RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 ABCB5Q2M3G0 1257 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 MCMDC2Q4G0Z9 681 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 ABRAQ8N0Z2 381 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 EDC3Q96F86 508 aaKnown RBP5.82□□□□□ -1.48
PTCD3-213ENST00000480102 FSD1Q9BTV5 496 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 DSCC1Q9BVC3 393 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 PLVAPQ9BX97 442 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 ARMT1Q9H993 441 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 TCP11L1Q9NUJ3 509 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 HOXC10Q9NYD6 342 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 FAM13BQ9NYF5 915 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 PNMA2Q9UL42 364 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 ADAMTS5Q9UNA0 930 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 RABGAP1Q9Y3P9 1069 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 SLC4A4Q9Y6R1 1079 aa5.82□□□□□ -1.48
PTCD3-213ENST00000480102 ATP2A1O14983 1001 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 FOXP2O15409 715 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 LILRB5O75023 590 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 GH2P01242 217 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 XRCC5P13010 732 aaKnown RBP5.81□□□□□ -1.48
PTCD3-213ENST00000480102 NID1P14543 1247 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 SDSP20132 328 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 GUCY1A2P33402 732 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 COPB2P35606 906 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 CDK8P49336 464 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 GPLD1P80108 840 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 PDE4BQ07343 736 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 SPP2Q13103 211 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 TRIP4Q15650 581 aaPredicted RBP5.81□□□□□ -1.48
PTCD3-213ENST00000480102 CCDC178Q5BJE1 867 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 BMP2KLQ5H9B9 411 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 IFNL3Q8IZI9 196 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 GMCL1P1Q8NEA9 526 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 SHCBP1Q8NEM2 672 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 HELQQ8TDG4 1101 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 OTUD7AQ8TE49 926 aaPredicted RBP5.81□□□□□ -1.48
PTCD3-213ENST00000480102 SDR42E1Q8WUS8 393 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 TTC14Q96N46 770 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 MTA3Q9BTC8 594 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 TANGO6Q9C0B7 1094 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 LNPKQ9C0E8 428 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 MCOLN1Q9GZU1 580 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 RNF41Q9H4P4 317 aaPredicted RBP5.81□□□□□ -1.48
PTCD3-213ENST00000480102 VCPKMTQ9H867 229 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 EPB41L4AQ9HCS5 686 aaPredicted RBP5.81□□□□□ -1.48
PTCD3-213ENST00000480102 TMOD4Q9NZQ9 345 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 FZD1Q9UP38 647 aa5.81□□□□□ -1.48
PTCD3-213ENST00000480102 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.81□□□□□ -1.48
PTCD3-213ENST00000480102 CCDC171Q6TFL3 1326 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 CARNS1A5YM72 827 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 TRIM75PA6NK02 468 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 SPDYE3A6NKU9 549 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 ZBTB39O15060 712 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 WDR46O15213 610 aaKnown RBP5.8□□□□□ -1.48
PTCD3-213ENST00000480102 STRNO43815 780 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 TBC1D8O95759 1140 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 IGHA2P01877 340 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 HOXC6P09630 235 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 SPATA31C1P0DKV0 1188 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 VCAM1P19320 739 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 MAPK4P31152 587 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 SCNN1AP37088 669 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 FCGRTP55899 365 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 CCNA1P78396 465 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 JAG1P78504 1218 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 GRM1Q13255 1194 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 TTC22Q5TAA0 569 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 PSAPL1Q6NUJ1 521 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 CATSPERGQ6ZRH7 1159 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 OTOP1Q7RTM1 612 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 NBPF11Q86T75 865 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 FAM35AQ86V20 835 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 SIAH1Q8IUQ4 282 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 TEX2Q8IWB9 1127 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 SMCR8Q8TEV9 937 aaPredicted RBP5.8□□□□□ -1.48
PTCD3-213ENST00000480102 RUFY2Q8WXA3 655 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 SOCS4Q8WXH5 440 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 PIK3R5Q8WYR1 880 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 ANKS1AQ92625 1134 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 ABHD8Q96I13 439 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 NAPBQ9H115 298 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 ASCC2Q9H1I8 757 aaPredicted RBP5.8□□□□□ -1.48
PTCD3-213ENST00000480102 JPH1Q9HDC5 661 aaPredicted RBP5.8□□□□□ -1.48
PTCD3-213ENST00000480102 MTMR4Q9NYA4 1195 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 SRRDQ9UH36 339 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 NRBP1Q9UHY1 535 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 CTNNA3Q9UI47 895 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 PTPN22Q9Y2R2 807 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 DOCK2Q92608 1830 aa5.8□□□□□ -1.48
PTCD3-213ENST00000480102 DDX60LQ5H9U9 1706 aaKnown RBP5.79□□□□□ -1.48
PTCD3-213ENST00000480102 LOC102724159A0A0B4J2E5 919 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 ZBTB42B2RXF5 422 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 PRKAB2O43741 272 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 EIF5BO60841 1220 aaKnown RBP5.79□□□□□ -1.48
PTCD3-213ENST00000480102 TTLL1O95922 423 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 FGAP02671 866 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 PROCP04070 461 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 HSPD1P10809 573 aaKnown RBP5.79□□□□□ -1.48
PTCD3-213ENST00000480102 CPB1P15086 417 aa5.79□□□□□ -1.48
PTCD3-213ENST00000480102 OAZ1P54368 228 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms