RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 LRRC31Q6UY01 552 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 AMIGO3Q86WK7 504 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 CCDC42Q96M95 316 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 TSG101Q99816 390 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 IFIH1Q9BYX4 1025 aaKnown RBP8□□□□□ -1.13
LYSMD3-203ENST00000500869 GANQ9H2C0 597 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 ZSWIM4Q9H7M6 989 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 PLCB1Q9NQ66 1216 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 FEZ2Q9UHY8 353 aaPredicted RBP8□□□□□ -1.13
LYSMD3-203ENST00000500869 SLX4Q8IY92 1834 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 GOLGA8KD6RF30 607 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 TBX3O15119 743 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 NKRFO15226 690 aaKnown RBP eCLIP8□□□□□ -1.13
LYSMD3-203ENST00000500869 ZEB2O60315 1214 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 BBOX1O75936 387 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 SERPING1P05155 500 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 IDEP14735 1019 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 TECP42680 631 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 EPHB4P54760 987 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 COASYQ13057 564 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 NFIXQ14938 502 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 GPATCH4Q5T3I0 446 aaKnown RBP8□□□□□ -1.13
LYSMD3-203ENST00000500869 MAPKAPK5Q8IW41 473 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 AFAP1L1Q8TED9 768 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 MKL1Q969V6 931 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 ALS2CR12Q96Q35 445 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 SYNPO2Q9UMS6 1093 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 COL4A3BPQ9Y5P4 624 aa8□□□□□ -1.13
LYSMD3-203ENST00000500869 USP17L5A8MUK1 530 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 GNPATO15228 680 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 EIF4A3P38919 411 aaKnown RBP7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 MCCD1P59942 119 aaPredicted RBP7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 FKBP1AP62942 108 aaKnown RBP7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 MCM6Q14566 821 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 NAB2Q15742 525 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 HSP90B2PQ58FF3 399 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 KLHDC7AQ5VTJ3 777 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 PRR5LQ6MZQ0 368 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 EPM2AIP1Q7L775 607 aaPredicted RBP7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 SPATA4Q8NEY3 305 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 MRIQ9BWK5 157 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 TLR10Q9BXR5 811 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 JMJD4Q9H9V9 463 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 LRRC53A6NM62 1247 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 PPP1R11O60927 126 aaPredicted RBP7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 MYBL2P10244 700 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 USP11P51784 963 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 FKBP3Q00688 224 aaKnown RBP7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 USP17L2Q6R6M4 530 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 MYOCDQ8IZQ8 938 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 TRAF3IP3Q9Y228 551 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 ENC1O14682 589 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 TLR2O60603 784 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 PPFIA4O75335 1185 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 PRKCIP41743 596 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 CCDC70Q6NSX1 233 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 LEKR1Q6ZMV7 388 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 TMEM174Q8WUU8 243 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 DDX12PQ92771 950 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 FAM204AQ9H8W3 233 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 GGA1Q9UJY5 639 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 ATP6V0A2Q9Y487 856 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 DAGLAQ9Y4D2 1042 aa7.99□□□□□ -1.13
LYSMD3-203ENST00000500869 TTLL1O95922 423 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 LMAN1P49257 510 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 AP3B2Q13367 1082 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 ECM1Q16610 540 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 Q4G0T1 1027 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 KRT79Q5XKE5 535 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 KCNK18Q7Z418 384 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 CNBD1Q8NA66 436 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 RASSF8Q8NHQ8 419 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 RBM17Q96I25 401 aaKnown RBP7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 MXD3Q9BW11 206 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 TMEM260Q9NX78 707 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 STX8Q9UNK0 236 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 SRGAP2O75044 1071 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 GFPT2O94808 682 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 TDP2O95551 362 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 PLEKP08567 350 aaPredicted RBP7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 GOLGA8HP0CJ92 632 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 SPIRE1Q08AE8 756 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 MEI1Q5TIA1 1274 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 CUL5Q93034 780 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 INPP4AQ96PE3 977 aaPredicted RBP7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 SLC39A2Q9NP94 309 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 TMEM51Q9NW97 253 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 STIM2Q9P246 746 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 CCNL1Q9UK58 526 aaPredicted RBP7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 DUSP10Q9Y6W6 482 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 A0A0A6YYK5 440 aaPredicted RBP7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 ZBTB5O15062 677 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 SLC16A3O15427 465 aaKnown RBP7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 ONECUT3O60422 494 aaPredicted RBP7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 SLC12A3P55017 1021 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 SLC18A3Q16572 532 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 BICDL1Q6ZP65 573 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 TBC1D16Q8TBP0 767 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 SNX29Q8TEQ0 813 aa7.98□□□□□ -1.13
LYSMD3-203ENST00000500869 DCAF4Q8WV16 495 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms