RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 VTA1Q9NP79 307 aa10.75□□□□□ -0.69
ACTN4-207ENST00000495553 PXMP2Q9NR77 195 aa10.75□□□□□ -0.69
ACTN4-207ENST00000495553 COL20A1Q9P218 1284 aa10.75□□□□□ -0.69
ACTN4-207ENST00000495553 TFIP11Q9UBB9 837 aaKnown RBP10.75□□□□□ -0.69
ACTN4-207ENST00000495553 DDX25Q9UHL0 483 aaKnown RBP10.75□□□□□ -0.69
ACTN4-207ENST00000495553 ASTN1O14525 1302 aa10.75□□□□□ -0.69
ACTN4-207ENST00000495553 DOCK3Q8IZD9 2030 aa10.75□□□□□ -0.69
ACTN4-207ENST00000495553 ZNF236Q9UL36 1845 aa10.74□□□□□ -0.69
ACTN4-207ENST00000495553 MKI67P46013 3256 aaKnown RBP10.74□□□□□ -0.69
ACTN4-207ENST00000495553 SPTLC2O15270 562 aa10.74□□□□□ -0.69
ACTN4-207ENST00000495553 MYCNP04198 464 aaPredicted RBP10.74□□□□□ -0.69
ACTN4-207ENST00000495553 MYCLP12524 364 aaPredicted RBP10.74□□□□□ -0.69
ACTN4-207ENST00000495553 ME1P48163 572 aa10.74□□□□□ -0.69
ACTN4-207ENST00000495553 NASPP49321 788 aaPredicted RBP10.74□□□□□ -0.69
ACTN4-207ENST00000495553 ZNF174Q15697 407 aa10.74□□□□□ -0.69
ACTN4-207ENST00000495553 STXBP2Q15833 593 aa10.74□□□□□ -0.69
ACTN4-207ENST00000495553 CALCRLQ16602 461 aa10.74□□□□□ -0.69
ACTN4-207ENST00000495553 TMEM266Q2M3C6 531 aa10.74□□□□□ -0.69
ACTN4-207ENST00000495553 CCDC144BQ3MJ40 725 aa10.74□□□□□ -0.69
ACTN4-207ENST00000495553 LHX8Q68G74 356 aa10.74□□□□□ -0.69
ACTN4-207ENST00000495553 FAM173BQ6P4H8 233 aa10.74□□□□□ -0.69
ACTN4-207ENST00000495553 FBXO16Q8IX29 292 aaPredicted RBP10.74□□□□□ -0.69
ACTN4-207ENST00000495553 SLFN12Q8IYM2 578 aa10.74□□□□□ -0.69
ACTN4-207ENST00000495553 MORC4Q8TE76 937 aa10.74□□□□□ -0.69
ACTN4-207ENST00000495553 FERMT2Q96AC1 680 aa10.74□□□□□ -0.69
ACTN4-207ENST00000495553 PGBD1Q96JS3 809 aa10.74□□□□□ -0.69
ACTN4-207ENST00000495553 CRISPLD2Q9H0B8 497 aa10.74□□□□□ -0.69
ACTN4-207ENST00000495553 OGDHLQ9ULD0 1010 aa10.74□□□□□ -0.69
ACTN4-207ENST00000495553 DDX49Q9Y6V7 483 aaKnown RBP10.74□□□□□ -0.69
ACTN4-207ENST00000495553 PLXNB2O15031 1838 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 CYP3A7-CYP3A51PA0A087WV96 503 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 MAFGO15525 162 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 EIF3JO75822 258 aaKnown RBP10.73□□□□□ -0.69
ACTN4-207ENST00000495553 FARP2O94887 1054 aaPredicted RBP10.73□□□□□ -0.69
ACTN4-207ENST00000495553 NR3C2P08235 984 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 CYP3A7P24462 503 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 EDNRBP24530 442 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 CIITAP33076 1130 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 TNFAIP2Q03169 654 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 SLC39A14Q15043 492 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 PGM5Q15124 567 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 Q4G0T1 1027 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 CEP55Q53EZ4 464 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 PRR16Q569H4 304 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 ARL6IP4Q66PJ3 421 aaKnown RBP10.73□□□□□ -0.69
ACTN4-207ENST00000495553 IQSEC1Q6DN90 963 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 NIPA1Q7RTP0 329 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 ANKLE1Q8NAG6 615 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 ARRDC4Q8NCT1 418 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 USP28Q96RU2 1077 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 PDCD2LQ9BRP1 358 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 SPC25Q9HBM1 224 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 XPNPEP3Q9NQH7 507 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.73□□□□□ -0.69
ACTN4-207ENST00000495553 PCDHB6Q9Y5E3 794 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 CLIC4Q9Y696 253 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 ELP1O95163 1332 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 FRMPD4Q14CM0 1322 aa10.73□□□□□ -0.69
ACTN4-207ENST00000495553 FAM205CA6NFA0 338 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 TBX3O15119 743 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 PPP6R2O75170 966 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 DUSP11O75319 330 aaKnown RBP10.72□□□□□ -0.69
ACTN4-207ENST00000495553 OR52Z1P0C646 297 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 TXLNAP40222 546 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 PRPHP41219 470 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 ADCYAP1R1P41586 468 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 TOB1P50616 345 aaPredicted RBP10.72□□□□□ -0.69
ACTN4-207ENST00000495553 PTGDRQ13258 359 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 MTMR1Q13613 665 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 EARS2Q5JPH6 523 aaKnown RBP10.72□□□□□ -0.69
ACTN4-207ENST00000495553 KCNV1Q6PIU1 500 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 DTHD1Q6ZMT9 781 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 SEPT14Q6ZU15 432 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 RNF180Q86T96 592 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 PLA2G4DQ86XP0 818 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 KRI1Q8N9T8 703 aaKnown RBP10.72□□□□□ -0.69
ACTN4-207ENST00000495553 LINC00301Q8NCQ3 95 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 SCFD2Q8WU76 684 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 LEO1Q8WVC0 666 aaPredicted RBP10.72□□□□□ -0.69
ACTN4-207ENST00000495553 GPRASP2Q96D09 838 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 FAM20AQ96MK3 541 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 MXRA8Q9BRK3 442 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 WDR11Q9BZH6 1224 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 KATNBL1Q9H079 304 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 AP5M1Q9H0R1 490 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 PDGFCQ9NRA1 345 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 RCOR1Q9UKL0 485 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 STK24Q9Y6E0 443 aa10.72□□□□□ -0.69
ACTN4-207ENST00000495553 MORC2Q9Y6X9 1032 aaPredicted RBP10.72□□□□□ -0.69
ACTN4-207ENST00000495553 KIAA0100Q14667 2235 aaKnown RBP10.72□□□□□ -0.69
ACTN4-207ENST00000495553 KBTBD13C9JR72 458 aa10.71□□□□□ -0.69
ACTN4-207ENST00000495553 ADAMTS3O15072 1205 aa10.71□□□□□ -0.69
ACTN4-207ENST00000495553 CUTAO60888 179 aa10.71□□□□□ -0.69
ACTN4-207ENST00000495553 TDP2O95551 362 aa10.71□□□□□ -0.69
ACTN4-207ENST00000495553 PGK1P00558 417 aa10.71□□□□□ -0.69
ACTN4-207ENST00000495553 RGS19P49795 217 aa10.71□□□□□ -0.69
ACTN4-207ENST00000495553 ATP2C1P98194 919 aaPredicted RBP10.71□□□□□ -0.69
ACTN4-207ENST00000495553 TTLL4Q14679 1199 aa10.71□□□□□ -0.69
ACTN4-207ENST00000495553 TAPT1Q6NXT6 567 aa10.71□□□□□ -0.69
ACTN4-207ENST00000495553 NECAB2Q7Z6G3 386 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms