RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 SLC5A5Q92911 643 aa12.63□□□□□ -0.39
APTX-223ENST00000479656 CCDC102AQ96A19 550 aa12.63□□□□□ -0.39
APTX-223ENST00000479656 PARK7Q99497 189 aaKnown RBP12.63□□□□□ -0.39
APTX-223ENST00000479656 PYM1Q9BRP8 204 aaKnown RBP12.63□□□□□ -0.39
APTX-223ENST00000479656 MROH8Q9H579 483 aa12.63□□□□□ -0.39
APTX-223ENST00000479656 KCNH7Q9NS40 1196 aa12.63□□□□□ -0.39
APTX-223ENST00000479656 KIAA1468Q9P260 1216 aa12.63□□□□□ -0.39
APTX-223ENST00000479656 A0A087WWV3 80 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 GOLGA6L3A6NEY3 463 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 PSMD10O75832 226 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 CCDC192P0DO97 292 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 BCRP11274 1271 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 CCND2P30279 289 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 STAT6P42226 847 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 SETQ01105 290 aaPredicted RBP12.62□□□□□ -0.39
APTX-223ENST00000479656 SPIRE1Q08AE8 756 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 GRM1Q13255 1194 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 NAALADL2Q58DX5 795 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 KRT79Q5XKE5 535 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 NCAPH2Q6IBW4 605 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 PDXDC2PQ6P474 469 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 OTOP1Q7RTM1 612 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 NIPA1Q7RTP0 329 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 SHCBP1Q8NEM2 672 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 DNERQ8NFT8 737 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 SNX29Q8TEQ0 813 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 CALML4Q96GE6 196 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 PAGE5Q96GU1 130 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 MMP19Q99542 508 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 PKD2L1Q9P0L9 805 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 USP25Q9UHP3 1055 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 ASTN1O14525 1302 aa12.62□□□□□ -0.39
APTX-223ENST00000479656 FSD2A1L4K1 749 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 SOWAHBA6NEL2 793 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 IPO5O00410 1097 aaKnown RBP12.61□□□□□ -0.39
APTX-223ENST00000479656 PGK2P07205 417 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 PRR29P0C7W0 189 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 PLCG1P19174 1290 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 YY1P25490 414 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 INHBEP58166 350 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 CCNA1P78396 465 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 TYRO3Q06418 890 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 FSTL1Q12841 308 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 GRB10Q13322 594 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 MTMR1Q13613 665 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 KCTD2Q14681 263 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 POSTNQ15063 836 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 ECM1Q16610 540 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 LRCH2Q5VUJ6 765 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 XRRA1Q6P2D8 792 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 PAXIP1Q6ZW49 1069 aaPredicted RBP12.61□□□□□ -0.39
APTX-223ENST00000479656 SH3RF1Q7Z6J0 888 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 LRRC15Q8TF66 581 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 PNMA5Q96PV4 448 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 ZIC5Q96T25 663 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 RBSNQ9H1K0 784 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 MORF4L1Q9UBU8 362 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 HOOK1Q9UJC3 728 aaKnown RBP12.61□□□□□ -0.39
APTX-223ENST00000479656 VAV3Q9UKW4 847 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 PCDHA5Q9Y5H7 936 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 GAS7O60861 476 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 FCER1AP12319 257 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 CASP1P29466 404 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 CCT6AP40227 531 aaKnown RBP12.61□□□□□ -0.39
APTX-223ENST00000479656 ALDH5A1P51649 535 aaPredicted RBP12.61□□□□□ -0.39
APTX-223ENST00000479656 ISM2Q6H9L7 571 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.61□□□□□ -0.39
APTX-223ENST00000479656 IFNL1Q8IU54 200 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 FAM133AQ8N9E0 248 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 ZNF784Q8NCA9 323 aaPredicted RBP12.61□□□□□ -0.39
APTX-223ENST00000479656 CDK5RAP3Q96JB5 506 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 IWS1Q96ST2 819 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 MTRQ99707 1265 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 AGO4Q9HCK5 861 aaKnown RBP12.61□□□□□ -0.39
APTX-223ENST00000479656 CPA4Q9UI42 421 aa12.61□□□□□ -0.39
APTX-223ENST00000479656 DDX39AO00148 427 aaKnown RBP12.6□□□□□ -0.39
APTX-223ENST00000479656 EML1O00423 815 aa12.6□□□□□ -0.39
APTX-223ENST00000479656 BIN1O00499 593 aa12.6□□□□□ -0.39
APTX-223ENST00000479656 ATP9AO75110 1047 aa12.6□□□□□ -0.39
APTX-223ENST00000479656 RGS20O76081 388 aa12.6□□□□□ -0.39
APTX-223ENST00000479656 TAF1CQ15572 869 aaPredicted RBP12.6□□□□□ -0.39
APTX-223ENST00000479656 CYP4F22Q6NT55 531 aa12.6□□□□□ -0.39
APTX-223ENST00000479656 CCDC34Q96HJ3 373 aa12.6□□□□□ -0.39
APTX-223ENST00000479656 HHIPL1Q96JK4 782 aa12.6□□□□□ -0.39
APTX-223ENST00000479656 TEKT3Q9BXF9 490 aa12.6□□□□□ -0.39
APTX-223ENST00000479656 ADD3Q9UEY8 706 aaKnown RBP12.6□□□□□ -0.39
APTX-223ENST00000479656 TUBE1Q9UJT0 475 aa12.6□□□□□ -0.39
APTX-223ENST00000479656 DNAJC25-GNG10A0A024R161 153 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 DHX15O43143 795 aaKnown RBP12.59□□□□□ -0.39
APTX-223ENST00000479656 CHMP2AO43633 222 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 MED24O75448 989 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 STXBP2Q15833 593 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 NLRX1Q86UT6 975 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 PIAS4Q8N2W9 510 aaPredicted RBP12.59□□□□□ -0.39
APTX-223ENST00000479656 RNF214Q8ND24 703 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 INPP4AQ96PE3 977 aaPredicted RBP12.59□□□□□ -0.39
APTX-223ENST00000479656 RIT2Q99578 217 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 BLZF1Q9H2G9 400 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 UNC45AQ9H3U1 944 aa12.59□□□□□ -0.39
APTX-223ENST00000479656 ITGB3BPQ13352 177 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms