RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 KINO60870 393 aaKnown RBP14.29□□□□□ -0.12
VPS52-220ENST00000493674 STAM2O75886 525 aa14.29□□□□□ -0.12
VPS52-220ENST00000493674 NR3C2P08235 984 aa14.29□□□□□ -0.12
VPS52-220ENST00000493674 EIF2AK2P19525 551 aaKnown RBP14.29□□□□□ -0.12
VPS52-220ENST00000493674 CCND2P30279 289 aa14.29□□□□□ -0.12
VPS52-220ENST00000493674 TXKP42681 527 aa14.29□□□□□ -0.12
VPS52-220ENST00000493674 ZNF445P59923 1031 aa14.29□□□□□ -0.12
VPS52-220ENST00000493674 TPRNQ4KMQ1 711 aa14.29□□□□□ -0.12
VPS52-220ENST00000493674 ARHGEF16Q5VV41 709 aa14.29□□□□□ -0.12
VPS52-220ENST00000493674 B3GNT9Q6UX72 402 aa14.29□□□□□ -0.12
VPS52-220ENST00000493674 PLA2G4DQ86XP0 818 aa14.29□□□□□ -0.12
VPS52-220ENST00000493674 ABRAQ8N0Z2 381 aa14.29□□□□□ -0.12
VPS52-220ENST00000493674 ANKRD35Q8N283 1001 aa14.29□□□□□ -0.12
VPS52-220ENST00000493674 ANKRD13CQ8N6S4 541 aa14.29□□□□□ -0.12
VPS52-220ENST00000493674 INPP4AQ96PE3 977 aaPredicted RBP14.29□□□□□ -0.12
VPS52-220ENST00000493674 ZIC5Q96T25 663 aa14.29□□□□□ -0.12
VPS52-220ENST00000493674 MMTAG2Q9BU76 263 aaKnown RBP14.29□□□□□ -0.12
VPS52-220ENST00000493674 TTC12Q9H892 705 aaPredicted RBP14.29□□□□□ -0.12
VPS52-220ENST00000493674 JADE2Q9NQC1 790 aa14.29□□□□□ -0.12
VPS52-220ENST00000493674 PP2D1A8MPX8 630 aa14.28□□□□□ -0.12
VPS52-220ENST00000493674 PSMD10O75832 226 aa14.28□□□□□ -0.12
VPS52-220ENST00000493674 ZNF76P36508 570 aa14.28□□□□□ -0.12
VPS52-220ENST00000493674 TECP42680 631 aa14.28□□□□□ -0.12
VPS52-220ENST00000493674 ALDH5A1P51649 535 aaPredicted RBP14.28□□□□□ -0.12
VPS52-220ENST00000493674 CNTN2Q02246 1040 aa14.28□□□□□ -0.12
VPS52-220ENST00000493674 TAF1CQ15572 869 aaPredicted RBP14.28□□□□□ -0.12
VPS52-220ENST00000493674 TMEM266Q2M3C6 531 aa14.28□□□□□ -0.12
VPS52-220ENST00000493674 C17orf99Q6UX52 265 aa14.28□□□□□ -0.12
VPS52-220ENST00000493674 KRBA2Q6ZNG9 492 aa14.28□□□□□ -0.12
VPS52-220ENST00000493674 MORC4Q8TE76 937 aa14.28□□□□□ -0.12
VPS52-220ENST00000493674 GPRASP2Q96D09 838 aa14.28□□□□□ -0.12
VPS52-220ENST00000493674 MMP19Q99542 508 aa14.28□□□□□ -0.12
VPS52-220ENST00000493674 RAB34Q9BZG1 259 aa14.28□□□□□ -0.12
VPS52-220ENST00000493674 EFCC1Q9HA90 598 aa14.28□□□□□ -0.12
VPS52-220ENST00000493674 USP25Q9UHP3 1055 aa14.28□□□□□ -0.12
VPS52-220ENST00000493674 POTEMA6NI47 508 aa14.27□□□□□ -0.13
VPS52-220ENST00000493674 POTEB2H3BUK9 544 aa14.27□□□□□ -0.13
VPS52-220ENST00000493674 CTAGE5O15320 804 aa14.27□□□□□ -0.13
VPS52-220ENST00000493674 TLR2O60603 784 aa14.27□□□□□ -0.13
VPS52-220ENST00000493674 RGS20O76081 388 aa14.27□□□□□ -0.13
VPS52-220ENST00000493674 ARP10275 920 aa14.27□□□□□ -0.13
VPS52-220ENST00000493674 FCER1AP12319 257 aa14.27□□□□□ -0.13
VPS52-220ENST00000493674 CTCFP49711 727 aaPredicted RBP14.27□□□□□ -0.13
VPS52-220ENST00000493674 SEMA3FQ13275 785 aa14.27□□□□□ -0.13
VPS52-220ENST00000493674 PPP2R5CQ13362 524 aa14.27□□□□□ -0.13
VPS52-220ENST00000493674 LONRF3Q496Y0 759 aa14.27□□□□□ -0.13
VPS52-220ENST00000493674 HYIQ5T013 277 aa14.27□□□□□ -0.13
VPS52-220ENST00000493674 PDXDC2PQ6P474 469 aa14.27□□□□□ -0.13
VPS52-220ENST00000493674 GJA10Q969M2 543 aa14.27□□□□□ -0.13
VPS52-220ENST00000493674 RIT2Q99578 217 aa14.27□□□□□ -0.13
VPS52-220ENST00000493674 PYM1Q9BRP8 204 aaKnown RBP14.27□□□□□ -0.13
VPS52-220ENST00000493674 FUCA2Q9BTY2 467 aa14.27□□□□□ -0.13
VPS52-220ENST00000493674 KCNH7Q9NS40 1196 aa14.27□□□□□ -0.13
VPS52-220ENST00000493674 ADD3Q9UEY8 706 aaKnown RBP14.27□□□□□ -0.13
VPS52-220ENST00000493674 LRWD1Q9UFC0 647 aa14.27□□□□□ -0.13
VPS52-220ENST00000493674 PCDHA12Q9UN75 941 aa14.27□□□□□ -0.13
VPS52-220ENST00000493674 POLR2DO15514 142 aaKnown RBP14.26□□□□□ -0.13
VPS52-220ENST00000493674 DHX15O43143 795 aaKnown RBP14.26□□□□□ -0.13
VPS52-220ENST00000493674 STRNO43815 780 aa14.26□□□□□ -0.13
VPS52-220ENST00000493674 LETM1O95202 739 aaPredicted RBP14.26□□□□□ -0.13
VPS52-220ENST00000493674 ALDH1A1P00352 501 aa14.26□□□□□ -0.13
VPS52-220ENST00000493674 CDC25AP30304 524 aa14.26□□□□□ -0.13
VPS52-220ENST00000493674 MAPK4P31152 587 aa14.26□□□□□ -0.13
VPS52-220ENST00000493674 TXLNAP40222 546 aa14.26□□□□□ -0.13
VPS52-220ENST00000493674 MDM2Q00987 491 aaPredicted RBP14.26□□□□□ -0.13
VPS52-220ENST00000493674 GRB14Q14449 540 aa14.26□□□□□ -0.13
VPS52-220ENST00000493674 KCTD2Q14681 263 aa14.26□□□□□ -0.13
VPS52-220ENST00000493674 NAALADL2Q58DX5 795 aa14.26□□□□□ -0.13
VPS52-220ENST00000493674 SH3RF1Q7Z6J0 888 aa14.26□□□□□ -0.13
VPS52-220ENST00000493674 CABP7Q86V35 215 aa14.26□□□□□ -0.13
VPS52-220ENST00000493674 LRRC15Q8TF66 581 aa14.26□□□□□ -0.13
VPS52-220ENST00000493674 CFHR5Q9BXR6 569 aa14.26□□□□□ -0.13
VPS52-220ENST00000493674 WDR11Q9BZH6 1224 aa14.26□□□□□ -0.13
VPS52-220ENST00000493674 GZF1Q9H116 711 aaPredicted RBP14.26□□□□□ -0.13
VPS52-220ENST00000493674 TNMDQ9H2S6 317 aa14.26□□□□□ -0.13
VPS52-220ENST00000493674 AGO4Q9HCK5 861 aaKnown RBP14.26□□□□□ -0.13
VPS52-220ENST00000493674 DISC1Q9NRI5 854 aa14.26□□□□□ -0.13
VPS52-220ENST00000493674 SYCE3A1L190 88 aa14.25□□□□□ -0.13
VPS52-220ENST00000493674 IPO5O00410 1097 aaKnown RBP14.25□□□□□ -0.13
VPS52-220ENST00000493674 FOXN1O15353 648 aa14.25□□□□□ -0.13
VPS52-220ENST00000493674 MAFGO15525 162 aa14.25□□□□□ -0.13
VPS52-220ENST00000493674 SLFN14P0C7P3 912 aa14.25□□□□□ -0.13
VPS52-220ENST00000493674 MYCLP12524 364 aaPredicted RBP14.25□□□□□ -0.13
VPS52-220ENST00000493674 ICAM3P32942 547 aa14.25□□□□□ -0.13
VPS52-220ENST00000493674 UBA7P41226 1012 aa14.25□□□□□ -0.13
VPS52-220ENST00000493674 GRB10Q13322 594 aa14.25□□□□□ -0.13
VPS52-220ENST00000493674 CRHR2Q13324 411 aa14.25□□□□□ -0.13
VPS52-220ENST00000493674 ITGB3BPQ13352 177 aaPredicted RBP14.25□□□□□ -0.13
VPS52-220ENST00000493674 MTMR1Q13613 665 aa14.25□□□□□ -0.13
VPS52-220ENST00000493674 KARSQ15046 597 aaKnown RBP14.25□□□□□ -0.13
VPS52-220ENST00000493674 ZNF792Q3KQV3 632 aa14.25□□□□□ -0.13
VPS52-220ENST00000493674 TMEM119Q4V9L6 283 aa14.25□□□□□ -0.13
VPS52-220ENST00000493674 OTOP1Q7RTM1 612 aa14.25□□□□□ -0.13
VPS52-220ENST00000493674 GPR142Q7Z601 462 aa14.25□□□□□ -0.13
VPS52-220ENST00000493674 ZNF467Q7Z7K2 595 aaPredicted RBP14.25□□□□□ -0.13
VPS52-220ENST00000493674 ZFP91Q96JP5 570 aaPredicted RBP14.25□□□□□ -0.13
VPS52-220ENST00000493674 PNMA5Q96PV4 448 aa14.25□□□□□ -0.13
VPS52-220ENST00000493674 NUDT12Q9BQG2 462 aa14.25□□□□□ -0.13
VPS52-220ENST00000493674 ZNF577Q9BSK1 485 aa14.25□□□□□ -0.13
VPS52-220ENST00000493674 SERTAD1Q9UHV2 236 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms