RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 SP2Q02086 613 aa19.3■□□□□ 0.68
SRGAP3-209ENST00000490889 PGM5Q15124 567 aa19.3■□□□□ 0.68
SRGAP3-209ENST00000490889 TRIM71Q2Q1W2 868 aaKnown RBP19.3■□□□□ 0.68
SRGAP3-209ENST00000490889 HSDL1Q3SXM5 330 aa19.3■□□□□ 0.68
SRGAP3-209ENST00000490889 MYSM1Q5VVJ2 828 aa19.3■□□□□ 0.68
SRGAP3-209ENST00000490889 TRAF7Q6Q0C0 670 aa19.3■□□□□ 0.68
SRGAP3-209ENST00000490889 VSIG10LQ86VR7 867 aa19.3■□□□□ 0.68
SRGAP3-209ENST00000490889 DHX37Q8IY37 1157 aaKnown RBP19.3■□□□□ 0.68
SRGAP3-209ENST00000490889 CCDC155Q8N6L0 562 aa19.3■□□□□ 0.68
SRGAP3-209ENST00000490889 RIOX1Q9H6W3 641 aa19.3■□□□□ 0.68
SRGAP3-209ENST00000490889 LCHNA4D1U4 455 aa19.29■□□□□ 0.68
SRGAP3-209ENST00000490889 CXCL10P02778 98 aa19.29■□□□□ 0.68
SRGAP3-209ENST00000490889 POU3F3P20264 500 aaPredicted RBP19.29■□□□□ 0.68
SRGAP3-209ENST00000490889 CHMLP26374 656 aa19.29■□□□□ 0.68
SRGAP3-209ENST00000490889 DEFB103AP81534 67 aa19.29■□□□□ 0.68
SRGAP3-209ENST00000490889 TROAPQ12815 778 aa19.29■□□□□ 0.68
SRGAP3-209ENST00000490889 KIAA0753Q2KHM9 967 aa19.29■□□□□ 0.68
SRGAP3-209ENST00000490889 C7orf31Q8N865 590 aa19.29■□□□□ 0.68
SRGAP3-209ENST00000490889 ADAMTS19Q8TE59 1207 aa19.29■□□□□ 0.68
SRGAP3-209ENST00000490889 ARNTL2Q8WYA1 636 aa19.29■□□□□ 0.68
SRGAP3-209ENST00000490889 MAP3K20Q9NYL2 800 aaKnown RBP19.29■□□□□ 0.68
SRGAP3-209ENST00000490889 COL4A4P53420 1690 aaPredicted RBP19.29■□□□□ 0.68
SRGAP3-209ENST00000490889 IFIT3O14879 490 aaKnown RBP19.28■□□□□ 0.68
SRGAP3-209ENST00000490889 GGPS1O95749 300 aa19.28■□□□□ 0.68
SRGAP3-209ENST00000490889 UBA1P22314 1058 aaKnown RBP19.28■□□□□ 0.68
SRGAP3-209ENST00000490889 TFF2Q03403 129 aa19.28■□□□□ 0.68
SRGAP3-209ENST00000490889 TRDNQ13061 729 aa19.28■□□□□ 0.68
SRGAP3-209ENST00000490889 MBTPS1Q14703 1052 aa19.28■□□□□ 0.68
SRGAP3-209ENST00000490889 CELF3Q5SZQ8 465 aaKnown RBP19.28■□□□□ 0.68
SRGAP3-209ENST00000490889 KATNAL1Q9BW62 490 aa19.28■□□□□ 0.68
SRGAP3-209ENST00000490889 BCAS3Q9H6U6 928 aa19.28■□□□□ 0.68
SRGAP3-209ENST00000490889 NCOR1O75376 2440 aa19.27■□□□□ 0.68
SRGAP3-209ENST00000490889 E7EWF7 191 aa19.27■□□□□ 0.68
SRGAP3-209ENST00000490889 KCNJ6P48051 423 aa19.27■□□□□ 0.68
SRGAP3-209ENST00000490889 ANTXR2P58335 489 aa19.27■□□□□ 0.68
SRGAP3-209ENST00000490889 PTK7Q13308 1070 aa19.27■□□□□ 0.68
SRGAP3-209ENST00000490889 CNKSR3Q6P9H4 555 aa19.27■□□□□ 0.68
SRGAP3-209ENST00000490889 FCHSD1Q86WN1 690 aa19.27■□□□□ 0.68
SRGAP3-209ENST00000490889 SPATA33Q96N06 139 aa19.27■□□□□ 0.68
SRGAP3-209ENST00000490889 SUPT16HQ9Y5B9 1047 aaKnown RBP19.27■□□□□ 0.68
SRGAP3-209ENST00000490889 U3KPZ7 1027 aaPredicted RBP19.27■□□□□ 0.68
SRGAP3-209ENST00000490889 KIF28PB7ZC32 967 aa19.26■□□□□ 0.67
SRGAP3-209ENST00000490889 GCOM1H8Y6P7 765 aaPredicted RBP19.26■□□□□ 0.67
SRGAP3-209ENST00000490889 TLL1O43897 1013 aa19.26■□□□□ 0.67
SRGAP3-209ENST00000490889 LPXNO60711 386 aa19.26■□□□□ 0.67
SRGAP3-209ENST00000490889 PPFIA4O75335 1185 aa19.26■□□□□ 0.67
SRGAP3-209ENST00000490889 POLR2MP0CAP2 368 aa19.26■□□□□ 0.67
SRGAP3-209ENST00000490889 WTAPQ15007 396 aa19.26■□□□□ 0.67
SRGAP3-209ENST00000490889 ZNF618Q5T7W0 954 aa19.26■□□□□ 0.67
SRGAP3-209ENST00000490889 SAMD3Q8N6K7 520 aa19.26■□□□□ 0.67
SRGAP3-209ENST00000490889 NECAB3Q96P71 396 aaPredicted RBP19.26■□□□□ 0.67
SRGAP3-209ENST00000490889 UHRF1Q96T88 793 aaPredicted RBP19.26■□□□□ 0.67
SRGAP3-209ENST00000490889 C16orf70Q9BSU1 422 aa19.26■□□□□ 0.67
SRGAP3-209ENST00000490889 TCF20Q9UGU0 1960 aaKnown RBP19.25■□□□□ 0.67
SRGAP3-209ENST00000490889 SGSM2O43147 1006 aa19.25■□□□□ 0.67
SRGAP3-209ENST00000490889 BMP1P13497 986 aa19.25■□□□□ 0.67
SRGAP3-209ENST00000490889 CCND2P30279 289 aa19.25■□□□□ 0.67
SRGAP3-209ENST00000490889 MRPS9P82933 396 aaKnown RBP19.25■□□□□ 0.67
SRGAP3-209ENST00000490889 GRB10Q13322 594 aa19.25■□□□□ 0.67
SRGAP3-209ENST00000490889 KCNV1Q6PIU1 500 aa19.25■□□□□ 0.67
SRGAP3-209ENST00000490889 RUFY2Q8WXA3 655 aa19.25■□□□□ 0.67
SRGAP3-209ENST00000490889 PIBF1Q8WXW3 757 aa19.25■□□□□ 0.67
SRGAP3-209ENST00000490889 FRMPD4Q14CM0 1322 aa19.25■□□□□ 0.67
SRGAP3-209ENST00000490889 DOCK5Q9H7D0 1870 aa19.24■□□□□ 0.67
SRGAP3-209ENST00000490889 PNMA6FA0A0J9YX94 578 aa19.24■□□□□ 0.67
SRGAP3-209ENST00000490889 GTPBP6O43824 516 aaPredicted RBP19.24■□□□□ 0.67
SRGAP3-209ENST00000490889 PARNO95453 639 aaKnown RBP19.24■□□□□ 0.67
SRGAP3-209ENST00000490889 KCNQ1P51787 676 aa19.24■□□□□ 0.67
SRGAP3-209ENST00000490889 SEMA3FQ13275 785 aa19.24■□□□□ 0.67
SRGAP3-209ENST00000490889 SKIV2LQ15477 1246 aaKnown RBP19.24■□□□□ 0.67
SRGAP3-209ENST00000490889 RALYLQ86SE5 291 aaKnown RBP19.24■□□□□ 0.67
SRGAP3-209ENST00000490889 MB21D2Q8IYB1 491 aaPredicted RBP19.24■□□□□ 0.67
SRGAP3-209ENST00000490889 NCOA7Q8NI08 942 aa19.24■□□□□ 0.67
SRGAP3-209ENST00000490889 IGDCC4Q8TDY8 1250 aa19.24■□□□□ 0.67
SRGAP3-209ENST00000490889 TSPYL2Q9H2G4 693 aaPredicted RBP19.24■□□□□ 0.67
SRGAP3-209ENST00000490889 TELO2Q9Y4R8 837 aa19.24■□□□□ 0.67
SRGAP3-209ENST00000490889 ERICH2A1L162 156 aa19.23■□□□□ 0.67
SRGAP3-209ENST00000490889 TGFB3P10600 412 aa19.23■□□□□ 0.67
SRGAP3-209ENST00000490889 IRX6P78412 446 aaPredicted RBP19.23■□□□□ 0.67
SRGAP3-209ENST00000490889 COL9A3Q14050 684 aaPredicted RBP19.23■□□□□ 0.67
SRGAP3-209ENST00000490889 SERINC5Q86VE9 423 aa19.23■□□□□ 0.67
SRGAP3-209ENST00000490889 MYL10Q9BUA6 226 aa19.23■□□□□ 0.67
SRGAP3-209ENST00000490889 MLXIPQ9HAP2 919 aa19.23■□□□□ 0.67
SRGAP3-209ENST00000490889 ABHD14A-ACY1A0A1B0GW23 586 aa19.22■□□□□ 0.67
SRGAP3-209ENST00000490889 GJB5O95377 273 aa19.22■□□□□ 0.67
SRGAP3-209ENST00000490889 LGALS2P05162 132 aa19.22■□□□□ 0.67
SRGAP3-209ENST00000490889 HOXC8P31273 242 aa19.22■□□□□ 0.67
SRGAP3-209ENST00000490889 MKRN4PQ13434 485 aaPredicted RBP19.22■□□□□ 0.67
SRGAP3-209ENST00000490889 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.22■□□□□ 0.67
SRGAP3-209ENST00000490889 GDPD5Q8WTR4 605 aa19.22■□□□□ 0.67
SRGAP3-209ENST00000490889 MAP4K1Q92918 833 aa19.22■□□□□ 0.67
SRGAP3-209ENST00000490889 INPP4AQ96PE3 977 aaPredicted RBP19.22■□□□□ 0.67
SRGAP3-209ENST00000490889 ZBED2Q9BTP6 218 aa19.22■□□□□ 0.67
SRGAP3-209ENST00000490889 OSBPL7Q9BZF2 842 aa19.22■□□□□ 0.67
SRGAP3-209ENST00000490889 H3BRB1 525 aa19.21■□□□□ 0.67
SRGAP3-209ENST00000490889 LGR5O75473 907 aa19.21■□□□□ 0.67
SRGAP3-209ENST00000490889 THPOP40225 353 aa19.21■□□□□ 0.67
SRGAP3-209ENST00000490889 TRAF1Q13077 416 aa19.21■□□□□ 0.67
SRGAP3-209ENST00000490889 SART3Q15020 963 aaKnown RBP19.21■□□□□ 0.67
SRGAP3-209ENST00000490889 FAM117BQ6P1L5 589 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms