM2Q8NEG5 633 aa5.24□□□□□ -1.57
RFC1-208ENST00000504849 CHAC2Q8WUX2 184 aa5.24□□□□□ -1.57
RFC1-208ENST00000504849 ERVK13-1Q9NX77 482 aa5.24□□□□□ -1.57
RFC1-208ENST00000504849 CORINQ9Y5Q5 1042 aa5.24□□□□□ -1.57
RFC1-208ENST00000504849 PTCH2Q9Y6C5 1203 aa5.24□□□□□ -1.57
RFC1-208ENST00000504849 ROCK2O75116 1388 aaKnown RBP5.24□□□□□ -1.57
RFC1-208ENST00000504849 CTTNBP2Q8WZ74 1663 aa5.24□□□□□ -1.57
RFC1-208ENST00000504849 UGGT2Q9NYU1 1516 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 CCDC163A0A0D9SF12 145 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 TCERG1O14776 1098 aaKnown RBP5.23□□□□□ -1.57
RFC1-208ENST00000504849 ASMTLO95671 621 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 SYPP08247 313 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 LMNB1P20700 586 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 CNGA1P29973 690 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 MCM4P33991 863 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 STAT3P40763 770 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 SARSP49591 514 aaKnown RBP5.23□□□□□ -1.57
RFC1-208ENST00000504849 RHBDL3P58872 404 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 KRTAP10-9P60411 292 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 TGFB2P61812 414 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 BIRC2Q13490 618 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 FHL2Q14192 279 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 R3HDM1Q15032 1099 aaKnown RBP5.23□□□□□ -1.57
RFC1-208ENST00000504849 TM4SF20Q53R12 229 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 LARP1BQ659C4 914 aaKnown RBP5.23□□□□□ -1.57
RFC1-208ENST00000504849 SLFN12Q8IYM2 578 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 ZNF655Q8N720 491 aaPredicted RBP5.23□□□□□ -1.57
RFC1-208ENST00000504849 MFSD3Q96ES6 412 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 RNF38Q9H0F5 515 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 PRDM16Q9HAZ2 1276 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 IMPACTQ9P2X3 320 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 MCM8Q9UJA3 840 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 INVSQ9Y283 1065 aa5.23□□□□□ -1.57
RFC1-208ENST00000504849 THRAP3Q9Y2W1 955 aaKnown RBP5.23□□□□□ -1.57
RFC1-208ENST00000504849 KTN1Q86UP2 1357 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms