RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 MRFAP1Q9Y605 127 aa12.09□□□□□ -0.47
EWSR1-217ENST00000483415 A0A087WUV0 522 aaPredicted RBP12.08□□□□□ -0.48
EWSR1-217ENST00000483415 A0A087WWV3 80 aa12.08□□□□□ -0.48
EWSR1-217ENST00000483415 RASSF10A6NK89 507 aa12.08□□□□□ -0.48
EWSR1-217ENST00000483415 VWA5AO00534 786 aa12.08□□□□□ -0.48
EWSR1-217ENST00000483415 SREBF2Q12772 1141 aa12.08□□□□□ -0.48
EWSR1-217ENST00000483415 BEND6Q5SZJ8 279 aaPredicted RBP12.08□□□□□ -0.48
EWSR1-217ENST00000483415 RGMBQ6NW40 437 aa12.08□□□□□ -0.48
EWSR1-217ENST00000483415 ELOA2Q8IYF1 753 aaPredicted RBP12.08□□□□□ -0.48
EWSR1-217ENST00000483415 CRYGNQ8WXF5 182 aa12.08□□□□□ -0.48
EWSR1-217ENST00000483415 RCOR1Q9UKL0 485 aa12.08□□□□□ -0.48
EWSR1-217ENST00000483415 PFASO15067 1338 aa12.08□□□□□ -0.48
EWSR1-217ENST00000483415 FRMPD2Q68DX3 1309 aaPredicted RBP12.08□□□□□ -0.48
EWSR1-217ENST00000483415 FAM237AA0A1B0GTK4 181 aa12.08□□□□□ -0.48
EWSR1-217ENST00000483415 TMEM88BA6NKF7 163 aa12.08□□□□□ -0.48
EWSR1-217ENST00000483415 N4BP1O75113 896 aaKnown RBP12.08□□□□□ -0.48
EWSR1-217ENST00000483415 RXRAP19793 462 aa12.08□□□□□ -0.48
EWSR1-217ENST00000483415 MYSM1Q5VVJ2 828 aa12.08□□□□□ -0.48
EWSR1-217ENST00000483415 ARL6IP4Q66PJ3 421 aaKnown RBP12.08□□□□□ -0.48
EWSR1-217ENST00000483415 PPP4R3AQ6IN85 833 aa12.08□□□□□ -0.48
EWSR1-217ENST00000483415 ZNF579Q8NAF0 562 aaKnown RBP12.08□□□□□ -0.48
EWSR1-217ENST00000483415 ANKRD20A12PQ8NF67 263 aa12.08□□□□□ -0.48
EWSR1-217ENST00000483415 GPCPD1Q9NPB8 672 aa12.08□□□□□ -0.48
EWSR1-217ENST00000483415 CREBZFQ9NS37 354 aa12.08□□□□□ -0.48
EWSR1-217ENST00000483415 VWA3AA6NCI4 1184 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 CTAGE5O15320 804 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 CIITAP33076 1130 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 TM4SF4P48230 202 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 BRD3Q15059 726 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 SHROOM1Q2M3G4 852 aaPredicted RBP12.07□□□□□ -0.48
EWSR1-217ENST00000483415 KCTD1Q719H9 257 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 SAPCD2Q86UD0 394 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 HOMER1Q86YM7 354 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 DIS3L2Q8IYB7 885 aaKnown RBP12.07□□□□□ -0.48
EWSR1-217ENST00000483415 AOPEPQ8N6M6 819 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 ELP3Q9H9T3 547 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 ZNFX1Q9P2E3 1918 aaKnown RBP12.07□□□□□ -0.48
EWSR1-217ENST00000483415 SPDYE16A6NNV3 312 aaPredicted RBP12.07□□□□□ -0.48
EWSR1-217ENST00000483415 TBX3O15119 743 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 CCP110O43303 1012 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 ALDH1A1P00352 501 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 SFPQP23246 707 aaKnown RBP eCLIP12.07□□□□□ -0.48
EWSR1-217ENST00000483415 NAPAP54920 295 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 NLRP5P59047 1200 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 JAKMIP3Q5VZ66 844 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 KCNV1Q6PIU1 500 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 CLEC10AQ8IUN9 316 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 JMYQ8N9B5 988 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 KCNG4Q8TDN1 519 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 XPO4Q9C0E2 1151 aaKnown RBP12.07□□□□□ -0.48
EWSR1-217ENST00000483415 BECN2A8MW95 431 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 PPP1R11O60927 126 aaPredicted RBP12.07□□□□□ -0.48
EWSR1-217ENST00000483415 POTEIP0CG38 1075 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 POTEJP0CG39 1038 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 TXLNAP40222 546 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 ATP2B2Q01814 1243 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 TTBK2Q6IQ55 1244 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 SHISA4Q96DD7 197 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 DDX11Q96FC9 970 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 PYM1Q9BRP8 204 aaKnown RBP12.07□□□□□ -0.48
EWSR1-217ENST00000483415 GOLPH3LQ9H4A5 285 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 MROH8Q9H579 483 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 PCDHA6Q9UN73 950 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 FAN1Q9Y2M0 1017 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 PCDHA8Q9Y5H6 950 aa12.07□□□□□ -0.48
EWSR1-217ENST00000483415 PPP2R3AQ06190 1150 aa12.06□□□□□ -0.48
EWSR1-217ENST00000483415 TMC6Q7Z403 805 aa12.06□□□□□ -0.48
EWSR1-217ENST00000483415 KIFC2Q96AC6 838 aa12.06□□□□□ -0.48
EWSR1-217ENST00000483415 PARK7Q99497 189 aaKnown RBP12.06□□□□□ -0.48
EWSR1-217ENST00000483415 TEX13BQ9BXU2 312 aa12.06□□□□□ -0.48
EWSR1-217ENST00000483415 A0A1W2PQ27 194 aa12.06□□□□□ -0.48
EWSR1-217ENST00000483415 A0A1W2PQ64 194 aa12.06□□□□□ -0.48
EWSR1-217ENST00000483415 A0A1W2PQD8 194 aa12.06□□□□□ -0.48
EWSR1-217ENST00000483415 SMCO2A6NFE2 343 aa12.06□□□□□ -0.48
EWSR1-217ENST00000483415 PPFIA4O75335 1185 aa12.06□□□□□ -0.48
EWSR1-217ENST00000483415 GJA5P36382 358 aa12.06□□□□□ -0.48
EWSR1-217ENST00000483415 HMGCS2P54868 508 aa12.06□□□□□ -0.48
EWSR1-217ENST00000483415 TTLL12Q14166 644 aaPredicted RBP12.06□□□□□ -0.48
EWSR1-217ENST00000483415 NONOQ15233 471 aaKnown RBP eCLIP12.06□□□□□ -0.486e-6■■■■□ 21
EWSR1-217ENST00000483415 OTUD7BQ6GQQ9 843 aa12.06□□□□□ -0.48
EWSR1-217ENST00000483415 REXO1Q8N1G1 1221 aaKnown RBP12.06□□□□□ -0.48
EWSR1-217ENST00000483415 ENGASEQ8NFI3 743 aa12.06□□□□□ -0.48
EWSR1-217ENST00000483415 ANO10Q9NW15 660 aa12.06□□□□□ -0.48
EWSR1-217ENST00000483415 SREBF1P36956 1147 aa12.05□□□□□ -0.48
EWSR1-217ENST00000483415 DHX8Q14562 1220 aaKnown RBP12.05□□□□□ -0.48
EWSR1-217ENST00000483415 DNERQ8NFT8 737 aa12.05□□□□□ -0.48
EWSR1-217ENST00000483415 RAB21Q9UL25 225 aa12.05□□□□□ -0.48
EWSR1-217ENST00000483415 ZNF214Q9UL59 606 aaPredicted RBP12.05□□□□□ -0.48
EWSR1-217ENST00000483415 PCDHA1Q9Y5I3 950 aa12.05□□□□□ -0.48
EWSR1-217ENST00000483415 FAM155AB1AL88 458 aaPredicted RBP12.05□□□□□ -0.48
EWSR1-217ENST00000483415 GOLGA8HP0CJ92 632 aa12.05□□□□□ -0.48
EWSR1-217ENST00000483415 SLURP2P0DP57 97 aa12.05□□□□□ -0.48
EWSR1-217ENST00000483415 BCRP11274 1271 aa12.05□□□□□ -0.48
EWSR1-217ENST00000483415 SEMA3FQ13275 785 aa12.05□□□□□ -0.48
EWSR1-217ENST00000483415 HEATR3Q7Z4Q2 680 aa12.05□□□□□ -0.48
EWSR1-217ENST00000483415 ZNF467Q7Z7K2 595 aaPredicted RBP12.05□□□□□ -0.48
EWSR1-217ENST00000483415 FERMT2Q96AC1 680 aa12.05□□□□□ -0.48
EWSR1-217ENST00000483415 WDR24Q96S15 920 aa12.05□□□□□ -0.48
EWSR1-217ENST00000483415 ANKZF1Q9H8Y5 726 aa12.05□□□□□ -0.48
EWSR1-217ENST00000483415 L1RE1Q9UN81 338 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms