RNA–Protein interactions for RNA: ENST00000498447.5

SMIM19-206, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-206ENST00000498447 SPRED2Q7Z698 418 aa20.4■□□□□ 0.86
SMIM19-206ENST00000498447 PCDHA1Q9Y5I3 950 aa20.4■□□□□ 0.86
SMIM19-206ENST00000498447 TCF20Q9UGU0 1960 aaKnown RBP20.39■□□□□ 0.86
SMIM19-206ENST00000498447 PALM3A6NDB9 673 aaPredicted RBP20.39■□□□□ 0.85
SMIM19-206ENST00000498447 HOXD8P13378 290 aaPredicted RBP20.39■□□□□ 0.85
SMIM19-206ENST00000498447 BMP1P13497 986 aa20.39■□□□□ 0.85
SMIM19-206ENST00000498447 HOXA13P31271 388 aaPredicted RBP20.39■□□□□ 0.85
SMIM19-206ENST00000498447 DEFB103AP81534 67 aa20.39■□□□□ 0.85
SMIM19-206ENST00000498447 PTK7Q13308 1070 aa20.39■□□□□ 0.85
SMIM19-206ENST00000498447 PGM5Q15124 567 aa20.39■□□□□ 0.85
SMIM19-206ENST00000498447 AAK1Q2M2I8 961 aa20.39■□□□□ 0.85
SMIM19-206ENST00000498447 MYSM1Q5VVJ2 828 aa20.39■□□□□ 0.85
SMIM19-206ENST00000498447 TMCO2Q7Z6W1 182 aaPredicted RBP20.39■□□□□ 0.85
SMIM19-206ENST00000498447 HOMER1Q86YM7 354 aa20.39■□□□□ 0.85
SMIM19-206ENST00000498447 SAMD3Q8N6K7 520 aa20.39■□□□□ 0.85
SMIM19-206ENST00000498447 YTHDC1Q96MU7 727 aaKnown RBP20.39■□□□□ 0.85
SMIM19-206ENST00000498447 COL4A4P53420 1690 aaPredicted RBP20.38■□□□□ 0.85
SMIM19-206ENST00000498447 LCHNA4D1U4 455 aa20.38■□□□□ 0.85
SMIM19-206ENST00000498447 TRDNQ13061 729 aa20.38■□□□□ 0.85
SMIM19-206ENST00000498447 GRB10Q13322 594 aa20.38■□□□□ 0.85
SMIM19-206ENST00000498447 SLC35G1Q2M3R5 365 aa20.38■□□□□ 0.85
SMIM19-206ENST00000498447 TCTN1Q2MV58 587 aa20.38■□□□□ 0.85
SMIM19-206ENST00000498447 TRIM71Q2Q1W2 868 aaKnown RBP20.38■□□□□ 0.85
SMIM19-206ENST00000498447 HSDL1Q3SXM5 330 aa20.38■□□□□ 0.85
SMIM19-206ENST00000498447 KCNV1Q6PIU1 500 aa20.38■□□□□ 0.85
SMIM19-206ENST00000498447 VSIG10LQ86VR7 867 aa20.38■□□□□ 0.85
SMIM19-206ENST00000498447 IL31RAQ8NI17 732 aa20.38■□□□□ 0.85
SMIM19-206ENST00000498447 WNT8BQ93098 351 aa20.38■□□□□ 0.85
SMIM19-206ENST00000498447 NECAB3Q96P71 396 aaPredicted RBP20.38■□□□□ 0.85
SMIM19-206ENST00000498447 BAZ2BQ9UIF8 2168 aaKnown RBP20.38■□□□□ 0.85
SMIM19-206ENST00000498447 SORBS3O60504 671 aa20.37■□□□□ 0.85
SMIM19-206ENST00000498447 PPFIA4O75335 1185 aa20.37■□□□□ 0.85
SMIM19-206ENST00000498447 GGPS1O95749 300 aa20.37■□□□□ 0.85
SMIM19-206ENST00000498447 GSPT1P15170 499 aaKnown RBP20.37■□□□□ 0.85
SMIM19-206ENST00000498447 UBA1P22314 1058 aaKnown RBP20.37■□□□□ 0.85
SMIM19-206ENST00000498447 KCNQ1P51787 676 aa20.37■□□□□ 0.85
SMIM19-206ENST00000498447 ZNF200P98182 395 aaPredicted RBP20.37■□□□□ 0.85
SMIM19-206ENST00000498447 GRM4Q14833 912 aa20.37■□□□□ 0.85
SMIM19-206ENST00000498447 CELF3Q5SZQ8 465 aaKnown RBP20.37■□□□□ 0.85
SMIM19-206ENST00000498447 TRAF7Q6Q0C0 670 aa20.37■□□□□ 0.85
SMIM19-206ENST00000498447 SPATA33Q96N06 139 aa20.37■□□□□ 0.85
SMIM19-206ENST00000498447 PIGSQ96S52 555 aa20.37■□□□□ 0.85
SMIM19-206ENST00000498447 ZBED2Q9BTP6 218 aa20.37■□□□□ 0.85
SMIM19-206ENST00000498447 RIOX1Q9H6W3 641 aa20.37■□□□□ 0.85
SMIM19-206ENST00000498447 ABHD14A-ACY1A0A1B0GW23 586 aa20.36■□□□□ 0.85
SMIM19-206ENST00000498447 LPXNO60711 386 aa20.36■□□□□ 0.85
SMIM19-206ENST00000498447 COL9A1P20849 921 aa20.36■□□□□ 0.85
SMIM19-206ENST00000498447 PDE4AP27815 886 aa20.36■□□□□ 0.85
SMIM19-206ENST00000498447 CCND2P30279 289 aa20.36■□□□□ 0.85
SMIM19-206ENST00000498447 TRAF1Q13077 416 aa20.36■□□□□ 0.85
SMIM19-206ENST00000498447 HIC1Q14526 733 aa20.36■□□□□ 0.85
SMIM19-206ENST00000498447 ZNF618Q5T7W0 954 aa20.36■□□□□ 0.85
SMIM19-206ENST00000498447 COG5Q9UP83 839 aa20.36■□□□□ 0.85
SMIM19-206ENST00000498447 BRWD1Q9NSI6 2320 aa20.35■□□□□ 0.85
SMIM19-206ENST00000498447 GCOM1H8Y6P7 765 aaPredicted RBP20.35■□□□□ 0.85
SMIM19-206ENST00000498447 RBAK-RBAKDNI3L0D1 243 aa20.35■□□□□ 0.85
SMIM19-206ENST00000498447 IFIT3O14879 490 aaKnown RBP20.35■□□□□ 0.85
SMIM19-206ENST00000498447 EFCAB14O75071 495 aa20.35■□□□□ 0.85
SMIM19-206ENST00000498447 GJB5O95377 273 aa20.35■□□□□ 0.85
SMIM19-206ENST00000498447 CYP21A2P08686 494 aa20.35■□□□□ 0.85
SMIM19-206ENST00000498447 POLR2MP0CAP2 368 aa20.35■□□□□ 0.85
SMIM19-206ENST00000498447 TGFB3P10600 412 aa20.35■□□□□ 0.85
SMIM19-206ENST00000498447 SP2Q02086 613 aa20.35■□□□□ 0.85
SMIM19-206ENST00000498447 MBTPS1Q14703 1052 aa20.35■□□□□ 0.85
SMIM19-206ENST00000498447 TTC22Q5TAA0 569 aa20.35■□□□□ 0.85
SMIM19-206ENST00000498447 FCHSD1Q86WN1 690 aa20.35■□□□□ 0.85
SMIM19-206ENST00000498447 GPKOWQ92917 476 aaPredicted RBP eCLIP20.35■□□□□ 0.85
SMIM19-206ENST00000498447 ZFP91Q96JP5 570 aaPredicted RBP20.35■□□□□ 0.85
SMIM19-206ENST00000498447 SENP2Q9HC62 589 aa20.35■□□□□ 0.85
SMIM19-206ENST00000498447 U3KPZ7 1027 aaPredicted RBP20.35■□□□□ 0.85
SMIM19-206ENST00000498447 ERICH2A1L162 156 aa20.34■□□□□ 0.85
SMIM19-206ENST00000498447 CYTH3O43739 400 aa20.34■□□□□ 0.85
SMIM19-206ENST00000498447 PTH1RQ03431 593 aa20.34■□□□□ 0.85
SMIM19-206ENST00000498447 IKBKEQ14164 716 aa20.34■□□□□ 0.85
SMIM19-206ENST00000498447 GDPD5Q8WTR4 605 aa20.34■□□□□ 0.85
SMIM19-206ENST00000498447 RAD9AQ99638 391 aa20.34■□□□□ 0.85
SMIM19-206ENST00000498447 C16orf70Q9BSU1 422 aa20.34■□□□□ 0.85
SMIM19-206ENST00000498447 MLXIPQ9HAP2 919 aa20.34■□□□□ 0.85
SMIM19-206ENST00000498447 PNMA6FA0A0J9YX94 578 aa20.33■□□□□ 0.85
SMIM19-206ENST00000498447 LGR5O75473 907 aa20.33■□□□□ 0.85
SMIM19-206ENST00000498447 TROAPQ12815 778 aa20.33■□□□□ 0.85
SMIM19-206ENST00000498447 RALYLQ86SE5 291 aaKnown RBP20.33■□□□□ 0.85
SMIM19-206ENST00000498447 SERINC5Q86VE9 423 aa20.33■□□□□ 0.85
SMIM19-206ENST00000498447 RUFY2Q8WXA3 655 aa20.33■□□□□ 0.85
SMIM19-206ENST00000498447 TAF6LQ9Y6J9 622 aa20.33■□□□□ 0.85
SMIM19-206ENST00000498447 EMSYQ7Z589 1322 aa20.32■□□□□ 0.84
SMIM19-206ENST00000498447 WTAPQ15007 396 aa20.32■□□□□ 0.84
SMIM19-206ENST00000498447 SART3Q15020 963 aaKnown RBP20.32■□□□□ 0.84
SMIM19-206ENST00000498447 FAM117BQ6P1L5 589 aa20.32■□□□□ 0.84
SMIM19-206ENST00000498447 HLA-CQ95604 372 aa20.32■□□□□ 0.84
SMIM19-206ENST00000498447 RNF39Q9H2S5 420 aa20.32■□□□□ 0.84
SMIM19-206ENST00000498447 MTUS1Q9ULD2 1270 aa20.32■□□□□ 0.84
SMIM19-206ENST00000498447 FRMPD4Q14CM0 1322 aa20.31■□□□□ 0.84
SMIM19-206ENST00000498447 C17orf102A2RUQ5 167 aa20.31■□□□□ 0.84
SMIM19-206ENST00000498447 LINC01553A4QN01 128 aa20.31■□□□□ 0.84
SMIM19-206ENST00000498447 RSPH10B2B2RC85 870 aa20.31■□□□□ 0.84
SMIM19-206ENST00000498447 E7EWF7 191 aa20.31■□□□□ 0.84
SMIM19-206ENST00000498447 H3BRB1 525 aa20.31■□□□□ 0.84
SMIM19-206ENST00000498447 LGALS2P05162 132 aa20.31■□□□□ 0.84
SMIM19-206ENST00000498447 RSPH10BP0C881 870 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms