RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 TMEM63BQ5T3F8 832 aa12.68□□□□□ -0.38
VCAN-205ENST00000503923 NIPA1Q7RTP0 329 aa12.68□□□□□ -0.38
VCAN-205ENST00000503923 OR6J1Q8NGC5 347 aa12.68□□□□□ -0.38
VCAN-205ENST00000503923 TBCKQ8TEA7 893 aa12.68□□□□□ -0.38
VCAN-205ENST00000503923 KBTBD13C9JR72 458 aa12.67□□□□□ -0.38
VCAN-205ENST00000503923 FARP2O94887 1054 aaPredicted RBP12.67□□□□□ -0.38
VCAN-205ENST00000503923 GH1P01241 217 aa12.67□□□□□ -0.38
VCAN-205ENST00000503923 MYCNP04198 464 aaPredicted RBP12.67□□□□□ -0.38
VCAN-205ENST00000503923 C6orf222P0C671 652 aaPredicted RBP12.67□□□□□ -0.38
VCAN-205ENST00000503923 CST5P28325 142 aaPredicted RBP12.67□□□□□ -0.38
VCAN-205ENST00000503923 CIITAP33076 1130 aa12.67□□□□□ -0.38
VCAN-205ENST00000503923 NKX3-2P78367 333 aa12.67□□□□□ -0.38
VCAN-205ENST00000503923 NR5A1Q13285 461 aa12.67□□□□□ -0.38
VCAN-205ENST00000503923 GNL2Q13823 731 aaKnown RBP12.67□□□□□ -0.38
VCAN-205ENST00000503923 NEDD9Q14511 834 aa12.67□□□□□ -0.38
VCAN-205ENST00000503923 GJC2Q5T442 439 aaPredicted RBP12.67□□□□□ -0.38
VCAN-205ENST00000503923 PIK3AP1Q6ZUJ8 805 aa12.67□□□□□ -0.38
VCAN-205ENST00000503923 KLHDC9Q8NEP7 349 aa12.67□□□□□ -0.38
VCAN-205ENST00000503923 COPS5Q92905 334 aa12.67□□□□□ -0.38
VCAN-205ENST00000503923 TNFRSF25Q93038 417 aa12.67□□□□□ -0.38
VCAN-205ENST00000503923 SENP7Q9BQF6 1050 aa12.67□□□□□ -0.38
VCAN-205ENST00000503923 FAM86B1E9PN63 330 aa12.66□□□□□ -0.38
VCAN-205ENST00000503923 H3BQV1 296 aa12.66□□□□□ -0.38
VCAN-205ENST00000503923 MEIS1O00470 390 aa12.66□□□□□ -0.38
VCAN-205ENST00000503923 ZEB2O60315 1214 aa12.66□□□□□ -0.38
VCAN-205ENST00000503923 CAPN15O75808 1086 aa12.66□□□□□ -0.38
VCAN-205ENST00000503923 HSP90AA1P07900 732 aaKnown RBP12.66□□□□□ -0.38
VCAN-205ENST00000503923 FAM86B2P0C5J1 330 aa12.66□□□□□ -0.38
VCAN-205ENST00000503923 UBA1P22314 1058 aaKnown RBP12.66□□□□□ -0.38
VCAN-205ENST00000503923 PTGS1P23219 599 aa12.66□□□□□ -0.38
VCAN-205ENST00000503923 MNX1P50219 401 aaPredicted RBP12.66□□□□□ -0.38
VCAN-205ENST00000503923 CPT1AP50416 773 aa12.66□□□□□ -0.38
VCAN-205ENST00000503923 SETQ01105 290 aaPredicted RBP12.66□□□□□ -0.38
VCAN-205ENST00000503923 ARHGAP1Q07960 439 aa12.66□□□□□ -0.38
VCAN-205ENST00000503923 SEMA3FQ13275 785 aa12.66□□□□□ -0.38
VCAN-205ENST00000503923 LAMC2Q13753 1193 aa12.66□□□□□ -0.38
VCAN-205ENST00000503923 FSCN1Q16658 493 aaKnown RBP12.66□□□□□ -0.38
VCAN-205ENST00000503923 INF2Q27J81 1249 aa12.66□□□□□ -0.38
VCAN-205ENST00000503923 BRDTQ58F21 947 aaPredicted RBP12.66□□□□□ -0.38
VCAN-205ENST00000503923 GNASQ5JWF2 1037 aa12.66□□□□□ -0.38
VCAN-205ENST00000503923 IFFO2Q5TF58 517 aa12.66□□□□□ -0.38
VCAN-205ENST00000503923 LARP1BQ659C4 914 aaKnown RBP12.66□□□□□ -0.38
VCAN-205ENST00000503923 MOXD1Q6UVY6 613 aa12.66□□□□□ -0.38
VCAN-205ENST00000503923 NEK8Q86SG6 692 aa12.66□□□□□ -0.38
VCAN-205ENST00000503923 PLA2G4DQ86XP0 818 aa12.66□□□□□ -0.38
VCAN-205ENST00000503923 DHX37Q8IY37 1157 aaKnown RBP12.66□□□□□ -0.38
VCAN-205ENST00000503923 PCSK9Q8NBP7 692 aaKnown RBP12.66□□□□□ -0.38
VCAN-205ENST00000503923 GIMAP8Q8ND71 665 aaPredicted RBP12.66□□□□□ -0.38
VCAN-205ENST00000503923 CYP2W1Q8TAV3 490 aa12.66□□□□□ -0.38
VCAN-205ENST00000503923 EMID1Q96A84 441 aaPredicted RBP12.66□□□□□ -0.38
VCAN-205ENST00000503923 NAP1L4Q99733 375 aaKnown RBP12.66□□□□□ -0.38
VCAN-205ENST00000503923 TSEN34Q9BSV6 310 aaKnown RBP12.66□□□□□ -0.38
VCAN-205ENST00000503923 FOXP1Q9H334 677 aaPredicted RBP12.66□□□□□ -0.38
VCAN-205ENST00000503923 KCNH7Q9NS40 1196 aa12.66□□□□□ -0.38
VCAN-205ENST00000503923 IGLV3-22A0A075B6J6 115 aa12.65□□□□□ -0.38
VCAN-205ENST00000503923 CYP3A7-CYP3A51PA0A087WV96 503 aa12.65□□□□□ -0.38
VCAN-205ENST00000503923 MYADML2A6NDP7 307 aa12.65□□□□□ -0.38
VCAN-205ENST00000503923 MOXD2PA6NHM9 499 aa12.65□□□□□ -0.38
VCAN-205ENST00000503923 CTAGE5O15320 804 aa12.65□□□□□ -0.38
VCAN-205ENST00000503923 EDIL3O43854 480 aa12.65□□□□□ -0.38
VCAN-205ENST00000503923 GGPS1O95749 300 aa12.65□□□□□ -0.38
VCAN-205ENST00000503923 PDCP20941 246 aa12.65□□□□□ -0.38
VCAN-205ENST00000503923 CYP3A7P24462 503 aa12.65□□□□□ -0.38
VCAN-205ENST00000503923 SP2Q02086 613 aa12.65□□□□□ -0.38
VCAN-205ENST00000503923 EARS2Q5JPH6 523 aaKnown RBP12.65□□□□□ -0.38
VCAN-205ENST00000503923 CELF3Q5SZQ8 465 aaKnown RBP12.65□□□□□ -0.38
VCAN-205ENST00000503923 MYSM1Q5VVJ2 828 aa12.65□□□□□ -0.38
VCAN-205ENST00000503923 CCSAPQ6IQ19 270 aaPredicted RBP12.65□□□□□ -0.38
VCAN-205ENST00000503923 METTL7BQ6UX53 244 aa12.65□□□□□ -0.38
VCAN-205ENST00000503923 NECAB2Q7Z6G3 386 aa12.65□□□□□ -0.38
VCAN-205ENST00000503923 C11orf49Q9H6J7 331 aa12.65□□□□□ -0.38
VCAN-205ENST00000503923 MLXIPQ9HAP2 919 aa12.65□□□□□ -0.38
VCAN-205ENST00000503923 FOXD4L1Q9NU39 408 aa12.65□□□□□ -0.38
VCAN-205ENST00000503923 A6NJR5 290 aa12.64□□□□□ -0.39
VCAN-205ENST00000503923 ATP9AO75110 1047 aa12.64□□□□□ -0.39
VCAN-205ENST00000503923 ARP10275 920 aa12.64□□□□□ -0.39
VCAN-205ENST00000503923 GCFC2P16383 781 aaKnown RBP12.64□□□□□ -0.39
VCAN-205ENST00000503923 KCNA2P16389 499 aa12.64□□□□□ -0.39
VCAN-205ENST00000503923 IRX5P78411 483 aaPredicted RBP12.64□□□□□ -0.39
VCAN-205ENST00000503923 BEX3Q00994 111 aa12.64□□□□□ -0.39
VCAN-205ENST00000503923 BECN1Q14457 450 aa12.64□□□□□ -0.39
VCAN-205ENST00000503923 KCNA10Q16322 511 aa12.64□□□□□ -0.39
VCAN-205ENST00000503923 LETM2Q2VYF4 491 aa12.64□□□□□ -0.39
VCAN-205ENST00000503923 Q4G0T1 1027 aa12.64□□□□□ -0.39
VCAN-205ENST00000503923 PRR16Q569H4 304 aa12.64□□□□□ -0.39
VCAN-205ENST00000503923 PPP4R3AQ6IN85 833 aa12.64□□□□□ -0.39
VCAN-205ENST00000503923 CYFIP1Q7L576 1253 aa12.64□□□□□ -0.39
VCAN-205ENST00000503923 UBE2Q1Q7Z7E8 422 aa12.64□□□□□ -0.39
VCAN-205ENST00000503923 NOSTRINQ8IVI9 506 aa12.64□□□□□ -0.39
VCAN-205ENST00000503923 PPTC7Q8NI37 304 aa12.64□□□□□ -0.39
VCAN-205ENST00000503923 DIS3LQ8TF46 1054 aaKnown RBP12.64□□□□□ -0.39
VCAN-205ENST00000503923 AFG1LQ8WV93 481 aa12.64□□□□□ -0.39
VCAN-205ENST00000503923 PAWRQ96IZ0 340 aaKnown RBP12.64□□□□□ -0.39
VCAN-205ENST00000503923 MBOAT7Q96N66 472 aa12.64□□□□□ -0.39
VCAN-205ENST00000503923 SDF4Q9BRK5 362 aa12.64□□□□□ -0.39
VCAN-205ENST00000503923 AGO4Q9HCK5 861 aaKnown RBP12.64□□□□□ -0.39
VCAN-205ENST00000503923 PHF24Q9UPV7 400 aa12.64□□□□□ -0.39
VCAN-205ENST00000503923 FAM205CA6NFA0 338 aa12.63□□□□□ -0.39
VCAN-205ENST00000503923 KPNA6O60684 536 aa12.63□□□□□ -0.39
VCAN-205ENST00000503923 TDP2O95551 362 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms