RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 DHX38Q92620 1227 aaKnown RBP23.39■■□□□ 1.33
TRIM8-204ENST00000487927 SNX21Q969T3 373 aa23.39■■□□□ 1.33
TRIM8-204ENST00000487927 NKX2-4Q9H2Z4 354 aa23.39■■□□□ 1.33
TRIM8-204ENST00000487927 MSRAQ9UJ68 235 aa23.39■■□□□ 1.33
TRIM8-204ENST00000487927 NOD1Q9Y239 953 aa23.39■■□□□ 1.33
TRIM8-204ENST00000487927 SLC4A7Q9Y6M7 1214 aa23.39■■□□□ 1.33
TRIM8-204ENST00000487927 PTPRSQ13332 1948 aa23.39■■□□□ 1.33
TRIM8-204ENST00000487927 ZBBXA8MT70 800 aa23.38■■□□□ 1.33
TRIM8-204ENST00000487927 HAS3O00219 553 aa23.38■■□□□ 1.33
TRIM8-204ENST00000487927 SORBS3O60504 671 aa23.38■■□□□ 1.33
TRIM8-204ENST00000487927 F2P00734 622 aa23.38■■□□□ 1.33
TRIM8-204ENST00000487927 ZNF286BP0CG31 522 aa23.38■■□□□ 1.33
TRIM8-204ENST00000487927 UBA1P22314 1058 aaKnown RBP23.38■■□□□ 1.33
TRIM8-204ENST00000487927 CCND2P30279 289 aa23.38■■□□□ 1.33
TRIM8-204ENST00000487927 MCM5P33992 734 aa23.38■■□□□ 1.33
TRIM8-204ENST00000487927 RFC2P35250 354 aa23.38■■□□□ 1.33
TRIM8-204ENST00000487927 PSEN2P49810 448 aa23.38■■□□□ 1.33
TRIM8-204ENST00000487927 RABGGTBP53611 331 aa23.38■■□□□ 1.33
TRIM8-204ENST00000487927 ANAPC15P60006 121 aa23.38■■□□□ 1.33
TRIM8-204ENST00000487927 BFSP2Q13515 415 aa23.38■■□□□ 1.33
TRIM8-204ENST00000487927 HSDL1Q3SXM5 330 aa23.38■■□□□ 1.33
TRIM8-204ENST00000487927 CELF3Q5SZQ8 465 aaKnown RBP23.38■■□□□ 1.33
TRIM8-204ENST00000487927 KCNV1Q6PIU1 500 aa23.38■■□□□ 1.33
TRIM8-204ENST00000487927 RETREG2Q8NC44 543 aa23.38■■□□□ 1.33
TRIM8-204ENST00000487927 HDAC6Q9UBN7 1215 aa23.38■■□□□ 1.33
TRIM8-204ENST00000487927 GTF2IRD1Q9UHL9 959 aa23.38■■□□□ 1.33
TRIM8-204ENST00000487927 PLEKHA8P1O95397 391 aa23.37■■□□□ 1.33
TRIM8-204ENST00000487927 GGPS1O95749 300 aa23.37■■□□□ 1.33
TRIM8-204ENST00000487927 SMARCA1P28370 1054 aa23.37■■□□□ 1.33
TRIM8-204ENST00000487927 KIF5BP33176 963 aa23.37■■□□□ 1.33
TRIM8-204ENST00000487927 MRPS9P82933 396 aaKnown RBP23.37■■□□□ 1.33
TRIM8-204ENST00000487927 MFSD10Q14728 455 aa23.37■■□□□ 1.33
TRIM8-204ENST00000487927 RABEP1Q15276 862 aa23.37■■□□□ 1.33
TRIM8-204ENST00000487927 TMEM87BQ96K49 555 aa23.37■■□□□ 1.33
TRIM8-204ENST00000487927 ALG1Q9BT22 464 aa23.37■■□□□ 1.33
TRIM8-204ENST00000487927 PRDM12Q9H4Q4 367 aa23.37■■□□□ 1.33
TRIM8-204ENST00000487927 ANO2Q9NQ90 1003 aa23.37■■□□□ 1.33
TRIM8-204ENST00000487927 CHD7Q9P2D1 2997 aa23.36■■□□□ 1.33
TRIM8-204ENST00000487927 MYOGP15173 224 aa23.36■■□□□ 1.33
TRIM8-204ENST00000487927 RXRAP19793 462 aa23.36■■□□□ 1.33
TRIM8-204ENST00000487927 GPNMBQ14956 572 aa23.36■■□□□ 1.33
TRIM8-204ENST00000487927 SRBD1Q8N5C6 995 aaKnown RBP23.36■■□□□ 1.33
TRIM8-204ENST00000487927 CAGE1Q8TC20 777 aa23.36■■□□□ 1.33
TRIM8-204ENST00000487927 RRP36Q96EU6 259 aaKnown RBP23.36■■□□□ 1.33
TRIM8-204ENST00000487927 IL17RAQ96F46 866 aa23.36■■□□□ 1.33
TRIM8-204ENST00000487927 SPATA33Q96N06 139 aa23.36■■□□□ 1.33
TRIM8-204ENST00000487927 KATNAL1Q9BW62 490 aa23.36■■□□□ 1.33
TRIM8-204ENST00000487927 BCAS3Q9H6U6 928 aa23.36■■□□□ 1.33
TRIM8-204ENST00000487927 PPFIA4O75335 1185 aa23.35■■□□□ 1.33
TRIM8-204ENST00000487927 TGFB3P10600 412 aa23.35■■□□□ 1.33
TRIM8-204ENST00000487927 ATP2A2P16615 1042 aaKnown RBP23.35■■□□□ 1.33
TRIM8-204ENST00000487927 LIFRP42702 1097 aa23.35■■□□□ 1.33
TRIM8-204ENST00000487927 RBL2Q08999 1139 aa23.35■■□□□ 1.33
TRIM8-204ENST00000487927 KIAA0753Q2KHM9 967 aa23.35■■□□□ 1.33
TRIM8-204ENST00000487927 NFXL1Q6ZNB6 911 aa23.35■■□□□ 1.33
TRIM8-204ENST00000487927 CMTR1Q8N1G2 835 aaKnown RBP23.35■■□□□ 1.33
TRIM8-204ENST00000487927 TMTC2Q8N394 836 aa23.35■■□□□ 1.33
TRIM8-204ENST00000487927 C7orf31Q8N865 590 aa23.35■■□□□ 1.33
TRIM8-204ENST00000487927 USP38Q8NB14 1042 aa23.35■■□□□ 1.33
TRIM8-204ENST00000487927 COL25A1Q9BXS0 654 aaPredicted RBP23.35■■□□□ 1.33
TRIM8-204ENST00000487927 LRRC2Q9BYS8 371 aa23.35■■□□□ 1.33
TRIM8-204ENST00000487927 CCDC69A6NI79 296 aa23.34■■□□□ 1.33
TRIM8-204ENST00000487927 MEIS2O14770 477 aa23.34■■□□□ 1.33
TRIM8-204ENST00000487927 SEMA3FQ13275 785 aa23.34■■□□□ 1.33
TRIM8-204ENST00000487927 HIC1Q14526 733 aa23.34■■□□□ 1.33
TRIM8-204ENST00000487927 USP17L6PQ6QN14 398 aa23.34■■□□□ 1.33
TRIM8-204ENST00000487927 RAB11FIP4Q86YS3 637 aa23.34■■□□□ 1.33
TRIM8-204ENST00000487927 CCDC155Q8N6L0 562 aa23.34■■□□□ 1.33
TRIM8-204ENST00000487927 AFAP1L1Q8TED9 768 aa23.34■■□□□ 1.33
TRIM8-204ENST00000487927 INPP4AQ96PE3 977 aaPredicted RBP23.34■■□□□ 1.33
TRIM8-204ENST00000487927 LZTS2Q9BRK4 669 aa23.34■■□□□ 1.33
TRIM8-204ENST00000487927 C16orf70Q9BSU1 422 aa23.34■■□□□ 1.33
TRIM8-204ENST00000487927 SLC28A3Q9HAS3 691 aa23.34■■□□□ 1.33
TRIM8-204ENST00000487927 PCDHA11Q9Y5I1 949 aa23.34■■□□□ 1.33
TRIM8-204ENST00000487927 ACTN1P12814 892 aa23.33■■□□□ 1.33
TRIM8-204ENST00000487927 ICAM3P32942 547 aa23.33■■□□□ 1.33
TRIM8-204ENST00000487927 ADGRE1Q14246 886 aa23.33■■□□□ 1.33
TRIM8-204ENST00000487927 HSCBQ8IWL3 235 aa23.33■■□□□ 1.33
TRIM8-204ENST00000487927 WNT8BQ93098 351 aa23.33■■□□□ 1.33
TRIM8-204ENST00000487927 GAS2L1Q99501 681 aaPredicted RBP23.33■■□□□ 1.33
TRIM8-204ENST00000487927 RBAK-RBAKDNI3L0D1 243 aa23.32■■□□□ 1.32
TRIM8-204ENST00000487927 PIK3CDO00329 1044 aa23.32■■□□□ 1.32
TRIM8-204ENST00000487927 SELPP16109 830 aa23.32■■□□□ 1.32
TRIM8-204ENST00000487927 GNAQP50148 359 aa23.32■■□□□ 1.32
TRIM8-204ENST00000487927 ZNF200P98182 395 aaPredicted RBP23.32■■□□□ 1.32
TRIM8-204ENST00000487927 TRIM71Q2Q1W2 868 aaKnown RBP23.32■■□□□ 1.32
TRIM8-204ENST00000487927 KIF2CQ99661 725 aa23.32■■□□□ 1.32
TRIM8-204ENST00000487927 FTOQ9C0B1 505 aaKnown RBP eCLIP23.32■■□□□ 1.32
TRIM8-204ENST00000487927 MLXIPQ9HAP2 919 aa23.32■■□□□ 1.32
TRIM8-204ENST00000487927 RTEL1Q9NZ71 1219 aa23.32■■□□□ 1.32
TRIM8-204ENST00000487927 SEC63Q9UGP8 760 aaKnown RBP23.32■■□□□ 1.32
TRIM8-204ENST00000487927 SPATA31C2B4DYI2 1134 aa23.31■■□□□ 1.32
TRIM8-204ENST00000487927 STAM2O75886 525 aa23.31■■□□□ 1.32
TRIM8-204ENST00000487927 CALM1P0DP23 149 aa23.31■■□□□ 1.32
TRIM8-204ENST00000487927 CALM2P0DP24 149 aa23.31■■□□□ 1.32
TRIM8-204ENST00000487927 CALM3P0DP25 149 aa23.31■■□□□ 1.32
TRIM8-204ENST00000487927 CKBP12277 381 aa23.31■■□□□ 1.32
TRIM8-204ENST00000487927 PTK7Q13308 1070 aa23.31■■□□□ 1.32
TRIM8-204ENST00000487927 TRAF7Q6Q0C0 670 aa23.31■■□□□ 1.32
TRIM8-204ENST00000487927 LRRC8DQ7L1W4 858 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms