RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 ADCK5Q3MIX3 580 aa17.41■□□□□ 0.38
NEK4-206ENST00000496822 TMTC3Q6ZXV5 915 aa17.41■□□□□ 0.38
NEK4-206ENST00000496822 SGMS1Q86VZ5 419 aa17.41■□□□□ 0.38
NEK4-206ENST00000496822 INPP4AQ96PE3 977 aaPredicted RBP17.41■□□□□ 0.38
NEK4-206ENST00000496822 MTIF3Q9H2K0 278 aaKnown RBP17.41■□□□□ 0.38
NEK4-206ENST00000496822 ZNF576Q9H609 170 aa17.41■□□□□ 0.38
NEK4-206ENST00000496822 HDAC6Q9UBN7 1215 aa17.41■□□□□ 0.38
NEK4-206ENST00000496822 GTF2IRD1Q9UHL9 959 aa17.41■□□□□ 0.38
NEK4-206ENST00000496822 SCN5AQ14524 2016 aa17.41■□□□□ 0.38
NEK4-206ENST00000496822 ZBBXA8MT70 800 aa17.4■□□□□ 0.38
NEK4-206ENST00000496822 IQCF3P0C7M6 154 aa17.4■□□□□ 0.38
NEK4-206ENST00000496822 CALM1P0DP23 149 aa17.4■□□□□ 0.38
NEK4-206ENST00000496822 CALM2P0DP24 149 aa17.4■□□□□ 0.38
NEK4-206ENST00000496822 CALM3P0DP25 149 aa17.4■□□□□ 0.38
NEK4-206ENST00000496822 FOSL2P15408 326 aa17.4■□□□□ 0.38
NEK4-206ENST00000496822 MFSD10Q14728 455 aa17.4■□□□□ 0.38
NEK4-206ENST00000496822 KIAA0753Q2KHM9 967 aa17.4■□□□□ 0.38
NEK4-206ENST00000496822 RNF20Q5VTR2 975 aa17.4■□□□□ 0.38
NEK4-206ENST00000496822 KCNV1Q6PIU1 500 aa17.4■□□□□ 0.38
NEK4-206ENST00000496822 RPUSD2Q8IZ73 545 aaKnown RBP17.4■□□□□ 0.38
NEK4-206ENST00000496822 CCDC82Q8N4S0 544 aa17.4■□□□□ 0.38
NEK4-206ENST00000496822 FANCBQ8NB91 859 aa17.4■□□□□ 0.38
NEK4-206ENST00000496822 MAFAQ8NHW3 353 aaPredicted RBP17.4■□□□□ 0.38
NEK4-206ENST00000496822 SMARCC2Q8TAQ2 1214 aa17.4■□□□□ 0.38
NEK4-206ENST00000496822 NEK1Q96PY6 1258 aa17.4■□□□□ 0.38
NEK4-206ENST00000496822 RTEL1Q9NZ71 1219 aa17.4■□□□□ 0.38
NEK4-206ENST00000496822 YBX2Q9Y2T7 364 aaKnown RBP17.4■□□□□ 0.38
NEK4-206ENST00000496822 CHD9Q3L8U1 2897 aa17.39■□□□□ 0.37
NEK4-206ENST00000496822 PIK3CDO00329 1044 aa17.39■□□□□ 0.37
NEK4-206ENST00000496822 PFKMP08237 780 aa17.39■□□□□ 0.37
NEK4-206ENST00000496822 TGFB3P10600 412 aa17.39■□□□□ 0.37
NEK4-206ENST00000496822 RABGGTBP53611 331 aa17.39■□□□□ 0.37
NEK4-206ENST00000496822 EXOSC10Q01780 885 aaKnown RBP17.39■□□□□ 0.37
NEK4-206ENST00000496822 HIC1Q14526 733 aa17.39■□□□□ 0.37
NEK4-206ENST00000496822 APOA5Q6Q788 366 aa17.39■□□□□ 0.37
NEK4-206ENST00000496822 C7orf31Q8N865 590 aa17.39■□□□□ 0.37
NEK4-206ENST00000496822 RETREG2Q8NC44 543 aa17.39■□□□□ 0.37
NEK4-206ENST00000496822 WNT8BQ93098 351 aa17.39■□□□□ 0.37
NEK4-206ENST00000496822 KATNAL1Q9BW62 490 aa17.39■□□□□ 0.37
NEK4-206ENST00000496822 NKX2-4Q9H2Z4 354 aa17.39■□□□□ 0.37
NEK4-206ENST00000496822 BRPF3Q9ULD4 1205 aa17.39■□□□□ 0.37
NEK4-206ENST00000496822 TELO2Q9Y4R8 837 aa17.39■□□□□ 0.37
NEK4-206ENST00000496822 UNC80Q8N2C7 3258 aa17.39■□□□□ 0.37
NEK4-206ENST00000496822 ICAM3P32942 547 aa17.38■□□□□ 0.37
NEK4-206ENST00000496822 ZNF200P98182 395 aaPredicted RBP17.38■□□□□ 0.37
NEK4-206ENST00000496822 BFSP2Q13515 415 aa17.38■□□□□ 0.37
NEK4-206ENST00000496822 UBE2SQ16763 222 aa17.38■□□□□ 0.37
NEK4-206ENST00000496822 CUL5Q93034 780 aa17.38■□□□□ 0.37
NEK4-206ENST00000496822 CCDC136Q96JN2 1154 aa17.38■□□□□ 0.37
NEK4-206ENST00000496822 C16orf70Q9BSU1 422 aa17.38■□□□□ 0.37
NEK4-206ENST00000496822 MLXIPQ9HAP2 919 aa17.38■□□□□ 0.37
NEK4-206ENST00000496822 SLC4A7Q9Y6M7 1214 aa17.38■□□□□ 0.37
NEK4-206ENST00000496822 CNTNAP5Q8WYK1 1306 aa17.38■□□□□ 0.37
NEK4-206ENST00000496822 GBF1Q92538 1859 aa17.37■□□□□ 0.37
NEK4-206ENST00000496822 SPATA31C2B4DYI2 1134 aa17.37■□□□□ 0.37
NEK4-206ENST00000496822 PPFIA4O75335 1185 aa17.37■□□□□ 0.37
NEK4-206ENST00000496822 MYOGP15173 224 aa17.37■□□□□ 0.37
NEK4-206ENST00000496822 RFC2P35250 354 aa17.37■□□□□ 0.37
NEK4-206ENST00000496822 GPNMBQ14956 572 aa17.37■□□□□ 0.37
NEK4-206ENST00000496822 RAB30Q15771 203 aa17.37■□□□□ 0.37
NEK4-206ENST00000496822 TSGA10IPQ3SY00 556 aa17.37■□□□□ 0.37
NEK4-206ENST00000496822 GNPTABQ3T906 1256 aa17.37■□□□□ 0.37
NEK4-206ENST00000496822 PCNX4Q63HM2 1172 aa17.37■□□□□ 0.37
NEK4-206ENST00000496822 DHX32Q7L7V1 743 aaKnown RBP17.37■□□□□ 0.37
NEK4-206ENST00000496822 CAGE1Q8TC20 777 aa17.37■□□□□ 0.37
NEK4-206ENST00000496822 MYH7BA7E2Y1 1941 aa17.37■□□□□ 0.37
NEK4-206ENST00000496822 FIBPO43427 364 aa17.36■□□□□ 0.37
NEK4-206ENST00000496822 STAM2O75886 525 aa17.36■□□□□ 0.37
NEK4-206ENST00000496822 LGALS2P05162 132 aa17.36■□□□□ 0.37
NEK4-206ENST00000496822 CPA1P15085 419 aa17.36■□□□□ 0.37
NEK4-206ENST00000496822 ATP2A2P16615 1042 aaKnown RBP17.36■□□□□ 0.37
NEK4-206ENST00000496822 RBL2Q08999 1139 aa17.36■□□□□ 0.37
NEK4-206ENST00000496822 FUT2Q10981 343 aa17.36■□□□□ 0.37
NEK4-206ENST00000496822 TRIM71Q2Q1W2 868 aaKnown RBP17.36■□□□□ 0.37
NEK4-206ENST00000496822 WWC2Q6AWC2 1192 aa17.36■□□□□ 0.37
NEK4-206ENST00000496822 TYW1BQ6NUM6 668 aa17.36■□□□□ 0.37
NEK4-206ENST00000496822 LRRC8DQ7L1W4 858 aa17.36■□□□□ 0.37
NEK4-206ENST00000496822 CYFIP1Q7L576 1253 aa17.36■□□□□ 0.37
NEK4-206ENST00000496822 HEATR3Q7Z4Q2 680 aa17.36■□□□□ 0.37
NEK4-206ENST00000496822 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.36■□□□□ 0.37
NEK4-206ENST00000496822 CCDC155Q8N6L0 562 aa17.36■□□□□ 0.37
NEK4-206ENST00000496822 AFAP1L1Q8TED9 768 aa17.36■□□□□ 0.37
NEK4-206ENST00000496822 FTOQ9C0B1 505 aaKnown RBP eCLIP17.36■□□□□ 0.37
NEK4-206ENST00000496822 PRDM12Q9H4Q4 367 aa17.36■□□□□ 0.37
NEK4-206ENST00000496822 PSTPIP2Q9H939 334 aa17.36■□□□□ 0.37
NEK4-206ENST00000496822 MSRAQ9UJ68 235 aa17.36■□□□□ 0.37
NEK4-206ENST00000496822 A0A0C4DFX4 3053 aa17.36■□□□□ 0.37
NEK4-206ENST00000496822 CKBP12277 381 aa17.35■□□□□ 0.37
NEK4-206ENST00000496822 SELPP16109 830 aa17.35■□□□□ 0.37
NEK4-206ENST00000496822 TCTN1Q2MV58 587 aa17.35■□□□□ 0.37
NEK4-206ENST00000496822 TRAF7Q6Q0C0 670 aa17.35■□□□□ 0.37
NEK4-206ENST00000496822 METTL7BQ6UX53 244 aa17.35■□□□□ 0.37
NEK4-206ENST00000496822 SYNE3Q6ZMZ3 975 aa17.35■□□□□ 0.37
NEK4-206ENST00000496822 TRIM50Q86XT4 487 aa17.35■□□□□ 0.37
NEK4-206ENST00000496822 USP38Q8NB14 1042 aa17.35■□□□□ 0.37
NEK4-206ENST00000496822 KLF18A0A0U1RQI7 1052 aa17.34■□□□□ 0.37
NEK4-206ENST00000496822 DLL1O00548 723 aa17.34■□□□□ 0.37
NEK4-206ENST00000496822 NOP56O00567 594 aaKnown RBP17.34■□□□□ 0.37
NEK4-206ENST00000496822 ZBTB43O43298 467 aa17.34■□□□□ 0.37
NEK4-206ENST00000496822 NBNO60934 754 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms