RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 SP2Q02086 613 aa21.24■□□□□ 0.99
SMIM4-205ENST00000491607 GPKOWQ92917 476 aaPredicted RBP eCLIP21.24■□□□□ 0.99
SMIM4-205ENST00000491607 CTAGE1Q96RT6 745 aa21.24■□□□□ 0.99
SMIM4-205ENST00000491607 MAP3K14Q99558 947 aa21.24■□□□□ 0.99
SMIM4-205ENST00000491607 SPZ1Q9BXG8 430 aa21.24■□□□□ 0.99
SMIM4-205ENST00000491607 ANO2Q9NQ90 1003 aa21.24■□□□□ 0.99
SMIM4-205ENST00000491607 SCN5AQ14524 2016 aa21.24■□□□□ 0.99
SMIM4-205ENST00000491607 SH2B2O14492 632 aaPredicted RBP21.23■□□□□ 0.99
SMIM4-205ENST00000491607 PPFIA4O75335 1185 aa21.23■□□□□ 0.99
SMIM4-205ENST00000491607 SELPP16109 830 aa21.23■□□□□ 0.99
SMIM4-205ENST00000491607 GNPTABQ3T906 1256 aa21.23■□□□□ 0.99
SMIM4-205ENST00000491607 LRRC8DQ7L1W4 858 aa21.23■□□□□ 0.99
SMIM4-205ENST00000491607 TMTC2Q8N394 836 aa21.23■□□□□ 0.99
SMIM4-205ENST00000491607 SMARCC2Q8TAQ2 1214 aa21.23■□□□□ 0.99
SMIM4-205ENST00000491607 TMEM87BQ96K49 555 aa21.23■□□□□ 0.99
SMIM4-205ENST00000491607 SLC9A7Q96T83 725 aa21.23■□□□□ 0.99
SMIM4-205ENST00000491607 LZTS2Q9BRK4 669 aa21.23■□□□□ 0.99
SMIM4-205ENST00000491607 MTA3Q9BTC8 594 aa21.23■□□□□ 0.99
SMIM4-205ENST00000491607 GBF1Q92538 1859 aa21.23■□□□□ 0.99
SMIM4-205ENST00000491607 HAS3O00219 553 aa21.22■□□□□ 0.99
SMIM4-205ENST00000491607 PLEKHA8P1O95397 391 aa21.22■□□□□ 0.99
SMIM4-205ENST00000491607 RXRAP19793 462 aa21.22■□□□□ 0.99
SMIM4-205ENST00000491607 ADGRE1Q14246 886 aa21.22■□□□□ 0.99
SMIM4-205ENST00000491607 CREB3L3Q68CJ9 461 aa21.22■□□□□ 0.99
SMIM4-205ENST00000491607 CMTR1Q8N1G2 835 aaKnown RBP21.22■□□□□ 0.99
SMIM4-205ENST00000491607 DHX38Q92620 1227 aaKnown RBP21.22■□□□□ 0.99
SMIM4-205ENST00000491607 CUL5Q93034 780 aa21.22■□□□□ 0.99
SMIM4-205ENST00000491607 NOP56O00567 594 aaKnown RBP21.21■□□□□ 0.99
SMIM4-205ENST00000491607 BAIAP3O94812 1187 aa21.21■□□□□ 0.99
SMIM4-205ENST00000491607 CA3P07451 260 aa21.21■□□□□ 0.99
SMIM4-205ENST00000491607 CKBP12277 381 aa21.21■□□□□ 0.99
SMIM4-205ENST00000491607 HOXD8P13378 290 aaPredicted RBP21.21■□□□□ 0.99
SMIM4-205ENST00000491607 KCNJ6P48051 423 aa21.21■□□□□ 0.99
SMIM4-205ENST00000491607 GNAQP50148 359 aa21.21■□□□□ 0.99
SMIM4-205ENST00000491607 MRPS9P82933 396 aaKnown RBP21.21■□□□□ 0.99
SMIM4-205ENST00000491607 CCDC85BQ15834 202 aaPredicted RBP21.21■□□□□ 0.99
SMIM4-205ENST00000491607 USP17L6PQ6QN14 398 aa21.21■□□□□ 0.99
SMIM4-205ENST00000491607 RAB11FIP4Q86YS3 637 aa21.21■□□□□ 0.99
SMIM4-205ENST00000491607 RTEL1Q9NZ71 1219 aa21.21■□□□□ 0.99
SMIM4-205ENST00000491607 STAM2O75886 525 aa21.2■□□□□ 0.98
SMIM4-205ENST00000491607 CALM1P0DP23 149 aa21.2■□□□□ 0.98
SMIM4-205ENST00000491607 CALM2P0DP24 149 aa21.2■□□□□ 0.98
SMIM4-205ENST00000491607 CALM3P0DP25 149 aa21.2■□□□□ 0.98
SMIM4-205ENST00000491607 SMARCA1P28370 1054 aa21.2■□□□□ 0.98
SMIM4-205ENST00000491607 ZNF200P98182 395 aaPredicted RBP21.2■□□□□ 0.98
SMIM4-205ENST00000491607 PTK7Q13308 1070 aa21.2■□□□□ 0.98
SMIM4-205ENST00000491607 COL9A3Q14050 684 aaPredicted RBP21.2■□□□□ 0.98
SMIM4-205ENST00000491607 SKAP1Q86WV1 359 aa21.2■□□□□ 0.98
SMIM4-205ENST00000491607 HERC6Q8IVU3 1022 aa21.2■□□□□ 0.98
SMIM4-205ENST00000491607 PHOSPHO2Q8TCD6 241 aa21.2■□□□□ 0.98
SMIM4-205ENST00000491607 LRRC2Q9BYS8 371 aa21.2■□□□□ 0.98
SMIM4-205ENST00000491607 PRDM6Q9NQX0 595 aa21.2■□□□□ 0.98
SMIM4-205ENST00000491607 SLC12A7Q9Y666 1083 aa21.2■□□□□ 0.98
SMIM4-205ENST00000491607 FRMPD4Q14CM0 1322 aa21.2■□□□□ 0.98
SMIM4-205ENST00000491607 PRUNE2Q8WUY3 3088 aa21.19■□□□□ 0.98
SMIM4-205ENST00000491607 KIF28PB7ZC32 967 aa21.19■□□□□ 0.98
SMIM4-205ENST00000491607 RBL2Q08999 1139 aa21.19■□□□□ 0.98
SMIM4-205ENST00000491607 NECTIN1Q15223 517 aa21.19■□□□□ 0.98
SMIM4-205ENST00000491607 SRBD1Q8N5C6 995 aaKnown RBP21.19■□□□□ 0.98
SMIM4-205ENST00000491607 INPP4AQ96PE3 977 aaPredicted RBP21.19■□□□□ 0.98
SMIM4-205ENST00000491607 C16orf70Q9BSU1 422 aa21.19■□□□□ 0.98
SMIM4-205ENST00000491607 BCAS3Q9H6U6 928 aa21.19■□□□□ 0.98
SMIM4-205ENST00000491607 VCANP13611 3396 aa21.18■□□□□ 0.98
SMIM4-205ENST00000491607 SPATA31C2B4DYI2 1134 aa21.18■□□□□ 0.98
SMIM4-205ENST00000491607 H3BRB1 525 aa21.18■□□□□ 0.98
SMIM4-205ENST00000491607 FIBPO43427 364 aa21.18■□□□□ 0.98
SMIM4-205ENST00000491607 PARNO95453 639 aaKnown RBP21.18■□□□□ 0.98
SMIM4-205ENST00000491607 ICAM3P32942 547 aa21.18■□□□□ 0.98
SMIM4-205ENST00000491607 LIFRP42702 1097 aa21.18■□□□□ 0.98
SMIM4-205ENST00000491607 NEDD9Q14511 834 aa21.18■□□□□ 0.98
SMIM4-205ENST00000491607 GPNMBQ14956 572 aa21.18■□□□□ 0.98
SMIM4-205ENST00000491607 BMP2KLQ5H9B9 411 aa21.18■□□□□ 0.98
SMIM4-205ENST00000491607 CENPQQ7L2Z9 268 aaPredicted RBP21.18■□□□□ 0.98
SMIM4-205ENST00000491607 CYFIP1Q7L576 1253 aa21.18■□□□□ 0.98
SMIM4-205ENST00000491607 CCDC82Q8N4S0 544 aa21.18■□□□□ 0.98
SMIM4-205ENST00000491607 TUT1Q9H6E5 874 aaKnown RBP21.18■□□□□ 0.98
SMIM4-205ENST00000491607 CERS4Q9HA82 394 aa21.18■□□□□ 0.98
SMIM4-205ENST00000491607 CHD9Q3L8U1 2897 aa21.18■□□□□ 0.98
SMIM4-205ENST00000491607 BAZ2BQ9UIF8 2168 aaKnown RBP21.17■□□□□ 0.98
SMIM4-205ENST00000491607 PIK3CDO00329 1044 aa21.17■□□□□ 0.98
SMIM4-205ENST00000491607 MEIS2O14770 477 aa21.17■□□□□ 0.98
SMIM4-205ENST00000491607 NBNO60934 754 aa21.17■□□□□ 0.98
SMIM4-205ENST00000491607 LGALS2P05162 132 aa21.17■□□□□ 0.98
SMIM4-205ENST00000491607 HIC1Q14526 733 aa21.17■□□□□ 0.98
SMIM4-205ENST00000491607 ZNF618Q5T7W0 954 aa21.17■□□□□ 0.98
SMIM4-205ENST00000491607 RNF20Q5VTR2 975 aa21.17■□□□□ 0.98
SMIM4-205ENST00000491607 PCNX4Q63HM2 1172 aa21.17■□□□□ 0.98
SMIM4-205ENST00000491607 CNKSR3Q6P9H4 555 aa21.17■□□□□ 0.98
SMIM4-205ENST00000491607 METTL7BQ6UX53 244 aa21.17■□□□□ 0.98
SMIM4-205ENST00000491607 MICALL1Q8N3F8 863 aa21.17■□□□□ 0.98
SMIM4-205ENST00000491607 SYMPKQ92797 1274 aaKnown RBP21.17■□□□□ 0.98
SMIM4-205ENST00000491607 WNT8BQ93098 351 aa21.17■□□□□ 0.98
SMIM4-205ENST00000491607 MYH7BA7E2Y1 1941 aa21.17■□□□□ 0.98
SMIM4-205ENST00000491607 hCG_1642624A0A1W2PR95 340 aa21.16■□□□□ 0.98
SMIM4-205ENST00000491607 C17orf102A2RUQ5 167 aa21.16■□□□□ 0.98
SMIM4-205ENST00000491607 TLL1O43897 1013 aa21.16■□□□□ 0.98
SMIM4-205ENST00000491607 WDR5P61964 334 aaKnown RBP21.16■□□□□ 0.98
SMIM4-205ENST00000491607 SP4Q02446 784 aa21.16■□□□□ 0.98
SMIM4-205ENST00000491607 SEMA3FQ13275 785 aa21.16■□□□□ 0.98
SMIM4-205ENST00000491607 MICU3Q86XE3 530 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 435.8 ms