RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 TSPYL1Q9H0U9 437 aa7.89□□□□□ -1.15
HERC4-211ENST00000492996 FRMPD2Q68DX3 1309 aaPredicted RBP7.89□□□□□ -1.15
HERC4-211ENST00000492996 NRDCO43847 1150 aa7.89□□□□□ -1.15
HERC4-211ENST00000492996 RAD21O60216 631 aa7.89□□□□□ -1.15
HERC4-211ENST00000492996 BMP15O95972 392 aa7.89□□□□□ -1.15
HERC4-211ENST00000492996 CALML3P27482 149 aa7.89□□□□□ -1.15
HERC4-211ENST00000492996 SMAD3P84022 425 aaKnown RBP7.89□□□□□ -1.15
HERC4-211ENST00000492996 ATP2B2Q01814 1243 aa7.89□□□□□ -1.15
HERC4-211ENST00000492996 CPLX3Q8WVH0 158 aa7.89□□□□□ -1.15
HERC4-211ENST00000492996 KCNH6Q9H252 994 aa7.89□□□□□ -1.15
HERC4-211ENST00000492996 SLC25A27O95847 323 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 HMGCRP04035 888 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 NAPAP54920 295 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 ADKP55263 362 aaKnown RBP7.88□□□□□ -1.15
HERC4-211ENST00000492996 VSTM4Q8IW00 320 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 LRRC47Q8N1G4 583 aaKnown RBP7.88□□□□□ -1.15
HERC4-211ENST00000492996 ARHGAP39Q9C0H5 1083 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 TMEM60Q9H2L4 133 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 TMOD2Q9NZR1 351 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 DACH1Q9UI36 760 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 PCDHA4Q9UN74 947 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 TTF2Q9UNY4 1162 aaKnown RBP7.88□□□□□ -1.15
HERC4-211ENST00000492996 CSADQ9Y600 493 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 KMT2EQ8IZD2 1858 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 RPTORQ8N122 1335 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 USP17L5A8MUK1 530 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 SGPL1O95470 568 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 PARP1P09874 1014 aaKnown RBP7.88□□□□□ -1.15
HERC4-211ENST00000492996 OSBPP22059 807 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 HOXC8P31273 242 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 GNAQP50148 359 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 CUL4BQ13620 913 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 ANKRD33Q7Z3H0 272 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 IQUBQ8NA54 791 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 EMID1Q96A84 441 aaPredicted RBP7.88□□□□□ -1.15
HERC4-211ENST00000492996 APBA2Q99767 749 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 MROH8Q9H579 483 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 NYAP2Q9P242 653 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 CLEC11AQ9Y240 323 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 KIAA0355O15063 1070 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 TEX33O43247 280 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 C1RP00736 705 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 SLC20A2Q08357 652 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 DHX8Q14562 1220 aaKnown RBP7.88□□□□□ -1.15
HERC4-211ENST00000492996 LETM2Q2VYF4 491 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 NT5DC1Q5TFE4 455 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 RRAGBQ5VZM2 374 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 SYT10Q6XYQ8 523 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 KLHDC9Q8NEP7 349 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 ENOX1Q8TC92 643 aaKnown RBP7.88□□□□□ -1.15
HERC4-211ENST00000492996 RSPH1Q8WYR4 309 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 PIGSQ96S52 555 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 HTATIP2Q9BUP3 242 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 DNAJC18Q9H819 358 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 ZNF287Q9HBT7 754 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 PCDHA6Q9UN73 950 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 CTNND2Q9UQB3 1225 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 PCDHA8Q9Y5H6 950 aa7.88□□□□□ -1.15
HERC4-211ENST00000492996 KIF26AQ9ULI4 1882 aaPredicted RBP7.88□□□□□ -1.15
HERC4-211ENST00000492996 PALM3A6NDB9 673 aaPredicted RBP7.87□□□□□ -1.15
HERC4-211ENST00000492996 SMARCA1P28370 1054 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 CACNB3P54284 484 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 DPYDQ12882 1025 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 JAKMIP3Q5VZ66 844 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 NYAP1Q6ZVC0 841 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 EEF2KMTQ96G04 330 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 PPP1R13BQ96KQ4 1090 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 MTRQ99707 1265 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 GPCPD1Q9NPB8 672 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 SYNRGQ9UMZ2 1314 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 STXBP3O00186 592 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 ASNSP08243 561 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 CYBAP13498 195 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 RFC2P35250 354 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 GTF2F1P35269 517 aaKnown RBP eCLIP7.87□□□□□ -1.153e-9■□□□□ 10.1
HERC4-211ENST00000492996 STAT6P42226 847 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 BACE1P56817 501 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 LHX8Q68G74 356 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 POTEEQ6S8J3 1075 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 DTHD1Q6ZMT9 781 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 TRIML1Q8N9V2 468 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 ZNF280CQ8ND82 737 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 NEDD1Q8NHV4 660 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 SPATA20Q8TB22 786 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 GMCL1Q96IK5 515 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 KATNBL1Q9H079 304 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 DDX4Q9NQI0 724 aaKnown RBP7.87□□□□□ -1.15
HERC4-211ENST00000492996 BIN2Q9UBW5 565 aaPredicted RBP7.87□□□□□ -1.15
HERC4-211ENST00000492996 SMCO2A6NFE2 343 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 FAM196BA6NMK8 535 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 DNM1LO00429 736 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 MPHOSPH10O00566 681 aaKnown RBP7.87□□□□□ -1.15
HERC4-211ENST00000492996 AKR1B1P15121 316 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 ZNF18P17022 549 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 CCT6AP40227 531 aaKnown RBP7.87□□□□□ -1.15
HERC4-211ENST00000492996 UBA7P41226 1012 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 TRAPPC10P48553 1259 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 SH3RF1Q7Z6J0 888 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 CCDC148Q8NFR7 591 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 COA7Q96BR5 231 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms