RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 FTOQ9C0B1 505 aaKnown RBP eCLIP16.93■□□□□ 0.3
ATG4B-223ENST00000493618 BCAS3Q9H6U6 928 aa16.93■□□□□ 0.3
ATG4B-223ENST00000493618 hCG_1642624A0A1W2PR95 340 aa16.92■□□□□ 0.3
ATG4B-223ENST00000493618 KIF5BP33176 963 aa16.92■□□□□ 0.3
ATG4B-223ENST00000493618 KIAA0753Q2KHM9 967 aa16.92■□□□□ 0.3
ATG4B-223ENST00000493618 HSDL1Q3SXM5 330 aa16.92■□□□□ 0.3
ATG4B-223ENST00000493618 USP17L6PQ6QN14 398 aa16.92■□□□□ 0.3
ATG4B-223ENST00000493618 CENPQQ7L2Z9 268 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-223ENST00000493618 USP38Q8NB14 1042 aa16.92■□□□□ 0.3
ATG4B-223ENST00000493618 DHX38Q92620 1227 aaKnown RBP16.92■□□□□ 0.3
ATG4B-223ENST00000493618 TMEM87BQ96K49 555 aa16.92■□□□□ 0.3
ATG4B-223ENST00000493618 RTEL1Q9NZ71 1219 aa16.92■□□□□ 0.3
ATG4B-223ENST00000493618 SEC63Q9UGP8 760 aaKnown RBP16.92■□□□□ 0.3
ATG4B-223ENST00000493618 MYO9BQ13459 2157 aa16.92■□□□□ 0.3
ATG4B-223ENST00000493618 PITPNM1O00562 1244 aa16.91■□□□□ 0.3
ATG4B-223ENST00000493618 PFKMP08237 780 aa16.91■□□□□ 0.3
ATG4B-223ENST00000493618 ATP2A2P16615 1042 aaKnown RBP16.91■□□□□ 0.3
ATG4B-223ENST00000493618 RFC2P35250 354 aa16.91■□□□□ 0.3
ATG4B-223ENST00000493618 MRPS9P82933 396 aaKnown RBP16.91■□□□□ 0.3
ATG4B-223ENST00000493618 ZNF200P98182 395 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-223ENST00000493618 BMP2KLQ5H9B9 411 aa16.91■□□□□ 0.3
ATG4B-223ENST00000493618 KCNV1Q6PIU1 500 aa16.91■□□□□ 0.3
ATG4B-223ENST00000493618 SESTD1Q86VW0 696 aa16.91■□□□□ 0.3
ATG4B-223ENST00000493618 CCDC82Q8N4S0 544 aa16.91■□□□□ 0.3
ATG4B-223ENST00000493618 CCDC155Q8N6L0 562 aa16.91■□□□□ 0.3
ATG4B-223ENST00000493618 SMARCC2Q8TAQ2 1214 aa16.91■□□□□ 0.3
ATG4B-223ENST00000493618 PPM1EQ8WY54 764 aa16.91■□□□□ 0.3
ATG4B-223ENST00000493618 MAP3K14Q99558 947 aa16.91■□□□□ 0.3
ATG4B-223ENST00000493618 MLXIPQ9HAP2 919 aa16.91■□□□□ 0.3
ATG4B-223ENST00000493618 SLC28A3Q9HAS3 691 aa16.91■□□□□ 0.3
ATG4B-223ENST00000493618 GTF2IRD1Q9UHL9 959 aa16.91■□□□□ 0.3
ATG4B-223ENST00000493618 F2P00734 622 aa16.9■□□□□ 0.3
ATG4B-223ENST00000493618 ACTN1P12814 892 aa16.9■□□□□ 0.3
ATG4B-223ENST00000493618 HIC1Q14526 733 aa16.9■□□□□ 0.3
ATG4B-223ENST00000493618 CUL5Q93034 780 aa16.9■□□□□ 0.3
ATG4B-223ENST00000493618 TCEANC2Q96MN5 208 aa16.9■□□□□ 0.3
ATG4B-223ENST00000493618 GAS2L1Q99501 681 aaPredicted RBP16.9■□□□□ 0.3
ATG4B-223ENST00000493618 KATNAL1Q9BW62 490 aa16.9■□□□□ 0.3
ATG4B-223ENST00000493618 SLC12A7Q9Y666 1083 aa16.9■□□□□ 0.3
ATG4B-223ENST00000493618 FRMPD4Q14CM0 1322 aa16.9■□□□□ 0.3
ATG4B-223ENST00000493618 KAT6AQ92794 2004 aa16.89■□□□□ 0.29
ATG4B-223ENST00000493618 HAS3O00219 553 aa16.89■□□□□ 0.29
ATG4B-223ENST00000493618 GNAQP50148 359 aa16.89■□□□□ 0.29
ATG4B-223ENST00000493618 SEMA3FQ13275 785 aa16.89■□□□□ 0.29
ATG4B-223ENST00000493618 LRRC8DQ7L1W4 858 aa16.89■□□□□ 0.29
ATG4B-223ENST00000493618 MICU3Q86XE3 530 aa16.89■□□□□ 0.29
ATG4B-223ENST00000493618 TMTC2Q8N394 836 aa16.89■□□□□ 0.29
ATG4B-223ENST00000493618 CAGE1Q8TC20 777 aa16.89■□□□□ 0.29
ATG4B-223ENST00000493618 AFAP1L1Q8TED9 768 aa16.89■□□□□ 0.29
ATG4B-223ENST00000493618 WNT8BQ93098 351 aa16.89■□□□□ 0.29
ATG4B-223ENST00000493618 LZTS2Q9BRK4 669 aa16.89■□□□□ 0.29
ATG4B-223ENST00000493618 MTA3Q9BTC8 594 aa16.89■□□□□ 0.29
ATG4B-223ENST00000493618 COL25A1Q9BXS0 654 aaPredicted RBP16.89■□□□□ 0.29
ATG4B-223ENST00000493618 CHD7Q9P2D1 2997 aa16.89■□□□□ 0.29
ATG4B-223ENST00000493618 TELO2Q9Y4R8 837 aa16.89■□□□□ 0.29
ATG4B-223ENST00000493618 REV3LO60673 3130 aa16.89■□□□□ 0.29
ATG4B-223ENST00000493618 MEIS2O14770 477 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 PPFIA4O75335 1185 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 CALM1P0DP23 149 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 CALM2P0DP24 149 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 CALM3P0DP25 149 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 CKBP12277 381 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 HOXD8P13378 290 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-223ENST00000493618 SELPP16109 830 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 IGFBP4P22692 258 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 SMARCA1P28370 1054 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 LIFRP42702 1097 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 ADGRE1Q14246 886 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 GPNMBQ14956 572 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 UBE2SQ16763 222 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 TCTN1Q2MV58 587 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 GNPTABQ3T906 1256 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 PPP2R2DQ66LE6 453 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 CYFIP1Q7L576 1253 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 C16orf70Q9BSU1 422 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 PRDM6Q9NQX0 595 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 PCDHA11Q9Y5I1 949 aa16.88■□□□□ 0.29
ATG4B-223ENST00000493618 COL4A4P53420 1690 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-223ENST00000493618 TGFB3P10600 412 aa16.87■□□□□ 0.29
ATG4B-223ENST00000493618 SP4Q02446 784 aa16.87■□□□□ 0.29
ATG4B-223ENST00000493618 CCDC85BQ15834 202 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-223ENST00000493618 TMTC3Q6ZXV5 915 aa16.87■□□□□ 0.29
ATG4B-223ENST00000493618 TMCO2Q7Z6W1 182 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-223ENST00000493618 FANCBQ8NB91 859 aa16.87■□□□□ 0.29
ATG4B-223ENST00000493618 INPP4AQ96PE3 977 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-223ENST00000493618 NEK1Q96PY6 1258 aa16.87■□□□□ 0.29
ATG4B-223ENST00000493618 CERS4Q9HA82 394 aa16.87■□□□□ 0.29
ATG4B-223ENST00000493618 MICAL3Q7RTP6 2002 aa16.87■□□□□ 0.29
ATG4B-223ENST00000493618 SPATA31C2B4DYI2 1134 aa16.86■□□□□ 0.29
ATG4B-223ENST00000493618 PIK3CDO00329 1044 aa16.86■□□□□ 0.29
ATG4B-223ENST00000493618 NOP56O00567 594 aaKnown RBP16.86■□□□□ 0.29
ATG4B-223ENST00000493618 NBNO60934 754 aa16.86■□□□□ 0.29
ATG4B-223ENST00000493618 CDC45O75419 566 aa16.86■□□□□ 0.29
ATG4B-223ENST00000493618 LGALS2P05162 132 aa16.86■□□□□ 0.29
ATG4B-223ENST00000493618 CA3P07451 260 aa16.86■□□□□ 0.29
ATG4B-223ENST00000493618 ICAM3P32942 547 aa16.86■□□□□ 0.29
ATG4B-223ENST00000493618 PTK7Q13308 1070 aa16.86■□□□□ 0.29
ATG4B-223ENST00000493618 TRIM71Q2Q1W2 868 aaKnown RBP16.86■□□□□ 0.29
ATG4B-223ENST00000493618 ADCK5Q3MIX3 580 aa16.86■□□□□ 0.29
ATG4B-223ENST00000493618 ZNF618Q5T7W0 954 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms