RNA–Protein interactions for RNA: ENST00000502604.5

CDK7-202, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-202ENST00000502604 PPTC7Q8NI37 304 aa13.69□□□□□ -0.22
CDK7-202ENST00000502604 CTCFLQ8NI51 663 aaPredicted RBP13.69□□□□□ -0.22
CDK7-202ENST00000502604 SPZ1Q9BXG8 430 aa13.69□□□□□ -0.22
CDK7-202ENST00000502604 LRRC2Q9BYS8 371 aa13.69□□□□□ -0.22
CDK7-202ENST00000502604 NOD1Q9Y239 953 aa13.69□□□□□ -0.22
CDK7-202ENST00000502604 YBX2Q9Y2T7 364 aaKnown RBP13.69□□□□□ -0.22
CDK7-202ENST00000502604 ZBBXA8MT70 800 aa13.68□□□□□ -0.22
CDK7-202ENST00000502604 RBAK-RBAKDNI3L0D1 243 aa13.68□□□□□ -0.22
CDK7-202ENST00000502604 PLEKHA8P1O95397 391 aa13.68□□□□□ -0.22
CDK7-202ENST00000502604 IQCF3P0C7M6 154 aa13.68□□□□□ -0.22
CDK7-202ENST00000502604 UBA1P22314 1058 aaKnown RBP13.68□□□□□ -0.22
CDK7-202ENST00000502604 CCND2P30279 289 aa13.68□□□□□ -0.22
CDK7-202ENST00000502604 RABGGTBP53611 331 aa13.68□□□□□ -0.22
CDK7-202ENST00000502604 SP2Q02086 613 aa13.68□□□□□ -0.22
CDK7-202ENST00000502604 TRAF1Q13077 416 aa13.68□□□□□ -0.22
CDK7-202ENST00000502604 LAMC2Q13753 1193 aa13.68□□□□□ -0.22
CDK7-202ENST00000502604 PTGISQ16647 500 aa13.68□□□□□ -0.22
CDK7-202ENST00000502604 HSDL1Q3SXM5 330 aa13.68□□□□□ -0.22
CDK7-202ENST00000502604 MYSM1Q5VVJ2 828 aa13.68□□□□□ -0.22
CDK7-202ENST00000502604 NFXL1Q6ZNB6 911 aa13.68□□□□□ -0.22
CDK7-202ENST00000502604 SESTD1Q86VW0 696 aa13.68□□□□□ -0.22
CDK7-202ENST00000502604 RAB11FIP4Q86YS3 637 aa13.68□□□□□ -0.22
CDK7-202ENST00000502604 DHX37Q8IY37 1157 aaKnown RBP13.68□□□□□ -0.22
CDK7-202ENST00000502604 CMTR1Q8N1G2 835 aaKnown RBP13.68□□□□□ -0.22
CDK7-202ENST00000502604 MAP3K14Q99558 947 aa13.68□□□□□ -0.22
CDK7-202ENST00000502604 FRMPD4Q14CM0 1322 aa13.68□□□□□ -0.22
CDK7-202ENST00000502604 GGPS1O95749 300 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 F2P00734 622 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 KIF5BP33176 963 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 PSEN2P49810 448 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 CELF3Q5SZQ8 465 aaKnown RBP13.67□□□□□ -0.22
CDK7-202ENST00000502604 SRBD1Q8N5C6 995 aaKnown RBP13.67□□□□□ -0.22
CDK7-202ENST00000502604 DHX38Q92620 1227 aaKnown RBP13.67□□□□□ -0.22
CDK7-202ENST00000502604 RRP36Q96EU6 259 aaKnown RBP13.67□□□□□ -0.22
CDK7-202ENST00000502604 TMEM87BQ96K49 555 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 SPATA33Q96N06 139 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 ALG1Q9BT22 464 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 MTA3Q9BTC8 594 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 NKX2-4Q9H2Z4 354 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 HDAC6Q9UBN7 1215 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 GTF2IRD1Q9UHL9 959 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 SLC4A7Q9Y6M7 1214 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 KAT6AQ92794 2004 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 CCDC69A6NI79 296 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 PFKMP08237 780 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 HOXD8P13378 290 aaPredicted RBP13.67□□□□□ -0.22
CDK7-202ENST00000502604 MYOGP15173 224 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 MRPS9P82933 396 aaKnown RBP13.67□□□□□ -0.22
CDK7-202ENST00000502604 BFSP2Q13515 415 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 MFSD10Q14728 455 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 RAB30Q15771 203 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 KIAA0753Q2KHM9 967 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 KCNV1Q6PIU1 500 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 USP17L6PQ6QN14 398 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 RETREG2Q8NC44 543 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 PRDM12Q9H4Q4 367 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 BCAS3Q9H6U6 928 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 MSRAQ9UJ68 235 aa13.67□□□□□ -0.22
CDK7-202ENST00000502604 hCG_1642624A0A1W2PR95 340 aa13.66□□□□□ -0.22
CDK7-202ENST00000502604 HAS3O00219 553 aa13.66□□□□□ -0.22
CDK7-202ENST00000502604 ATP2A2P16615 1042 aaKnown RBP13.66□□□□□ -0.22
CDK7-202ENST00000502604 RFC2P35250 354 aa13.66□□□□□ -0.22
CDK7-202ENST00000502604 LIFRP42702 1097 aa13.66□□□□□ -0.22
CDK7-202ENST00000502604 C7orf31Q8N865 590 aa13.66□□□□□ -0.22
CDK7-202ENST00000502604 USP38Q8NB14 1042 aa13.66□□□□□ -0.22
CDK7-202ENST00000502604 KATNAL1Q9BW62 490 aa13.66□□□□□ -0.22
CDK7-202ENST00000502604 SEC63Q9UGP8 760 aaKnown RBP13.66□□□□□ -0.22
CDK7-202ENST00000502604 MEIS2O14770 477 aa13.65□□□□□ -0.22
CDK7-202ENST00000502604 PRR29P0C7W0 189 aa13.65□□□□□ -0.22
CDK7-202ENST00000502604 TGFB3P10600 412 aa13.65□□□□□ -0.22
CDK7-202ENST00000502604 SMARCA1P28370 1054 aa13.65□□□□□ -0.22
CDK7-202ENST00000502604 ZNF200P98182 395 aaPredicted RBP13.65□□□□□ -0.22
CDK7-202ENST00000502604 SEMA3FQ13275 785 aa13.65□□□□□ -0.22
CDK7-202ENST00000502604 HIC1Q14526 733 aa13.65□□□□□ -0.22
CDK7-202ENST00000502604 GPNMBQ14956 572 aa13.65□□□□□ -0.22
CDK7-202ENST00000502604 MICU3Q86XE3 530 aa13.65□□□□□ -0.22
CDK7-202ENST00000502604 TMTC2Q8N394 836 aa13.65□□□□□ -0.22
CDK7-202ENST00000502604 CCDC82Q8N4S0 544 aa13.65□□□□□ -0.22
CDK7-202ENST00000502604 SMARCC2Q8TAQ2 1214 aa13.65□□□□□ -0.22
CDK7-202ENST00000502604 CAGE1Q8TC20 777 aa13.65□□□□□ -0.22
CDK7-202ENST00000502604 AFAP1L1Q8TED9 768 aa13.65□□□□□ -0.22
CDK7-202ENST00000502604 WNT8BQ93098 351 aa13.65□□□□□ -0.22
CDK7-202ENST00000502604 INPP4AQ96PE3 977 aaPredicted RBP13.65□□□□□ -0.22
CDK7-202ENST00000502604 LZTS2Q9BRK4 669 aa13.65□□□□□ -0.22
CDK7-202ENST00000502604 FTOQ9C0B1 505 aaKnown RBP eCLIP13.65□□□□□ -0.22
CDK7-202ENST00000502604 MLXIPQ9HAP2 919 aa13.65□□□□□ -0.22
CDK7-202ENST00000502604 RTEL1Q9NZ71 1219 aa13.65□□□□□ -0.22
CDK7-202ENST00000502604 SLC12A7Q9Y666 1083 aa13.65□□□□□ -0.22
CDK7-202ENST00000502604 TTC28Q96AY4 2481 aa13.65□□□□□ -0.22
CDK7-202ENST00000502604 MICAL3Q7RTP6 2002 aa13.64□□□□□ -0.23
CDK7-202ENST00000502604 PIK3CDO00329 1044 aa13.64□□□□□ -0.23
CDK7-202ENST00000502604 PPFIA4O75335 1185 aa13.64□□□□□ -0.23
CDK7-202ENST00000502604 ACTN1P12814 892 aa13.64□□□□□ -0.23
CDK7-202ENST00000502604 GNAQP50148 359 aa13.64□□□□□ -0.23
CDK7-202ENST00000502604 PPP2R2DQ66LE6 453 aa13.64□□□□□ -0.23
CDK7-202ENST00000502604 TMTC3Q6ZXV5 915 aa13.64□□□□□ -0.23
CDK7-202ENST00000502604 LRRC8DQ7L1W4 858 aa13.64□□□□□ -0.23
CDK7-202ENST00000502604 SGMS1Q86VZ5 419 aa13.64□□□□□ -0.23
CDK7-202ENST00000502604 CCDC155Q8N6L0 562 aa13.64□□□□□ -0.23
CDK7-202ENST00000502604 TCEANC2Q96MN5 208 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms