RNA–Protein interactions for RNA: ENST00000483326.1

LTN1-205, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 1,753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-205ENST00000483326 PCDHA4Q9UN74 947 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 APOBEC2Q9Y235 224 aaKnown RBP4.89□□□□□ -1.63
LTN1-205ENST00000483326 ANKRD6Q9Y2G4 727 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 POLR3KQ9Y2Y1 108 aaPredicted RBP4.89□□□□□ -1.63
LTN1-205ENST00000483326 KNSTRNQ9Y448 316 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 CEP162Q5TB80 1403 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 PBRM1Q86U86 1689 aa4.89□□□□□ -1.63
LTN1-205ENST00000483326 FHAD1B1AJZ9 1412 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 TULP2O00295 520 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 APAF1O14727 1248 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 PIP5K1CO60331 668 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 RNASEH2AO75792 299 aaKnown RBP4.88□□□□□ -1.63
LTN1-205ENST00000483326 SNUPNO95149 360 aaKnown RBP4.88□□□□□ -1.63
LTN1-205ENST00000483326 PGRP06401 933 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 NAT2P11245 290 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 SERPINB3P29508 390 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 CYP2C19P33261 490 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 DDIT3P35638 169 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 GEMIN4P57678 1058 aaKnown RBP4.88□□□□□ -1.63
LTN1-205ENST00000483326 GTF2H3Q13889 308 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 PCBP1Q15365 356 aaKnown RBP eCLIP4.88□□□□□ -1.63
LTN1-205ENST00000483326 RASIP1Q5U651 963 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 CYB5RLQ6IPT4 315 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 UNC5AQ6ZN44 842 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 NBPF5PQ86XG9 351 aaPredicted RBP4.88□□□□□ -1.63
LTN1-205ENST00000483326 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.88□□□□□ -1.634e-6■■□□□ 11.7
LTN1-205ENST00000483326 TOP6BLQ8N6T0 577 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 FAM181AQ8N9Y4 354 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 COG1Q8WTW3 980 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 ATXN2LQ8WWM7 1075 aaKnown RBP4.88□□□□□ -1.63
LTN1-205ENST00000483326 CLIP3Q96DZ5 547 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 AARSD1Q9BTE6 412 aaKnown RBP4.88□□□□□ -1.63
LTN1-205ENST00000483326 SLC13A1Q9BZW2 595 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 ANTXR1Q9H6X2 564 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 TRIM39Q9HCM9 518 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 NLRC4Q9NPP4 1024 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 NUDCQ9Y266 331 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 SH3BP1Q9Y3L3 701 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 ERICH3Q5RHP9 1530 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 ABCA5Q8WWZ7 1642 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 A0A1W2PQU0 124 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 FANCGO15287 622 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 GRIN3BO60391 1043 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 LEFTY1O75610 366 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 ASLP04424 464 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 ZNF853P0CG23 659 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 BPIP17213 487 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 FLT3P36888 993 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 ZNF143P52747 638 aaPredicted RBP4.88□□□□□ -1.63
LTN1-205ENST00000483326 SLC7A5Q01650 507 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 BNIP3Q12983 259 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 CHAF1AQ13111 956 aaPredicted RBP4.88□□□□□ -1.63
LTN1-205ENST00000483326 STK3Q13188 491 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 BIRC3Q13489 604 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 PUM3Q15397 648 aaKnown RBP4.88□□□□□ -1.63
LTN1-205ENST00000483326 SEPT7Q16181 437 aaKnown RBP4.88□□□□□ -1.63
LTN1-205ENST00000483326 SLC4A8Q2Y0W8 1093 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 HYIQ5T013 277 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 C1orf228Q6PIY5 440 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 ZNF574Q6ZN55 896 aaPredicted RBP4.88□□□□□ -1.63
LTN1-205ENST00000483326 MMS22LQ6ZRQ5 1243 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 CDC37L1Q7L3B6 337 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 SPRED2Q7Z698 418 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 NGEFQ8N5V2 710 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 OTUD6BQ8N6M0 293 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 KCT2Q8NC54 265 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 CXorf38Q8TB03 319 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 ENOX1Q8TC92 643 aaKnown RBP4.88□□□□□ -1.63
LTN1-205ENST00000483326 SKA1Q96BD8 255 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 MPP4Q96JB8 637 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 HRASLS5Q96KN8 279 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 TNIP3Q96KP6 325 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 GPR101Q96P66 508 aaPredicted RBP4.88□□□□□ -1.63
LTN1-205ENST00000483326 PPP1R9BQ96SB3 815 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 KLHL11Q9NVR0 708 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 OGFRQ9NZT2 677 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 GTF2IRD1Q9UHL9 959 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 PHTF1Q9UMS5 762 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 IPPQ9Y573 584 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 SNX11Q9Y5W9 270 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 CSADQ9Y600 493 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 RIMBP3CA6NJZ7 1639 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 RIMBP3BA6NNM3 1639 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 RIMBP3Q9UFD9 1639 aa4.88□□□□□ -1.63
LTN1-205ENST00000483326 LTBP3Q9NS15 1303 aa4.87□□□□□ -1.63
LTN1-205ENST00000483326 KIF27Q86VH2 1401 aa4.87□□□□□ -1.63
LTN1-205ENST00000483326 ARHGEF11O15085 1522 aa4.87□□□□□ -1.63
LTN1-205ENST00000483326 NBNO60934 754 aa4.87□□□□□ -1.63
LTN1-205ENST00000483326 CEACAM5P06731 702 aa4.87□□□□□ -1.63
LTN1-205ENST00000483326 PYGMP11217 842 aa4.87□□□□□ -1.63
LTN1-205ENST00000483326 FUT4P22083 530 aa4.87□□□□□ -1.63
LTN1-205ENST00000483326 CCND1P24385 295 aa4.87□□□□□ -1.63
LTN1-205ENST00000483326 TDO2P48775 406 aa4.87□□□□□ -1.63
LTN1-205ENST00000483326 OXCT1P55809 520 aa4.87□□□□□ -1.63
LTN1-205ENST00000483326 SLC9A5Q14940 896 aa4.87□□□□□ -1.63
LTN1-205ENST00000483326 ZYXQ15942 572 aaKnown RBP4.87□□□□□ -1.63
LTN1-205ENST00000483326 ZNF792Q3KQV3 632 aa4.87□□□□□ -1.63
LTN1-205ENST00000483326 ARHGAP29Q52LW3 1261 aa4.87□□□□□ -1.63
LTN1-205ENST00000483326 GPR158Q5T848 1215 aa4.87□□□□□ -1.63
LTN1-205ENST00000483326 YOD1Q5VVQ6 348 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms