RNA–Protein interactions for RNA: ENST00000494595.1

CNNM3-205, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 5

Gene CNNM3, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-205ENST00000494595 MCOLN1Q9GZU1 580 aa16.02■□□□□ 0.16
CNNM3-205ENST00000494595 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.02■□□□□ 0.16
CNNM3-205ENST00000494595 KCNH7Q9NS40 1196 aa16.02■□□□□ 0.16
CNNM3-205ENST00000494595 DDX41Q9UJV9 622 aaKnown RBP16.02■□□□□ 0.16
CNNM3-205ENST00000494595 NOL7Q9UMY1 257 aaKnown RBP16.02■□□□□ 0.16
CNNM3-205ENST00000494595 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.01■□□□□ 0.15
CNNM3-205ENST00000494595 SEPT4O43236 478 aa16.01■□□□□ 0.15
CNNM3-205ENST00000494595 CCNT1O60563 726 aaKnown RBP16.01■□□□□ 0.15
CNNM3-205ENST00000494595 SETQ01105 290 aaPredicted RBP16.01■□□□□ 0.15
CNNM3-205ENST00000494595 SP2Q02086 613 aa16.01■□□□□ 0.15
CNNM3-205ENST00000494595 MTMR1Q13613 665 aa16.01■□□□□ 0.15
CNNM3-205ENST00000494595 NBR1Q14596 966 aa16.01■□□□□ 0.15
CNNM3-205ENST00000494595 TTLL4Q14679 1199 aa16.01■□□□□ 0.15
CNNM3-205ENST00000494595 FOXD4L5Q5VV16 416 aaPredicted RBP16.01■□□□□ 0.15
CNNM3-205ENST00000494595 KCNV1Q6PIU1 500 aa16.01■□□□□ 0.15
CNNM3-205ENST00000494595 FOXD4L4Q8WXT5 416 aaPredicted RBP16.01■□□□□ 0.15
CNNM3-205ENST00000494595 CDHR1Q96JP9 859 aa16.01■□□□□ 0.15
CNNM3-205ENST00000494595 SENP7Q9BQF6 1050 aa16.01■□□□□ 0.15
CNNM3-205ENST00000494595 AGO4Q9HCK5 861 aaKnown RBP16.01■□□□□ 0.15
CNNM3-205ENST00000494595 KCNMB3Q9NPA1 279 aa16.01■□□□□ 0.15
CNNM3-205ENST00000494595 DDX25Q9UHL0 483 aaKnown RBP16.01■□□□□ 0.15
CNNM3-205ENST00000494595 FAM184BQ9ULE4 1060 aa16.01■□□□□ 0.15
CNNM3-205ENST00000494595 GNEQ9Y223 722 aaKnown RBP16.01■□□□□ 0.15
CNNM3-205ENST00000494595 PCDHB6Q9Y5E3 794 aa16.01■□□□□ 0.15
CNNM3-205ENST00000494595 LRRC37A2A6NM11 1700 aa16.01■□□□□ 0.15
CNNM3-205ENST00000494595 POTEFA5A3E0 1075 aa16■□□□□ 0.15
CNNM3-205ENST00000494595 ATP9AO75110 1047 aa16■□□□□ 0.15
CNNM3-205ENST00000494595 AKR1A1P14550 325 aa16■□□□□ 0.15
CNNM3-205ENST00000494595 KCNA2P16389 499 aa16■□□□□ 0.15
CNNM3-205ENST00000494595 SMPD1P17405 629 aa16■□□□□ 0.15
CNNM3-205ENST00000494595 ATP2B1P20020 1258 aa16■□□□□ 0.15
CNNM3-205ENST00000494595 MTFR1Q15390 333 aa16■□□□□ 0.15
CNNM3-205ENST00000494595 ZNF174Q15697 407 aa16■□□□□ 0.15
CNNM3-205ENST00000494595 DUSP28Q4G0W2 176 aa16■□□□□ 0.15
CNNM3-205ENST00000494595 C4orf32Q8N8J7 132 aa16■□□□□ 0.15
CNNM3-205ENST00000494595 ETNPPLQ8TBG4 499 aa16■□□□□ 0.15
CNNM3-205ENST00000494595 HMX1Q9NP08 348 aaPredicted RBP16■□□□□ 0.15
CNNM3-205ENST00000494595 MRVI1Q9Y6F6 885 aa16■□□□□ 0.15
CNNM3-205ENST00000494595 PLXNA1Q9UIW2 1896 aa15.99■□□□□ 0.15
CNNM3-205ENST00000494595 TBX3O15119 743 aa15.99■□□□□ 0.15
CNNM3-205ENST00000494595 MSH4O15457 936 aa15.99■□□□□ 0.15
CNNM3-205ENST00000494595 DHX15O43143 795 aaKnown RBP15.99■□□□□ 0.15
CNNM3-205ENST00000494595 TXNP10599 105 aaKnown RBP15.99■□□□□ 0.15
CNNM3-205ENST00000494595 UBA1P22314 1058 aaKnown RBP15.99■□□□□ 0.15
CNNM3-205ENST00000494595 MCM7P33993 719 aa15.99■□□□□ 0.15
CNNM3-205ENST00000494595 TNFAIP2Q03169 654 aa15.99■□□□□ 0.15
CNNM3-205ENST00000494595 ITGB3BPQ13352 177 aaPredicted RBP15.99■□□□□ 0.15
CNNM3-205ENST00000494595 LY6KQ17RY6 165 aa15.99■□□□□ 0.15
CNNM3-205ENST00000494595 POTEDQ86YR6 584 aa15.99■□□□□ 0.15
CNNM3-205ENST00000494595 HAS1Q92839 578 aa15.99■□□□□ 0.15
CNNM3-205ENST00000494595 SLC5A5Q92911 643 aa15.99■□□□□ 0.15
CNNM3-205ENST00000494595 MTMR9Q96QG7 549 aa15.99■□□□□ 0.15
CNNM3-205ENST00000494595 UNC93B1Q9H1C4 597 aa15.99■□□□□ 0.15
CNNM3-205ENST00000494595 TMEM60Q9H2L4 133 aa15.99■□□□□ 0.15
CNNM3-205ENST00000494595 BCAS3Q9H6U6 928 aa15.99■□□□□ 0.15
CNNM3-205ENST00000494595 PAK6Q9NQU5 681 aaPredicted RBP15.99■□□□□ 0.15
CNNM3-205ENST00000494595 CHMP5Q9NZZ3 219 aa15.99■□□□□ 0.15
CNNM3-205ENST00000494595 Q9Y3F1 56 aa15.99■□□□□ 0.15
CNNM3-205ENST00000494595 NFASCO94856 1347 aa15.98■□□□□ 0.15
CNNM3-205ENST00000494595 IPO5O00410 1097 aaKnown RBP15.98■□□□□ 0.15
CNNM3-205ENST00000494595 NKRFO15226 690 aaKnown RBP eCLIP15.98■□□□□ 0.15
CNNM3-205ENST00000494595 NEMFO60524 1076 aa15.98■□□□□ 0.15
CNNM3-205ENST00000494595 DUSP11O75319 330 aaKnown RBP15.98■□□□□ 0.15
CNNM3-205ENST00000494595 PTGS1P23219 599 aa15.98■□□□□ 0.15
CNNM3-205ENST00000494595 NKX3-2P78367 333 aa15.98■□□□□ 0.15
CNNM3-205ENST00000494595 GJC2Q5T442 439 aaPredicted RBP15.98■□□□□ 0.15
CNNM3-205ENST00000494595 LHX8Q68G74 356 aa15.98■□□□□ 0.15
CNNM3-205ENST00000494595 COPS5Q92905 334 aa15.98■□□□□ 0.15
CNNM3-205ENST00000494595 EMID1Q96A84 441 aaPredicted RBP15.98■□□□□ 0.15
CNNM3-205ENST00000494595 USP28Q96RU2 1077 aa15.98■□□□□ 0.15
CNNM3-205ENST00000494595 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.98■□□□□ 0.15
CNNM3-205ENST00000494595 DDX20Q9UHI6 824 aaKnown RBP15.98■□□□□ 0.15
CNNM3-205ENST00000494595 MSCO60682 206 aa15.97■□□□□ 0.15
CNNM3-205ENST00000494595 PSMD10O75832 226 aa15.97■□□□□ 0.15
CNNM3-205ENST00000494595 CCL5P13501 91 aa15.97■□□□□ 0.15
CNNM3-205ENST00000494595 ARHGAP1Q07960 439 aa15.97■□□□□ 0.15
CNNM3-205ENST00000494595 NEDD9Q14511 834 aa15.97■□□□□ 0.15
CNNM3-205ENST00000494595 PTPAQ15257 358 aa15.97■□□□□ 0.15
CNNM3-205ENST00000494595 CELF3Q5SZQ8 465 aaKnown RBP15.97■□□□□ 0.15
CNNM3-205ENST00000494595 B3GNT9Q6UX72 402 aa15.97■□□□□ 0.15
CNNM3-205ENST00000494595 GJA10Q969M2 543 aa15.97■□□□□ 0.15
CNNM3-205ENST00000494595 LENG1Q96BZ8 264 aaPredicted RBP15.97■□□□□ 0.15
CNNM3-205ENST00000494595 FAM20AQ96MK3 541 aa15.97■□□□□ 0.15
CNNM3-205ENST00000494595 RIT2Q99578 217 aa15.97■□□□□ 0.15
CNNM3-205ENST00000494595 ZNF577Q9BSK1 485 aa15.97■□□□□ 0.15
CNNM3-205ENST00000494595 FTOQ9C0B1 505 aaKnown RBP eCLIP15.97■□□□□ 0.15
CNNM3-205ENST00000494595 POLR3EQ9NVU0 708 aa15.97■□□□□ 0.15
CNNM3-205ENST00000494595 MORC2Q9Y6X9 1032 aaPredicted RBP15.97■□□□□ 0.15
CNNM3-205ENST00000494595 CTAGE5O15320 804 aa15.96■□□□□ 0.15
CNNM3-205ENST00000494595 FARP2O94887 1054 aaPredicted RBP15.96■□□□□ 0.15
CNNM3-205ENST00000494595 GGPS1O95749 300 aa15.96■□□□□ 0.15
CNNM3-205ENST00000494595 GH1P01241 217 aa15.96■□□□□ 0.15
CNNM3-205ENST00000494595 CNGA1P29973 690 aa15.96■□□□□ 0.15
CNNM3-205ENST00000494595 NASPP49321 788 aaPredicted RBP15.96■□□□□ 0.15
CNNM3-205ENST00000494595 ATP2C1P98194 919 aaPredicted RBP15.96■□□□□ 0.15
CNNM3-205ENST00000494595 PTGDRQ13258 359 aa15.96■□□□□ 0.15
CNNM3-205ENST00000494595 SF3A1Q15459 793 aaKnown RBP15.96■□□□□ 0.15
CNNM3-205ENST00000494595 COL13A1Q5TAT6 717 aaPredicted RBP15.96■□□□□ 0.15
CNNM3-205ENST00000494595 ANO1Q5XXA6 986 aa15.96■□□□□ 0.15
CNNM3-205ENST00000494595 ATL3Q6DD88 541 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms