RNA–Protein interactions for RNA: ENST00000483326.1

LTN1-205, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 1,753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-205ENST00000483326 AEBP2Q6ZN18 517 aaPredicted RBP17.52■□□□□ 0.4
LTN1-205ENST00000483326 CHIC1Q5VXU3 224 aa16.87■□□□□ 0.29
LTN1-205ENST00000483326 SENP3Q9H4L4 574 aaPredicted RBP15.01□□□□□ -0.01
LTN1-205ENST00000483326 PHF23Q9BUL5 403 aaPredicted RBP14.8□□□□□ -0.04
LTN1-205ENST00000483326 FOXD1Q16676 465 aa13.91□□□□□ -0.18
LTN1-205ENST00000483326 PLPPR3Q6T4P5 718 aa13.58□□□□□ -0.23
LTN1-205ENST00000483326 PPP6R1Q9UPN7 881 aa13.1□□□□□ -0.31
LTN1-205ENST00000483326 ADRA2BP18089 450 aa13.09□□□□□ -0.31
LTN1-205ENST00000483326 PIAS4Q8N2W9 510 aaPredicted RBP13.07□□□□□ -0.32
LTN1-205ENST00000483326 MSH5O43196 834 aa13.02□□□□□ -0.32
LTN1-205ENST00000483326 POTEDQ86YR6 584 aa12.51□□□□□ -0.41
LTN1-205ENST00000483326 SCAF1Q9H7N4 1312 aaKnown RBP12.09□□□□□ -0.47
LTN1-205ENST00000483326 MAPK8IP2Q13387 824 aaPredicted RBP11.96□□□□□ -0.49
LTN1-205ENST00000483326 DMRT2Q9Y5R5 561 aa11.91□□□□□ -0.5
LTN1-205ENST00000483326 PPP4R3CPQ6ZMV5 832 aa11.9□□□□□ -0.5
LTN1-205ENST00000483326 CNKSR2Q8WXI2 1034 aa11.67□□□□□ -0.54
LTN1-205ENST00000483326 NCBP3Q53F19 620 aaKnown RBP11.56□□□□□ -0.56
LTN1-205ENST00000483326 HOXD11P31277 338 aaPredicted RBP11.54□□□□□ -0.56
LTN1-205ENST00000483326 RNF216Q9NWF9 866 aaPredicted RBP11.51□□□□□ -0.57
LTN1-205ENST00000483326 DCAF8L1A6NGE4 600 aa11.41□□□□□ -0.58
LTN1-205ENST00000483326 NPM3O75607 178 aaKnown RBP11.31□□□□□ -0.6
LTN1-205ENST00000483326 KCNA4P22459 653 aa11.23□□□□□ -0.61
LTN1-205ENST00000483326 DNAJC5BQ9UF47 199 aa11.16□□□□□ -0.62
LTN1-205ENST00000483326 RNF39Q9H2S5 420 aa11.08□□□□□ -0.64
LTN1-205ENST00000483326 CACNB1Q02641 598 aaPredicted RBP11.05□□□□□ -0.64
LTN1-205ENST00000483326 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.02□□□□□ -0.651e-7■■■■□ 24.4
LTN1-205ENST00000483326 C1QBPQ07021 282 aaKnown RBP10.98□□□□□ -0.65
LTN1-205ENST00000483326 U3KPZ7 1027 aaPredicted RBP10.75□□□□□ -0.69
LTN1-205ENST00000483326 SLC4A2P04920 1241 aa10.75□□□□□ -0.69
LTN1-205ENST00000483326 SLC4A1APQ9BWU0 796 aaKnown RBP10.68□□□□□ -0.7
LTN1-205ENST00000483326 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.6□□□□□ -0.71
LTN1-205ENST00000483326 HNRNPUL2Q1KMD3 747 aaKnown RBP10.6□□□□□ -0.71
LTN1-205ENST00000483326 APLP2Q06481 763 aa10.6□□□□□ -0.71
LTN1-205ENST00000483326 CAPN15O75808 1086 aa10.56□□□□□ -0.72
LTN1-205ENST00000483326 SAMD1Q6SPF0 538 aaPredicted RBP10.53□□□□□ -0.72
LTN1-205ENST00000483326 SPINK5Q9NQ38 1064 aaPredicted RBP10.53□□□□□ -0.72
LTN1-205ENST00000483326 MYCNP04198 464 aaPredicted RBP10.5□□□□□ -0.73
LTN1-205ENST00000483326 FOXD4L1Q9NU39 408 aa10.47□□□□□ -0.73
LTN1-205ENST00000483326 ZNF219Q9P2Y4 722 aaPredicted RBP10.44□□□□□ -0.74
LTN1-205ENST00000483326 DSG3P32926 999 aa10.43□□□□□ -0.74
LTN1-205ENST00000483326 TRHP20396 242 aaPredicted RBP10.42□□□□□ -0.74
LTN1-205ENST00000483326 ZBTB22O15209 634 aa10.29□□□□□ -0.76
LTN1-205ENST00000483326 ABCB7O75027 752 aa10.29□□□□□ -0.76
LTN1-205ENST00000483326 ATXN8OSP0DMR3 200 aa10.18□□□□□ -0.78
LTN1-205ENST00000483326 POLA2Q14181 598 aa10.18□□□□□ -0.78
LTN1-205ENST00000483326 ATF5Q9Y2D1 282 aaPredicted RBP10.16□□□□□ -0.78
LTN1-205ENST00000483326 ZBTB12Q9Y330 459 aaPredicted RBP10.06□□□□□ -0.8
LTN1-205ENST00000483326 RBM42Q9BTD8 480 aaKnown RBP10.01□□□□□ -0.81
LTN1-205ENST00000483326 CSRNP3Q8WYN3 585 aa10.01□□□□□ -0.81
LTN1-205ENST00000483326 EHMT2Q96KQ7 1210 aa9.96□□□□□ -0.81
LTN1-205ENST00000483326 FBLN2P98095 1184 aa9.87□□□□□ -0.83
LTN1-205ENST00000483326 OSCARQ8IYS5 282 aa9.82□□□□□ -0.84
LTN1-205ENST00000483326 AKT1S1Q96B36 256 aa9.8□□□□□ -0.84
LTN1-205ENST00000483326 POTEHQ6S545 545 aa9.75□□□□□ -0.85
LTN1-205ENST00000483326 SPDYE2BA6NHP3 402 aa9.73□□□□□ -0.85
LTN1-205ENST00000483326 SPDYE6P0CI01 402 aa9.73□□□□□ -0.85
LTN1-205ENST00000483326 SPDYE2Q495Y8 402 aa9.73□□□□□ -0.85
LTN1-205ENST00000483326 MKRN4PQ13434 485 aaPredicted RBP9.72□□□□□ -0.85
LTN1-205ENST00000483326 CHRDL2Q6WN34 429 aa9.68□□□□□ -0.86
LTN1-205ENST00000483326 REM2Q8IYK8 340 aaPredicted RBP9.68□□□□□ -0.86
LTN1-205ENST00000483326 ZNF692Q9BU19 519 aaPredicted RBP9.63□□□□□ -0.87
LTN1-205ENST00000483326 SSUH2Q9Y2M2 353 aa9.58□□□□□ -0.88
LTN1-205ENST00000483326 PITPNM1O00562 1244 aa9.56□□□□□ -0.88
LTN1-205ENST00000483326 SPDYE1Q8NFV5 336 aaPredicted RBP9.52□□□□□ -0.88
LTN1-205ENST00000483326 PIP4P2Q8N4L2 257 aa9.47□□□□□ -0.89
LTN1-205ENST00000483326 PABPN1Q86U42 306 aaKnown RBP eCLIP9.47□□□□□ -0.89
LTN1-205ENST00000483326 CLEC11AQ9Y240 323 aa9.46□□□□□ -0.9
LTN1-205ENST00000483326 FXR2P51116 673 aaKnown RBP eCLIP9.45□□□□□ -0.9
LTN1-205ENST00000483326 SPDYE4A6NLX3 237 aa9.4□□□□□ -0.9
LTN1-205ENST00000483326 PRR29P0C7W0 189 aa9.35□□□□□ -0.91
LTN1-205ENST00000483326 PRKAR2AP13861 404 aaKnown RBP9.33□□□□□ -0.92
LTN1-205ENST00000483326 STAG3Q9UJ98 1225 aa9.32□□□□□ -0.92
LTN1-205ENST00000483326 HAX1O00165 279 aa9.28□□□□□ -0.92
LTN1-205ENST00000483326 CHADLQ6NUI6 762 aa9.22□□□□□ -0.93
LTN1-205ENST00000483326 SP7Q8TDD2 431 aaPredicted RBP9.21□□□□□ -0.94
LTN1-205ENST00000483326 PROM2Q8N271 834 aa9.19□□□□□ -0.94
LTN1-205ENST00000483326 C19orf67A6NJJ6 358 aa9.15□□□□□ -0.94
LTN1-205ENST00000483326 FARP1Q9Y4F1 1045 aaPredicted RBP9.15□□□□□ -0.94
LTN1-205ENST00000483326 CREBZFQ9NS37 354 aa9.12□□□□□ -0.95
LTN1-205ENST00000483326 EVX2Q03828 476 aa9.11□□□□□ -0.95
LTN1-205ENST00000483326 SLC24A1O60721 1099 aa9.1□□□□□ -0.95
LTN1-205ENST00000483326 FKBP8Q14318 412 aa9.09□□□□□ -0.95
LTN1-205ENST00000483326 CD44P16070 742 aaKnown RBP9.05□□□□□ -0.96
LTN1-205ENST00000483326 NPM1P06748 294 aaKnown RBP eCLIP9.04□□□□□ -0.96
LTN1-205ENST00000483326 PLEKHG5O94827 1062 aa9□□□□□ -0.97
LTN1-205ENST00000483326 CLCN6P51797 869 aa8.98□□□□□ -0.97
LTN1-205ENST00000483326 GABBR2O75899 941 aa8.96□□□□□ -0.97
LTN1-205ENST00000483326 PAK3O75914 559 aaPredicted RBP8.96□□□□□ -0.97
LTN1-205ENST00000483326 MNX1P50219 401 aaPredicted RBP8.96□□□□□ -0.97
LTN1-205ENST00000483326 MIER1Q8N108 512 aa8.96□□□□□ -0.97
LTN1-205ENST00000483326 ZRANB1Q9UGI0 708 aa8.95□□□□□ -0.98
LTN1-205ENST00000483326 ZNF579Q8NAF0 562 aaKnown RBP8.93□□□□□ -0.98
LTN1-205ENST00000483326 PLCD3Q8N3E9 789 aa8.92□□□□□ -0.98
LTN1-205ENST00000483326 FBXO3Q9UK99 471 aa8.92□□□□□ -0.98
LTN1-205ENST00000483326 ZBTB47Q9UFB7 747 aaPredicted RBP8.89□□□□□ -0.99
LTN1-205ENST00000483326 TSPYL2Q9H2G4 693 aaPredicted RBP8.81□□□□□ -1
LTN1-205ENST00000483326 PHF12Q96QT6 1004 aa8.81□□□□□ -1
LTN1-205ENST00000483326 DCBLD2Q96PD2 775 aa8.8□□□□□ -1
LTN1-205ENST00000483326 GALR2O43603 387 aaPredicted RBP8.76□□□□□ -1.01
LTN1-205ENST00000483326 RASEFQ8IZ41 740 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms