RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 LETM1O95202 739 aaPredicted RBP15.8■□□□□ 0.12
SMAD9-204ENST00000483941 BAATQ14032 418 aaPredicted RBP15.8■□□□□ 0.12
SMAD9-204ENST00000483941 KCTD2Q14681 263 aa15.8■□□□□ 0.12
SMAD9-204ENST00000483941 PWP2Q15269 919 aaKnown RBP15.8■□□□□ 0.12
SMAD9-204ENST00000483941 ARHGEF16Q5VV41 709 aa15.8■□□□□ 0.12
SMAD9-204ENST00000483941 NIPA1Q7RTP0 329 aa15.8■□□□□ 0.12
SMAD9-204ENST00000483941 PXYLP1Q8TE99 480 aa15.8■□□□□ 0.12
SMAD9-204ENST00000483941 CRYGNQ8WXF5 182 aa15.8■□□□□ 0.12
SMAD9-204ENST00000483941 PGBD1Q96JS3 809 aa15.8■□□□□ 0.12
SMAD9-204ENST00000483941 FAM20AQ96MK3 541 aa15.8■□□□□ 0.12
SMAD9-204ENST00000483941 MBOAT7Q96N66 472 aa15.8■□□□□ 0.12
SMAD9-204ENST00000483941 IWS1Q96ST2 819 aa15.8■□□□□ 0.12
SMAD9-204ENST00000483941 RMDN3Q96TC7 470 aa15.8■□□□□ 0.12
SMAD9-204ENST00000483941 PAK6Q9NQU5 681 aaPredicted RBP15.8■□□□□ 0.12
SMAD9-204ENST00000483941 CYP39A1Q9NYL5 469 aa15.8■□□□□ 0.12
SMAD9-204ENST00000483941 FBXO2Q9UK22 296 aaPredicted RBP15.8■□□□□ 0.12
SMAD9-204ENST00000483941 RPTORQ8N122 1335 aa15.79■□□□□ 0.12
SMAD9-204ENST00000483941 RLFQ13129 1914 aa15.79■□□□□ 0.12
SMAD9-204ENST00000483941 MYH15Q9Y2K3 1946 aa15.79■□□□□ 0.12
SMAD9-204ENST00000483941 TNPO2O14787 897 aaKnown RBP15.79■□□□□ 0.12
SMAD9-204ENST00000483941 CNMDO75829 334 aa15.79■□□□□ 0.12
SMAD9-204ENST00000483941 FCER1AP12319 257 aa15.79■□□□□ 0.12
SMAD9-204ENST00000483941 ERCC3P19447 782 aa15.79■□□□□ 0.12
SMAD9-204ENST00000483941 IRF5Q13568 498 aa15.79■□□□□ 0.12
SMAD9-204ENST00000483941 FAM110CQ1W6H9 321 aa15.79■□□□□ 0.12
SMAD9-204ENST00000483941 AXDND1Q5T1B0 1012 aaPredicted RBP15.79■□□□□ 0.12
SMAD9-204ENST00000483941 PCNX4Q63HM2 1172 aa15.79■□□□□ 0.12
SMAD9-204ENST00000483941 ABRAQ8N0Z2 381 aa15.79■□□□□ 0.12
SMAD9-204ENST00000483941 DEFB123Q8N688 67 aa15.79■□□□□ 0.12
SMAD9-204ENST00000483941 FSIP1Q8NA03 581 aa15.79■□□□□ 0.12
SMAD9-204ENST00000483941 TBC1D5Q92609 795 aa15.79■□□□□ 0.12
SMAD9-204ENST00000483941 PAWRQ96IZ0 340 aaKnown RBP15.79■□□□□ 0.12
SMAD9-204ENST00000483941 GDF15Q99988 308 aa15.79■□□□□ 0.12
SMAD9-204ENST00000483941 CRISPLD2Q9H0B8 497 aa15.79■□□□□ 0.12
SMAD9-204ENST00000483941 DDX19AQ9NUU7 478 aaKnown RBP15.79■□□□□ 0.12
SMAD9-204ENST00000483941 DNAH12Q6ZR08 3092 aa15.79■□□□□ 0.12
SMAD9-204ENST00000483941 PARP14Q460N5 1801 aa15.78■□□□□ 0.12
SMAD9-204ENST00000483941 FRMPD4Q14CM0 1322 aa15.78■□□□□ 0.12
SMAD9-204ENST00000483941 POTEB2H3BUK9 544 aa15.78■□□□□ 0.12
SMAD9-204ENST00000483941 MAFGO15525 162 aa15.78■□□□□ 0.12
SMAD9-204ENST00000483941 SLC26A4O43511 780 aa15.78■□□□□ 0.12
SMAD9-204ENST00000483941 GADD45BO75293 160 aaPredicted RBP15.78■□□□□ 0.12
SMAD9-204ENST00000483941 CCND2P30279 289 aa15.78■□□□□ 0.12
SMAD9-204ENST00000483941 MAPK4P31152 587 aa15.78■□□□□ 0.12
SMAD9-204ENST00000483941 BMP8BP34820 402 aa15.78■□□□□ 0.12
SMAD9-204ENST00000483941 FAM160A1Q05DH4 1040 aa15.78■□□□□ 0.12
SMAD9-204ENST00000483941 PDIA5Q14554 519 aa15.78■□□□□ 0.12
SMAD9-204ENST00000483941 CEP55Q53EZ4 464 aa15.78■□□□□ 0.12
SMAD9-204ENST00000483941 NECAB2Q7Z6G3 386 aa15.78■□□□□ 0.12
SMAD9-204ENST00000483941 C7orf61Q8IZ16 206 aa15.78■□□□□ 0.12
SMAD9-204ENST00000483941 C4orf32Q8N8J7 132 aa15.78■□□□□ 0.12
SMAD9-204ENST00000483941 CDHR1Q96JP9 859 aa15.78■□□□□ 0.12
SMAD9-204ENST00000483941 A1CFQ9NQ94 594 aaKnown RBP15.78■□□□□ 0.12
SMAD9-204ENST00000483941 PXMP2Q9NR77 195 aa15.78■□□□□ 0.12
SMAD9-204ENST00000483941 HOOK1Q9UJC3 728 aaKnown RBP15.78■□□□□ 0.12
SMAD9-204ENST00000483941 IVNS1ABPQ9Y6Y0 642 aa15.78■□□□□ 0.12
SMAD9-204ENST00000483941 TCHHQ07283 1943 aa15.78■□□□□ 0.12
SMAD9-204ENST00000483941 FAM237AA0A1B0GTK4 181 aa15.77■□□□□ 0.12
SMAD9-204ENST00000483941 VWA3AA6NCI4 1184 aa15.77■□□□□ 0.12
SMAD9-204ENST00000483941 KINO60870 393 aaKnown RBP15.77■□□□□ 0.12
SMAD9-204ENST00000483941 TAL1P17542 331 aaPredicted RBP15.77■□□□□ 0.12
SMAD9-204ENST00000483941 FXR2P51116 673 aaKnown RBP eCLIP15.77■□□□□ 0.12
SMAD9-204ENST00000483941 PRR16Q569H4 304 aa15.77■□□□□ 0.12
SMAD9-204ENST00000483941 RESP18Q5W5W9 173 aa15.77■□□□□ 0.12
SMAD9-204ENST00000483941 Q7L0L9 218 aa15.77■□□□□ 0.12
SMAD9-204ENST00000483941 NLRX1Q86UT6 975 aa15.77■□□□□ 0.12
SMAD9-204ENST00000483941 ANKRD13CQ8N6S4 541 aa15.77■□□□□ 0.12
SMAD9-204ENST00000483941 GPT2Q8TD30 523 aa15.77■□□□□ 0.12
SMAD9-204ENST00000483941 DIS3LQ8TF46 1054 aaKnown RBP15.77■□□□□ 0.12
SMAD9-204ENST00000483941 MTMR9Q96QG7 549 aa15.77■□□□□ 0.12
SMAD9-204ENST00000483941 MMP19Q99542 508 aa15.77■□□□□ 0.12
SMAD9-204ENST00000483941 TXNRD2Q9NNW7 524 aa15.77■□□□□ 0.12
SMAD9-204ENST00000483941 SLC5A4Q9NY91 659 aa15.77■□□□□ 0.12
SMAD9-204ENST00000483941 USP25Q9UHP3 1055 aa15.77■□□□□ 0.12
SMAD9-204ENST00000483941 STXBP5LQ9Y2K9 1186 aa15.77■□□□□ 0.12
SMAD9-204ENST00000483941 CTAGE5O15320 804 aa15.76■□□□□ 0.11
SMAD9-204ENST00000483941 TDP2O95551 362 aa15.76■□□□□ 0.11
SMAD9-204ENST00000483941 UBA7P41226 1012 aa15.76■□□□□ 0.11
SMAD9-204ENST00000483941 GNPTABQ3T906 1256 aa15.76■□□□□ 0.11
SMAD9-204ENST00000483941 CCDC183Q5T5S1 534 aa15.76■□□□□ 0.11
SMAD9-204ENST00000483941 WDR78Q5VTH9 848 aa15.76■□□□□ 0.11
SMAD9-204ENST00000483941 KANK3Q6NY19 840 aa15.76■□□□□ 0.11
SMAD9-204ENST00000483941 SLC30A10Q6XR72 485 aa15.76■□□□□ 0.11
SMAD9-204ENST00000483941 TAAR1Q96RJ0 339 aa15.76■□□□□ 0.11
SMAD9-204ENST00000483941 MXRA8Q9BRK3 442 aa15.76■□□□□ 0.11
SMAD9-204ENST00000483941 PDCD2LQ9BRP1 358 aa15.76■□□□□ 0.11
SMAD9-204ENST00000483941 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.76■□□□□ 0.11
SMAD9-204ENST00000483941 CSRNP2Q9H175 543 aa15.76■□□□□ 0.11
SMAD9-204ENST00000483941 CCDC39Q9UFE4 941 aa15.76■□□□□ 0.11
SMAD9-204ENST00000483941 ZMYND8Q9ULU4 1186 aaPredicted RBP15.76■□□□□ 0.11
SMAD9-204ENST00000483941 PCDHA12Q9UN75 941 aa15.76■□□□□ 0.11
SMAD9-204ENST00000483941 A0A0G2JMZ2 1700 aa15.76■□□□□ 0.11
SMAD9-204ENST00000483941 SPTBN5Q9NRC6 3674 aaKnown RBP15.76■□□□□ 0.11
SMAD9-204ENST00000483941 MEIS1O00470 390 aa15.75■□□□□ 0.11
SMAD9-204ENST00000483941 TXKP42681 527 aa15.75■□□□□ 0.11
SMAD9-204ENST00000483941 SYKP43405 635 aa15.75■□□□□ 0.11
SMAD9-204ENST00000483941 PGM5Q15124 567 aa15.75■□□□□ 0.11
SMAD9-204ENST00000483941 STXBP2Q15833 593 aa15.75■□□□□ 0.11
SMAD9-204ENST00000483941 Q3C1V9 767 aa15.75■□□□□ 0.11
SMAD9-204ENST00000483941 POTEEQ6S8J3 1075 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms