RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 MSRAQ9UJ68 235 aa22.43■■□□□ 1.18
UBE2D3-215ENST00000503418 FRMPD4Q14CM0 1322 aa22.42■■□□□ 1.18
UBE2D3-215ENST00000503418 IQCF3P0C7M6 154 aa22.42■■□□□ 1.18
UBE2D3-215ENST00000503418 TGFB3P10600 412 aa22.42■■□□□ 1.18
UBE2D3-215ENST00000503418 SP2Q02086 613 aa22.42■■□□□ 1.18
UBE2D3-215ENST00000503418 KIAA0753Q2KHM9 967 aa22.42■■□□□ 1.18
UBE2D3-215ENST00000503418 HSDL1Q3SXM5 330 aa22.42■■□□□ 1.18
UBE2D3-215ENST00000503418 USP17L6PQ6QN14 398 aa22.42■■□□□ 1.18
UBE2D3-215ENST00000503418 SESTD1Q86VW0 696 aa22.42■■□□□ 1.18
UBE2D3-215ENST00000503418 CCDC82Q8N4S0 544 aa22.42■■□□□ 1.18
UBE2D3-215ENST00000503418 CCDC155Q8N6L0 562 aa22.42■■□□□ 1.18
UBE2D3-215ENST00000503418 MAFAQ8NHW3 353 aaPredicted RBP22.42■■□□□ 1.18
UBE2D3-215ENST00000503418 NEK1Q96PY6 1258 aa22.42■■□□□ 1.18
UBE2D3-215ENST00000503418 MLXIPQ9HAP2 919 aa22.42■■□□□ 1.18
UBE2D3-215ENST00000503418 HDAC6Q9UBN7 1215 aa22.42■■□□□ 1.18
UBE2D3-215ENST00000503418 SLC4A7Q9Y6M7 1214 aa22.42■■□□□ 1.18
UBE2D3-215ENST00000503418 DOCK5Q9H7D0 1870 aa22.41■■□□□ 1.18
UBE2D3-215ENST00000503418 hCG_1642624A0A1W2PR95 340 aa22.41■■□□□ 1.18
UBE2D3-215ENST00000503418 F2P00734 622 aa22.41■■□□□ 1.18
UBE2D3-215ENST00000503418 RFC2P35250 354 aa22.41■■□□□ 1.18
UBE2D3-215ENST00000503418 MRPS9P82933 396 aaKnown RBP22.41■■□□□ 1.18
UBE2D3-215ENST00000503418 RAB30Q15771 203 aa22.41■■□□□ 1.18
UBE2D3-215ENST00000503418 GNPTABQ3T906 1256 aa22.41■■□□□ 1.18
UBE2D3-215ENST00000503418 SYNE3Q6ZMZ3 975 aa22.41■■□□□ 1.18
UBE2D3-215ENST00000503418 CCDC136Q96JN2 1154 aa22.41■■□□□ 1.18
UBE2D3-215ENST00000503418 RTEL1Q9NZ71 1219 aa22.41■■□□□ 1.18
UBE2D3-215ENST00000503418 GTF2IRD1Q9UHL9 959 aa22.41■■□□□ 1.18
UBE2D3-215ENST00000503418 STAM2O75886 525 aa22.4■■□□□ 1.18
UBE2D3-215ENST00000503418 TMTC3Q6ZXV5 915 aa22.4■■□□□ 1.18
UBE2D3-215ENST00000503418 FANCBQ8NB91 859 aa22.4■■□□□ 1.18
UBE2D3-215ENST00000503418 CAGE1Q8TC20 777 aa22.4■■□□□ 1.18
UBE2D3-215ENST00000503418 TCEANC2Q96MN5 208 aa22.4■■□□□ 1.18
UBE2D3-215ENST00000503418 FTOQ9C0B1 505 aaKnown RBP eCLIP22.4■■□□□ 1.188e-9■□□□□ 8.1
UBE2D3-215ENST00000503418 NKX2-4Q9H2Z4 354 aa22.4■■□□□ 1.18
UBE2D3-215ENST00000503418 EYSQ5T1H1 3165 aa22.39■■□□□ 1.18
UBE2D3-215ENST00000503418 MEIS2O14770 477 aa22.39■■□□□ 1.17
UBE2D3-215ENST00000503418 PPFIA4O75335 1185 aa22.39■■□□□ 1.17
UBE2D3-215ENST00000503418 ACTN1P12814 892 aa22.39■■□□□ 1.17
UBE2D3-215ENST00000503418 RABGGTBP53611 331 aa22.39■■□□□ 1.17
UBE2D3-215ENST00000503418 SGMS1Q86VZ5 419 aa22.39■■□□□ 1.17
UBE2D3-215ENST00000503418 INPP4AQ96PE3 977 aaPredicted RBP22.39■■□□□ 1.17
UBE2D3-215ENST00000503418 CTAGE1Q96RT6 745 aa22.39■■□□□ 1.17
UBE2D3-215ENST00000503418 MYO9BQ13459 2157 aa22.39■■□□□ 1.17
UBE2D3-215ENST00000503418 HAS3O00219 553 aa22.38■■□□□ 1.17
UBE2D3-215ENST00000503418 PIK3CDO00329 1044 aa22.38■■□□□ 1.17
UBE2D3-215ENST00000503418 DLL1O00548 723 aa22.38■■□□□ 1.17
UBE2D3-215ENST00000503418 HOXD8P13378 290 aaPredicted RBP22.38■■□□□ 1.17
UBE2D3-215ENST00000503418 ATP2A2P16615 1042 aaKnown RBP22.38■■□□□ 1.17
UBE2D3-215ENST00000503418 ADCK5Q3MIX3 580 aa22.38■■□□□ 1.17
UBE2D3-215ENST00000503418 APOA5Q6Q788 366 aa22.38■■□□□ 1.17
UBE2D3-215ENST00000503418 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.38■■□□□ 1.174e-11■□□□□ 10.1
UBE2D3-215ENST00000503418 RASEFQ8IZ41 740 aa22.38■■□□□ 1.17
UBE2D3-215ENST00000503418 TET1Q8NFU7 2136 aa22.38■■□□□ 1.17
UBE2D3-215ENST00000503418 AFAP1L1Q8TED9 768 aa22.38■■□□□ 1.17
UBE2D3-215ENST00000503418 DHX38Q92620 1227 aaKnown RBP22.38■■□□□ 1.17
UBE2D3-215ENST00000503418 BCAS3Q9H6U6 928 aa22.38■■□□□ 1.17
UBE2D3-215ENST00000503418 PSTPIP2Q9H939 334 aa22.38■■□□□ 1.17
UBE2D3-215ENST00000503418 YBX2Q9Y2T7 364 aaKnown RBP22.38■■□□□ 1.17
UBE2D3-215ENST00000503418 NOP56O00567 594 aaKnown RBP22.37■■□□□ 1.17
UBE2D3-215ENST00000503418 FIBPO43427 364 aa22.37■■□□□ 1.17
UBE2D3-215ENST00000503418 ICAM3P32942 547 aa22.37■■□□□ 1.17
UBE2D3-215ENST00000503418 NEDD9Q14511 834 aa22.37■■□□□ 1.17
UBE2D3-215ENST00000503418 PCNX4Q63HM2 1172 aa22.37■■□□□ 1.17
UBE2D3-215ENST00000503418 DHX32Q7L7V1 743 aaKnown RBP22.37■■□□□ 1.17
UBE2D3-215ENST00000503418 HEATR3Q7Z4Q2 680 aa22.37■■□□□ 1.17
UBE2D3-215ENST00000503418 SLC28A3Q9HAS3 691 aa22.37■■□□□ 1.17
UBE2D3-215ENST00000503418 SPATA31C2B4DYI2 1134 aa22.36■■□□□ 1.17
UBE2D3-215ENST00000503418 ZNF200P98182 395 aaPredicted RBP22.36■■□□□ 1.17
UBE2D3-215ENST00000503418 SEMA3FQ13275 785 aa22.36■■□□□ 1.17
UBE2D3-215ENST00000503418 KRT32Q14532 448 aa22.36■■□□□ 1.17
UBE2D3-215ENST00000503418 UBE2SQ16763 222 aa22.36■■□□□ 1.17
UBE2D3-215ENST00000503418 LRRC8DQ7L1W4 858 aa22.36■■□□□ 1.17
UBE2D3-215ENST00000503418 CYFIP1Q7L576 1253 aa22.36■■□□□ 1.17
UBE2D3-215ENST00000503418 GAS2L1Q99501 681 aaPredicted RBP22.36■■□□□ 1.17
UBE2D3-215ENST00000503418 PRDM12Q9H4Q4 367 aa22.36■■□□□ 1.17
UBE2D3-215ENST00000503418 RBM28Q9NW13 759 aaKnown RBP22.36■■□□□ 1.17
UBE2D3-215ENST00000503418 UNC80Q8N2C7 3258 aa22.35■■□□□ 1.17
UBE2D3-215ENST00000503418 ZBTB43O43298 467 aa22.35■■□□□ 1.17
UBE2D3-215ENST00000503418 LGALS2P05162 132 aa22.35■■□□□ 1.17
UBE2D3-215ENST00000503418 CKBP12277 381 aa22.35■■□□□ 1.17
UBE2D3-215ENST00000503418 MYOGP15173 224 aa22.35■■□□□ 1.17
UBE2D3-215ENST00000503418 SELPP16109 830 aa22.35■■□□□ 1.17
UBE2D3-215ENST00000503418 EXOSC10Q01780 885 aaKnown RBP22.35■■□□□ 1.17
UBE2D3-215ENST00000503418 PTK7Q13308 1070 aa22.35■■□□□ 1.17
UBE2D3-215ENST00000503418 RTN1Q16799 776 aa22.35■■□□□ 1.17
UBE2D3-215ENST00000503418 TSGA10IPQ3SY00 556 aa22.35■■□□□ 1.17
UBE2D3-215ENST00000503418 XRRA1Q6P2D8 792 aa22.35■■□□□ 1.17
UBE2D3-215ENST00000503418 METTL7BQ6UX53 244 aa22.35■■□□□ 1.17
UBE2D3-215ENST00000503418 C16orf70Q9BSU1 422 aa22.35■■□□□ 1.17
UBE2D3-215ENST00000503418 BRPF3Q9ULD4 1205 aa22.35■■□□□ 1.17
UBE2D3-215ENST00000503418 CNTNAP5Q8WYK1 1306 aa22.34■■□□□ 1.17
UBE2D3-215ENST00000503418 SP4Q02446 784 aa22.34■■□□□ 1.17
UBE2D3-215ENST00000503418 NLRX1Q86UT6 975 aa22.34■■□□□ 1.17
UBE2D3-215ENST00000503418 NAP1L2Q9ULW6 460 aaPredicted RBP22.34■■□□□ 1.17
UBE2D3-215ENST00000503418 PCDHA11Q9Y5I1 949 aa22.34■■□□□ 1.17
UBE2D3-215ENST00000503418 A0A0C4DFX4 3053 aa22.33■■□□□ 1.17
UBE2D3-215ENST00000503418 KLF18A0A0U1RQI7 1052 aa22.33■■□□□ 1.17
UBE2D3-215ENST00000503418 SPDYE3A6NKU9 549 aa22.33■■□□□ 1.17
UBE2D3-215ENST00000503418 GOLGA8AA7E2F4 631 aa22.33■■□□□ 1.17
UBE2D3-215ENST00000503418 GOLGA8BA8MQT2 603 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms