RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 BMP1P13497 986 aa15.24■□□□□ 0.03
MRPL55-228ENST00000476267 HOXA13P31271 388 aaPredicted RBP15.24■□□□□ 0.03
MRPL55-228ENST00000476267 HOXC8P31273 242 aa15.24■□□□□ 0.03
MRPL55-228ENST00000476267 CHMP4BP1P59074 171 aa15.24■□□□□ 0.03
MRPL55-228ENST00000476267 DEFB103AP81534 67 aa15.24■□□□□ 0.03
MRPL55-228ENST00000476267 SP2Q02086 613 aa15.24■□□□□ 0.03
MRPL55-228ENST00000476267 PTH1RQ03431 593 aa15.24■□□□□ 0.03
MRPL55-228ENST00000476267 PTK7Q13308 1070 aa15.24■□□□□ 0.03
MRPL55-228ENST00000476267 MBTPS1Q14703 1052 aa15.24■□□□□ 0.03
MRPL55-228ENST00000476267 KIAA0753Q2KHM9 967 aa15.24■□□□□ 0.03
MRPL55-228ENST00000476267 HSDL1Q3SXM5 330 aa15.24■□□□□ 0.03
MRPL55-228ENST00000476267 CELF3Q5SZQ8 465 aaKnown RBP15.24■□□□□ 0.03
MRPL55-228ENST00000476267 CNKSR3Q6P9H4 555 aa15.24■□□□□ 0.03
MRPL55-228ENST00000476267 DHX37Q8IY37 1157 aaKnown RBP15.24■□□□□ 0.03
MRPL55-228ENST00000476267 GPKOWQ92917 476 aaPredicted RBP eCLIP15.24■□□□□ 0.03
MRPL55-228ENST00000476267 PIGSQ96S52 555 aa15.24■□□□□ 0.03
MRPL55-228ENST00000476267 CERS4Q9HA82 394 aa15.24■□□□□ 0.03
MRPL55-228ENST00000476267 PPFIA4O75335 1185 aa15.23■□□□□ 0.03
MRPL55-228ENST00000476267 UBA1P22314 1058 aaKnown RBP15.23■□□□□ 0.03
MRPL55-228ENST00000476267 CHMLP26374 656 aa15.23■□□□□ 0.03
MRPL55-228ENST00000476267 TFF2Q03403 129 aa15.23■□□□□ 0.03
MRPL55-228ENST00000476267 KRT40Q6A162 431 aa15.23■□□□□ 0.03
MRPL55-228ENST00000476267 KCNV1Q6PIU1 500 aa15.23■□□□□ 0.03
MRPL55-228ENST00000476267 TMCO2Q7Z6W1 182 aaPredicted RBP15.23■□□□□ 0.03
MRPL55-228ENST00000476267 C7orf31Q8N865 590 aa15.23■□□□□ 0.03
MRPL55-228ENST00000476267 YTHDC1Q96MU7 727 aaKnown RBP15.23■□□□□ 0.03
MRPL55-228ENST00000476267 C16orf70Q9BSU1 422 aa15.23■□□□□ 0.03
MRPL55-228ENST00000476267 ALG1Q9BT22 464 aa15.23■□□□□ 0.03
MRPL55-228ENST00000476267 DOCK5Q9H7D0 1870 aa15.23■□□□□ 0.03
MRPL55-228ENST00000476267 GGPS1O95749 300 aa15.22■□□□□ 0.03
MRPL55-228ENST00000476267 TGFB3P10600 412 aa15.22■□□□□ 0.03
MRPL55-228ENST00000476267 MYCLP12524 364 aaPredicted RBP15.22■□□□□ 0.03
MRPL55-228ENST00000476267 ANTXR2P58335 489 aa15.22■□□□□ 0.03
MRPL55-228ENST00000476267 ZNF200P98182 395 aaPredicted RBP15.22■□□□□ 0.03
MRPL55-228ENST00000476267 GRB10Q13322 594 aa15.22■□□□□ 0.03
MRPL55-228ENST00000476267 ZNF618Q5T7W0 954 aa15.22■□□□□ 0.03
MRPL55-228ENST00000476267 HOMER1Q86YM7 354 aa15.22■□□□□ 0.03
MRPL55-228ENST00000476267 MICALL1Q8N3F8 863 aa15.22■□□□□ 0.03
MRPL55-228ENST00000476267 ARNTL2Q8WYA1 636 aa15.22■□□□□ 0.03
MRPL55-228ENST00000476267 UHRF1Q96T88 793 aaPredicted RBP15.22■□□□□ 0.03
MRPL55-228ENST00000476267 BCAS3Q9H6U6 928 aa15.22■□□□□ 0.03
MRPL55-228ENST00000476267 MICAL3Q7RTP6 2002 aa15.22■□□□□ 0.03
MRPL55-228ENST00000476267 COL4A6Q14031 1691 aa15.22■□□□□ 0.03
MRPL55-228ENST00000476267 TTC28Q96AY4 2481 aa15.21■□□□□ 0.03
MRPL55-228ENST00000476267 ABHD14A-ACY1A0A1B0GW23 586 aa15.21■□□□□ 0.03
MRPL55-228ENST00000476267 KIF28PB7ZC32 967 aa15.21■□□□□ 0.03
MRPL55-228ENST00000476267 E7EWF7 191 aa15.21■□□□□ 0.03
MRPL55-228ENST00000476267 TLL1O43897 1013 aa15.21■□□□□ 0.03
MRPL55-228ENST00000476267 GJB5O95377 273 aa15.21■□□□□ 0.03
MRPL55-228ENST00000476267 KCNJ6P48051 423 aa15.21■□□□□ 0.03
MRPL55-228ENST00000476267 MRPS9P82933 396 aaKnown RBP15.21■□□□□ 0.03
MRPL55-228ENST00000476267 SERINC5Q86VE9 423 aa15.21■□□□□ 0.03
MRPL55-228ENST00000476267 U3KPZ7 1027 aaPredicted RBP15.21■□□□□ 0.03
MRPL55-228ENST00000476267 PNMA6FA0A0J9YX94 578 aa15.2■□□□□ 0.02
MRPL55-228ENST00000476267 GCOM1H8Y6P7 765 aaPredicted RBP15.2■□□□□ 0.02
MRPL55-228ENST00000476267 IFIT3O14879 490 aaKnown RBP15.2■□□□□ 0.02
MRPL55-228ENST00000476267 SGSM2O43147 1006 aa15.2■□□□□ 0.02
MRPL55-228ENST00000476267 GTPBP6O43824 516 aaPredicted RBP15.2■□□□□ 0.02
MRPL55-228ENST00000476267 POLR2MP0CAP2 368 aa15.2■□□□□ 0.02
MRPL55-228ENST00000476267 CCND2P30279 289 aa15.2■□□□□ 0.02
MRPL55-228ENST00000476267 ICAM3P32942 547 aa15.2■□□□□ 0.02
MRPL55-228ENST00000476267 KCNQ1P51787 676 aa15.2■□□□□ 0.02
MRPL55-228ENST00000476267 TRDNQ13061 729 aa15.2■□□□□ 0.02
MRPL55-228ENST00000476267 SEMA3FQ13275 785 aa15.2■□□□□ 0.02
MRPL55-228ENST00000476267 MB21D2Q8IYB1 491 aaPredicted RBP15.2■□□□□ 0.02
MRPL55-228ENST00000476267 IGDCC4Q8TDY8 1250 aa15.2■□□□□ 0.02
MRPL55-228ENST00000476267 ZFP91Q96JP5 570 aaPredicted RBP15.2■□□□□ 0.02
MRPL55-228ENST00000476267 SPATA33Q96N06 139 aa15.2■□□□□ 0.02
MRPL55-228ENST00000476267 NECAB3Q96P71 396 aaPredicted RBP15.2■□□□□ 0.02
MRPL55-228ENST00000476267 INPP4AQ96PE3 977 aaPredicted RBP15.2■□□□□ 0.02
MRPL55-228ENST00000476267 TSPYL2Q9H2G4 693 aaPredicted RBP15.2■□□□□ 0.02
MRPL55-228ENST00000476267 TCF20Q9UGU0 1960 aaKnown RBP15.2■□□□□ 0.02
MRPL55-228ENST00000476267 SORBS3O60504 671 aa15.19■□□□□ 0.02
MRPL55-228ENST00000476267 LGALS2P05162 132 aa15.19■□□□□ 0.02
MRPL55-228ENST00000476267 TRAF1Q13077 416 aa15.19■□□□□ 0.02
MRPL55-228ENST00000476267 WTAPQ15007 396 aa15.19■□□□□ 0.02
MRPL55-228ENST00000476267 NCOA7Q8NI08 942 aa15.19■□□□□ 0.02
MRPL55-228ENST00000476267 RUFY2Q8WXA3 655 aa15.19■□□□□ 0.02
MRPL55-228ENST00000476267 MAP4K1Q92918 833 aa15.19■□□□□ 0.02
MRPL55-228ENST00000476267 RAD9AQ99638 391 aa15.19■□□□□ 0.02
MRPL55-228ENST00000476267 MYO9BQ13459 2157 aa15.18■□□□□ 0.02
MRPL55-228ENST00000476267 LINC01553A4QN01 128 aa15.18■□□□□ 0.02
MRPL55-228ENST00000476267 SPATA31C2B4DYI2 1134 aa15.18■□□□□ 0.02
MRPL55-228ENST00000476267 H3BRB1 525 aa15.18■□□□□ 0.02
MRPL55-228ENST00000476267 EFCAB14O75071 495 aa15.18■□□□□ 0.02
MRPL55-228ENST00000476267 LGR5O75473 907 aa15.18■□□□□ 0.02
MRPL55-228ENST00000476267 STAM2O75886 525 aa15.18■□□□□ 0.02
MRPL55-228ENST00000476267 ERVK-21P61565 698 aa15.18■□□□□ 0.02
MRPL55-228ENST00000476267 IKBKEQ14164 716 aa15.18■□□□□ 0.02
MRPL55-228ENST00000476267 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.18■□□□□ 0.02
MRPL55-228ENST00000476267 FCHSD1Q86WN1 690 aa15.18■□□□□ 0.02
MRPL55-228ENST00000476267 MAP3K14Q99558 947 aa15.18■□□□□ 0.02
MRPL55-228ENST00000476267 SPZ1Q9BXG8 430 aa15.18■□□□□ 0.02
MRPL55-228ENST00000476267 OSBPL7Q9BZF2 842 aa15.18■□□□□ 0.02
MRPL55-228ENST00000476267 TUT1Q9H6E5 874 aaKnown RBP15.18■□□□□ 0.02
MRPL55-228ENST00000476267 LY9Q9HBG7 655 aa15.18■□□□□ 0.02
MRPL55-228ENST00000476267 LMCD1Q9NZU5 365 aa15.18■□□□□ 0.02
MRPL55-228ENST00000476267 COG5Q9UP83 839 aa15.18■□□□□ 0.02
MRPL55-228ENST00000476267 TELO2Q9Y4R8 837 aa15.18■□□□□ 0.02
MRPL55-228ENST00000476267 PRRC2BQ5JSZ5 2229 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms