RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 PTPROQ16827 1216 aa14.36□□□□□ -0.11
TTC38-206ENST00000475467 GNPTABQ3T906 1256 aa14.36□□□□□ -0.11
TTC38-206ENST00000475467 CELF3Q5SZQ8 465 aaKnown RBP14.36□□□□□ -0.11
TTC38-206ENST00000475467 TBC1D5Q92609 795 aa14.36□□□□□ -0.11
TTC38-206ENST00000475467 DHX38Q92620 1227 aaKnown RBP14.36□□□□□ -0.11
TTC38-206ENST00000475467 PDCD2LQ9BRP1 358 aa14.36□□□□□ -0.11
TTC38-206ENST00000475467 USP26Q9BXU7 913 aa14.36□□□□□ -0.11
TTC38-206ENST00000475467 LNPKQ9C0E8 428 aa14.36□□□□□ -0.11
TTC38-206ENST00000475467 BDP1A6H8Y1 2624 aa14.36□□□□□ -0.11
TTC38-206ENST00000475467 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.35□□□□□ -0.11
TTC38-206ENST00000475467 EPOPA6NHQ4 379 aa14.35□□□□□ -0.11
TTC38-206ENST00000475467 KLRF2D3W0D1 207 aa14.35□□□□□ -0.11
TTC38-206ENST00000475467 EIF2AK2P19525 551 aaKnown RBP14.35□□□□□ -0.11
TTC38-206ENST00000475467 TMEM31Q5JXX7 168 aa14.35□□□□□ -0.11
TTC38-206ENST00000475467 CWC27Q6UX04 472 aaKnown RBP14.35□□□□□ -0.11
TTC38-206ENST00000475467 SERINC5Q86VE9 423 aa14.35□□□□□ -0.11
TTC38-206ENST00000475467 CHD1LQ86WJ1 897 aa14.35□□□□□ -0.11
TTC38-206ENST00000475467 SPATA33Q96N06 139 aa14.35□□□□□ -0.11
TTC38-206ENST00000475467 ALG1Q9BT22 464 aa14.35□□□□□ -0.11
TTC38-206ENST00000475467 SUGCTQ9HAC7 445 aa14.35□□□□□ -0.11
TTC38-206ENST00000475467 FAM50BQ9Y247 325 aa14.35□□□□□ -0.11
TTC38-206ENST00000475467 PCDHA1Q9Y5I3 950 aa14.35□□□□□ -0.11
TTC38-206ENST00000475467 LAMA4Q16363 1823 aa14.34□□□□□ -0.11
TTC38-206ENST00000475467 ERICH2A1L162 156 aa14.34□□□□□ -0.11
TTC38-206ENST00000475467 LINC01553A4QN01 128 aa14.34□□□□□ -0.11
TTC38-206ENST00000475467 RSPH10B2B2RC85 870 aa14.34□□□□□ -0.11
TTC38-206ENST00000475467 GCOM1H8Y6P7 765 aaPredicted RBP14.34□□□□□ -0.11
TTC38-206ENST00000475467 NCK2O43639 380 aa14.34□□□□□ -0.11
TTC38-206ENST00000475467 RSPH10BP0C881 870 aa14.34□□□□□ -0.11
TTC38-206ENST00000475467 POLR2MP0CAP2 368 aa14.34□□□□□ -0.11
TTC38-206ENST00000475467 CCND2P30279 289 aa14.34□□□□□ -0.11
TTC38-206ENST00000475467 HTRA4P83105 476 aaPredicted RBP14.34□□□□□ -0.11
TTC38-206ENST00000475467 NEDD9Q14511 834 aa14.34□□□□□ -0.11
TTC38-206ENST00000475467 PGM5Q15124 567 aa14.34□□□□□ -0.11
TTC38-206ENST00000475467 TRIM71Q2Q1W2 868 aaKnown RBP14.34□□□□□ -0.11
TTC38-206ENST00000475467 LEXMQ3ZCV2 418 aa14.34□□□□□ -0.11
TTC38-206ENST00000475467 ZNF618Q5T7W0 954 aa14.34□□□□□ -0.11
TTC38-206ENST00000475467 FAM43BQ6ZT52 329 aaPredicted RBP14.34□□□□□ -0.11
TTC38-206ENST00000475467 PLEKHM2Q8IWE5 1019 aa14.34□□□□□ -0.11
TTC38-206ENST00000475467 APBB2Q92870 758 aa14.34□□□□□ -0.11
TTC38-206ENST00000475467 CPVLQ9H3G5 476 aa14.34□□□□□ -0.11
TTC38-206ENST00000475467 MLXIPQ9HAP2 919 aa14.34□□□□□ -0.11
TTC38-206ENST00000475467 VAT1LQ9HCJ6 419 aa14.34□□□□□ -0.11
TTC38-206ENST00000475467 TRANK1O15050 2925 aa14.34□□□□□ -0.11
TTC38-206ENST00000475467 MYH7BA7E2Y1 1941 aa14.33□□□□□ -0.11
TTC38-206ENST00000475467 C17orf102A2RUQ5 167 aa14.33□□□□□ -0.12
TTC38-206ENST00000475467 PALM3A6NDB9 673 aaPredicted RBP14.33□□□□□ -0.12
TTC38-206ENST00000475467 H3BRB1 525 aa14.33□□□□□ -0.12
TTC38-206ENST00000475467 RPLP2P05387 115 aaKnown RBP14.33□□□□□ -0.12
TTC38-206ENST00000475467 HOXC8P31273 242 aa14.33□□□□□ -0.12
TTC38-206ENST00000475467 DEFB103AP81534 67 aa14.33□□□□□ -0.12
TTC38-206ENST00000475467 NUCB1Q02818 461 aa14.33□□□□□ -0.12
TTC38-206ENST00000475467 SART3Q15020 963 aaKnown RBP14.33□□□□□ -0.12
TTC38-206ENST00000475467 TIGD5Q53EQ6 642 aa14.33□□□□□ -0.12
TTC38-206ENST00000475467 PLEKHG4Q58EX7 1191 aa14.33□□□□□ -0.12
TTC38-206ENST00000475467 XRRA1Q6P2D8 792 aa14.33□□□□□ -0.12
TTC38-206ENST00000475467 GIMAP8Q8ND71 665 aaPredicted RBP14.33□□□□□ -0.12
TTC38-206ENST00000475467 SP7Q8TDD2 431 aaPredicted RBP14.33□□□□□ -0.12
TTC38-206ENST00000475467 SEPT8Q92599 483 aa14.33□□□□□ -0.12
TTC38-206ENST00000475467 NECAB3Q96P71 396 aaPredicted RBP14.33□□□□□ -0.12
TTC38-206ENST00000475467 LRFN3Q9BTN0 628 aa14.33□□□□□ -0.12
TTC38-206ENST00000475467 TUT1Q9H6E5 874 aaKnown RBP14.33□□□□□ -0.12
TTC38-206ENST00000475467 RIOX1Q9H6W3 641 aa14.33□□□□□ -0.12
TTC38-206ENST00000475467 UBE2ZQ9H832 354 aaPredicted RBP14.33□□□□□ -0.12
TTC38-206ENST00000475467 PI4K2BG5E9Z4 385 aa14.32□□□□□ -0.12
TTC38-206ENST00000475467 NOP56O00567 594 aaKnown RBP14.32□□□□□ -0.12
TTC38-206ENST00000475467 ARHGEF15O94989 841 aa14.32□□□□□ -0.12
TTC38-206ENST00000475467 GGPS1O95749 300 aa14.32□□□□□ -0.12
TTC38-206ENST00000475467 MYCLP12524 364 aaPredicted RBP14.32□□□□□ -0.12
TTC38-206ENST00000475467 ICAM3P32942 547 aa14.32□□□□□ -0.12
TTC38-206ENST00000475467 THPOP40225 353 aa14.32□□□□□ -0.12
TTC38-206ENST00000475467 HSDL1Q3SXM5 330 aa14.32□□□□□ -0.12
TTC38-206ENST00000475467 TRAF7Q6Q0C0 670 aa14.32□□□□□ -0.12
TTC38-206ENST00000475467 FBXO22Q8NEZ5 403 aa14.32□□□□□ -0.12
TTC38-206ENST00000475467 DBF4BQ8NFT6 615 aa14.32□□□□□ -0.12
TTC38-206ENST00000475467 ATP6V0A1Q93050 837 aa14.32□□□□□ -0.12
TTC38-206ENST00000475467 MRPL38Q96DV4 380 aaKnown RBP14.32□□□□□ -0.12
TTC38-206ENST00000475467 C16orf70Q9BSU1 422 aa14.32□□□□□ -0.12
TTC38-206ENST00000475467 ZNF215Q9UL58 517 aaPredicted RBP14.32□□□□□ -0.12
TTC38-206ENST00000475467 RWDD3Q9Y3V2 267 aa14.32□□□□□ -0.12
TTC38-206ENST00000475467 U3KPZ7 1027 aaPredicted RBP14.32□□□□□ -0.12
TTC38-206ENST00000475467 BRWD1Q9NSI6 2320 aa14.32□□□□□ -0.12
TTC38-206ENST00000475467 SIP14410 1827 aa14.31□□□□□ -0.12
TTC38-206ENST00000475467 PNMA6FA0A0J9YX94 578 aa14.31□□□□□ -0.12
TTC38-206ENST00000475467 LCHNA4D1U4 455 aa14.31□□□□□ -0.12
TTC38-206ENST00000475467 RGS20O76081 388 aa14.31□□□□□ -0.12
TTC38-206ENST00000475467 ZNF286BP0CG31 522 aa14.31□□□□□ -0.12
TTC38-206ENST00000475467 ALADP13716 330 aa14.31□□□□□ -0.12
TTC38-206ENST00000475467 UBA1P22314 1058 aaKnown RBP14.31□□□□□ -0.12
TTC38-206ENST00000475467 SMARCA1P28370 1054 aa14.31□□□□□ -0.12
TTC38-206ENST00000475467 MKRN4PQ13434 485 aaPredicted RBP14.31□□□□□ -0.12
TTC38-206ENST00000475467 SEC23AQ15436 765 aa14.31□□□□□ -0.12
TTC38-206ENST00000475467 KRT40Q6A162 431 aa14.31□□□□□ -0.12
TTC38-206ENST00000475467 METTL7BQ6UX53 244 aa14.31□□□□□ -0.12
TTC38-206ENST00000475467 RUFY2Q8WXA3 655 aa14.31□□□□□ -0.12
TTC38-206ENST00000475467 TOP1MTQ969P6 601 aa14.31□□□□□ -0.12
TTC38-206ENST00000475467 MAP3K14Q99558 947 aa14.31□□□□□ -0.12
TTC38-206ENST00000475467 SENP7Q9BQF6 1050 aa14.31□□□□□ -0.12
TTC38-206ENST00000475467 MAD2L2Q9UI95 211 aa14.31□□□□□ -0.12
TTC38-206ENST00000475467 COL4A6Q14031 1691 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms