RNA–Protein interactions for RNA: ENST00000496206.5

NEPRO-223, Transcript of nucleolus and neural progenitor protein, human

TSL 5

Gene NEPRO, Length 751 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-223	ENST00000496206	GGPS1	O95749	300 aa		10.14	□□□□□ -0.79
NEPRO-223	ENST00000496206	ZNF286B	P0CG31	522 aa		10.14	□□□□□ -0.79
NEPRO-223	ENST00000496206	RFC2	P35250	354 aa		10.14	□□□□□ -0.79
NEPRO-223	ENST00000496206	BMP2KL	Q5H9B9	411 aa		10.14	□□□□□ -0.79
NEPRO-223	ENST00000496206	CREB3L3	Q68CJ9	461 aa		10.14	□□□□□ -0.79
NEPRO-223	ENST00000496206	GDF6	Q6KF10	455 aa	Predicted RBP	10.14	□□□□□ -0.79
NEPRO-223	ENST00000496206	TMTC2	Q8N394	836 aa		10.14	□□□□□ -0.79
NEPRO-223	ENST00000496206	CCDC155	Q8N6L0	562 aa		10.14	□□□□□ -0.79
NEPRO-223	ENST00000496206	KAT2B	Q92831	832 aa		10.14	□□□□□ -0.79
NEPRO-223	ENST00000496206	VWCE	Q96DN2	955 aa		10.14	□□□□□ -0.79
NEPRO-223	ENST00000496206	RRP36	Q96EU6	259 aa	Known RBP	10.14	□□□□□ -0.79
NEPRO-223	ENST00000496206	TMEM87B	Q96K49	555 aa		10.14	□□□□□ -0.79
NEPRO-223	ENST00000496206	LZTS2	Q9BRK4	669 aa		10.14	□□□□□ -0.79
NEPRO-223	ENST00000496206	KATNAL1	Q9BW62	490 aa		10.14	□□□□□ -0.79
NEPRO-223	ENST00000496206	SEC63	Q9UGP8	760 aa	Known RBP	10.14	□□□□□ -0.79
NEPRO-223	ENST00000496206	FRMPD4	Q14CM0	1322 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	MUC3A	Q02505	3323 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	PLEKHA8P1	O95397	391 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	F2	P00734	622 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	IQCF3	P0C7M6	154 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	TGFB3	P10600	412 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	ACTN1	P12814	892 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	ATP2A2	P16615	1042 aa	Known RBP	10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	UBA1	P22314	1058 aa	Known RBP	10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	PSEN2	P49810	448 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	GNAQ	P50148	359 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	MFSD10	Q14728	455 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	NECTIN1	Q15223	517 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	KIAA0753	Q2KHM9	967 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	GNPTAB	Q3T906	1256 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	CELF3	Q5SZQ8	465 aa	Known RBP	10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	MYSM1	Q5VVJ2	828 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	SESTD1	Q86VW0	696 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	SKAP1	Q86WV1	359 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	C7orf31	Q8N865	590 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	CAGE1	Q8TC20	777 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	AFAP1L1	Q8TED9	768 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	ZFP91	Q96JP5	570 aa	Predicted RBP	10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	SPATA33	Q96N06	139 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	GAS2L1	Q99501	681 aa	Predicted RBP	10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	ALG1	Q9BT22	464 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	NKX2-4	Q9H2Z4	354 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	SLC28A3	Q9HAS3	691 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	GTF2IRD1	Q9UHL9	959 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	BDP1	A6H8Y1	2624 aa		10.13	□□□□□ -0.79
NEPRO-223	ENST00000496206	NCOR1	O75376	2440 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	PPFIA4	O75335	1185 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	STAM2	O75886	525 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	CALM1	P0DP23	149 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	CALM2	P0DP24	149 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	CALM3	P0DP25	149 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	HOXD8	P13378	290 aa	Predicted RBP	10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	RXRA	P19793	462 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	SMARCA1	P28370	1054 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	LIFR	P42702	1097 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	RABGGTB	P53611	331 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	MRPS9	P82933	396 aa	Known RBP	10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	SP2	Q02086	613 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	COL9A3	Q14050	684 aa	Predicted RBP	10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	HSDL1	Q3SXM5	330 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	RNF20	Q5VTR2	975 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	RAB11FIP4	Q86YS3	637 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	SRBD1	Q8N5C6	995 aa	Known RBP	10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	SMARCC2	Q8TAQ2	1214 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	CUL5	Q93034	780 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	CTAGE1	Q96RT6	745 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	LRRC2	Q9BYS8	371 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	PRDM12	Q9H4Q4	367 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	MLXIP	Q9HAP2	919 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	HDAC6	Q9UBN7	1215 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	YBX2	Q9Y2T7	364 aa	Known RBP	10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	PCDHA11	Q9Y5I1	949 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	SLC12A7	Q9Y666	1083 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	MICAL3	Q7RTP6	2002 aa		10.12	□□□□□ -0.79
NEPRO-223	ENST00000496206	HAS3	O00219	553 aa		10.11	□□□□□ -0.79
NEPRO-223	ENST00000496206	PIK3CD	O00329	1044 aa		10.11	□□□□□ -0.79
NEPRO-223	ENST00000496206	NOP56	O00567	594 aa	Known RBP	10.11	□□□□□ -0.79
NEPRO-223	ENST00000496206	SELP	P16109	830 aa		10.11	□□□□□ -0.79
NEPRO-223	ENST00000496206	PPP2R2D	Q66LE6	453 aa		10.11	□□□□□ -0.79
NEPRO-223	ENST00000496206	USP17L6P	Q6QN14	398 aa		10.11	□□□□□ -0.79
NEPRO-223	ENST00000496206	LRRC8D	Q7L1W4	858 aa		10.11	□□□□□ -0.79
NEPRO-223	ENST00000496206	MICU3	Q86XE3	530 aa		10.11	□□□□□ -0.79
NEPRO-223	ENST00000496206	CMTR1	Q8N1G2	835 aa	Known RBP	10.11	□□□□□ -0.79
NEPRO-223	ENST00000496206	DHX38	Q92620	1227 aa	Known RBP	10.11	□□□□□ -0.79
NEPRO-223	ENST00000496206	INPP4A	Q96PE3	977 aa	Predicted RBP	10.11	□□□□□ -0.79
NEPRO-223	ENST00000496206	SLC9A7	Q96T83	725 aa		10.11	□□□□□ -0.79
NEPRO-223	ENST00000496206	PRRC2B	Q5JSZ5	2229 aa	Known RBP	10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	hCG_1642624	A0A1W2PR95	340 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	MEIS2	O14770	477 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	FIBP	O43427	364 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	CDC45	O75419	566 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	BAIAP3	O94812	1187 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	CKB	P12277	381 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	MYOG	P15173	224 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	ICAM3	P32942	547 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	KCNJ6	P48051	423 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	RBL2	Q08999	1139 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	PTK7	Q13308	1070 aa		10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms