RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 KLHDC9Q8NEP7 349 aa10.9□□□□□ -0.66
SEMA3C-208ENST00000475955 CACTINQ8WUQ7 758 aaKnown RBP10.9□□□□□ -0.66
SEMA3C-208ENST00000475955 TCEANC2Q96MN5 208 aa10.9□□□□□ -0.66
SEMA3C-208ENST00000475955 SDF4Q9BRK5 362 aa10.9□□□□□ -0.66
SEMA3C-208ENST00000475955 KRT23Q9C075 422 aa10.9□□□□□ -0.66
SEMA3C-208ENST00000475955 ZHX1Q9UKY1 873 aaPredicted RBP10.9□□□□□ -0.66
SEMA3C-208ENST00000475955 PHF24Q9UPV7 400 aa10.9□□□□□ -0.66
SEMA3C-208ENST00000475955 KBTBD13C9JR72 458 aa10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 IKBKBO14920 756 aa10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 SKILP12757 684 aa10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 PDIA3P30101 505 aaKnown RBP10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 MAGEA10P43363 369 aaPredicted RBP10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 NT5C2P49902 561 aa10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 ANTXR2P58335 489 aa10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 CCDC178Q5BJE1 867 aa10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 GPATCH4Q5T3I0 446 aaKnown RBP10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 TAPT1Q6NXT6 567 aa10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 SLC30A10Q6XR72 485 aa10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 CHST3Q7LGC8 479 aa10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 ADGRF4Q8IZF3 695 aa10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 FMR1NBQ8N0W7 255 aaPredicted RBP10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 ZNF397Q8NF99 534 aaPredicted RBP10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 MORC4Q8TE76 937 aa10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 TBC1D5Q92609 795 aa10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 C16orf45Q96MC5 204 aaPredicted RBP10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 ABHD16BQ9H3Z7 469 aa10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 KAT14Q9H8E8 782 aa10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 CNNM2Q9H8M5 875 aa10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 PDGFCQ9NRA1 345 aa10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 HOOK1Q9UJC3 728 aaKnown RBP10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 FAM184BQ9ULE4 1060 aa10.89□□□□□ -0.67
SEMA3C-208ENST00000475955 A0A1W2PQ45 241 aaPredicted RBP10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 A0A1W2PQY0 241 aa10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 CCDC69A6NI79 296 aa10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 SOX1O00570 391 aaPredicted RBP10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 DUSP11O75319 330 aaKnown RBP10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 BMP8BP34820 402 aa10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 NLRP12P59046 1061 aa10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 NCBP1Q09161 790 aaKnown RBP10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 APOBRQ0VD83 1088 aa10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 SNW1Q13573 536 aaKnown RBP10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 TRIM60Q495X7 471 aa10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 NYAP1Q6ZVC0 841 aa10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 EEPD1Q7L9B9 569 aa10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 SH3RF1Q7Z6J0 888 aa10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 RALYLQ86SE5 291 aaKnown RBP10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 C8orf76Q96K31 380 aa10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 USP28Q96RU2 1077 aa10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 UBAC1Q9BSL1 405 aa10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 UPF3AQ9H1J1 476 aaKnown RBP10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 JMJD4Q9H9V9 463 aa10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 GPHNQ9NQX3 736 aaPredicted RBP10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 KIAA1468Q9P260 1216 aa10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 ATP11BQ9Y2G3 1177 aa10.88□□□□□ -0.67
SEMA3C-208ENST00000475955 CPLX1O14810 134 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 SPTLC2O15270 562 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 PPP1R11O60927 126 aaPredicted RBP10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 SLU7O95391 586 aaKnown RBP10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 CTDNEP1O95476 244 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 TPM1P09493 284 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 PARP1P09874 1014 aaKnown RBP10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 SMPD1P17405 629 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 CMA1P23946 247 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 ALDH5A1P51649 535 aaPredicted RBP10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 ACLYP53396 1101 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 GJA9P57773 515 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 RPS6P62753 249 aaKnown RBP10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 MDM2Q00987 491 aaPredicted RBP10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 LRMPQ12912 555 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 TRDNQ13061 729 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 KCNA10Q16322 511 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 CDC37Q16543 378 aaPredicted RBP10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 QRICH1Q2TAL8 776 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 USH1GQ495M9 461 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 ASPRV1Q53RT3 343 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 IFIT1BQ5T764 474 aaKnown RBP10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 C1orf53Q5VUE5 145 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 C11orf57Q6ZUT1 292 aaPredicted RBP10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 RNF180Q86T96 592 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 FCHSD1Q86WN1 690 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 DHX40Q8IX18 779 aaKnown RBP10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 FBXO16Q8IX29 292 aaPredicted RBP10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 MB21D2Q8IYB1 491 aaPredicted RBP10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 ELOA2Q8IYF1 753 aaPredicted RBP10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 LINC00301Q8NCQ3 95 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 FBXO18Q8NFZ0 1043 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 NCOA7Q8NI08 942 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 IGDCC4Q8TDY8 1250 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 SRRTQ9BXP5 876 aaKnown RBP10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 VAT1LQ9HCJ6 419 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 COL20A1Q9P218 1284 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 MAD2L2Q9UI95 211 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 PRDM4Q9UKN5 801 aa10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 GNEQ9Y223 722 aaKnown RBP10.87□□□□□ -0.67
SEMA3C-208ENST00000475955 TRIM43BA6NCK2 446 aa10.86□□□□□ -0.67
SEMA3C-208ENST00000475955 PALM3A6NDB9 673 aaPredicted RBP10.86□□□□□ -0.67
SEMA3C-208ENST00000475955 GOLGA6L9A6NEM1 432 aa10.86□□□□□ -0.67
SEMA3C-208ENST00000475955 ASB14A6NK59 587 aa10.86□□□□□ -0.67
SEMA3C-208ENST00000475955 OPLAHO14841 1288 aa10.86□□□□□ -0.67
SEMA3C-208ENST00000475955 ZSCAN20P17040 1043 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms