RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 PTPROQ16827 1216 aa16.04■□□□□ 0.16
EPCAM-205ENST00000474691 ZNF618Q5T7W0 954 aa16.04■□□□□ 0.16
EPCAM-205ENST00000474691 MYOCDQ8IZQ8 938 aa16.04■□□□□ 0.16
EPCAM-205ENST00000474691 SAMD3Q8N6K7 520 aa16.04■□□□□ 0.16
EPCAM-205ENST00000474691 ENAHQ8N8S7 591 aaPredicted RBP16.04■□□□□ 0.16
EPCAM-205ENST00000474691 FBXO22Q8NEZ5 403 aa16.04■□□□□ 0.16
EPCAM-205ENST00000474691 DHX38Q92620 1227 aaKnown RBP16.04■□□□□ 0.16
EPCAM-205ENST00000474691 ANKS1AQ92625 1134 aa16.04■□□□□ 0.16
EPCAM-205ENST00000474691 ZSWIM5Q9P217 1185 aa16.04■□□□□ 0.16
EPCAM-205ENST00000474691 PRRC2BQ5JSZ5 2229 aaKnown RBP16.03■□□□□ 0.16
EPCAM-205ENST00000474691 RSPH10B2B2RC85 870 aa16.03■□□□□ 0.16
EPCAM-205ENST00000474691 KLRF2D3W0D1 207 aa16.03■□□□□ 0.16
EPCAM-205ENST00000474691 GCOM1H8Y6P7 765 aaPredicted RBP16.03■□□□□ 0.16
EPCAM-205ENST00000474691 ZBTB5O15062 677 aa16.03■□□□□ 0.16
EPCAM-205ENST00000474691 GGPS1O95749 300 aa16.03■□□□□ 0.16
EPCAM-205ENST00000474691 F2P00734 622 aa16.03■□□□□ 0.16
EPCAM-205ENST00000474691 RSPH10BP0C881 870 aa16.03■□□□□ 0.16
EPCAM-205ENST00000474691 POLR2MP0CAP2 368 aa16.03■□□□□ 0.16
EPCAM-205ENST00000474691 CCND2P30279 289 aa16.03■□□□□ 0.16
EPCAM-205ENST00000474691 SSTR3P32745 418 aaPredicted RBP16.03■□□□□ 0.16
EPCAM-205ENST00000474691 ERVK-21P61565 698 aa16.03■□□□□ 0.16
EPCAM-205ENST00000474691 AAMPQ13685 434 aa16.03■□□□□ 0.16
EPCAM-205ENST00000474691 EP400NLQ6ZTU2 488 aa16.03■□□□□ 0.16
EPCAM-205ENST00000474691 HOMER1Q86YM7 354 aa16.03■□□□□ 0.16
EPCAM-205ENST00000474691 ATP6V0A1Q93050 837 aa16.03■□□□□ 0.16
EPCAM-205ENST00000474691 DSCC1Q9BVC3 393 aa16.03■□□□□ 0.16
EPCAM-205ENST00000474691 EPHX3Q9H6B9 360 aa16.03■□□□□ 0.16
EPCAM-205ENST00000474691 LINC01553A4QN01 128 aa16.02■□□□□ 0.16
EPCAM-205ENST00000474691 TGFB3P10600 412 aa16.02■□□□□ 0.16
EPCAM-205ENST00000474691 GNAT1P11488 350 aa16.02■□□□□ 0.16
EPCAM-205ENST00000474691 HOXA13P31271 388 aaPredicted RBP16.02■□□□□ 0.16
EPCAM-205ENST00000474691 GNPTABQ3T906 1256 aa16.02■□□□□ 0.16
EPCAM-205ENST00000474691 CELF3Q5SZQ8 465 aaKnown RBP16.02■□□□□ 0.16
EPCAM-205ENST00000474691 CHD1LQ86WJ1 897 aa16.02■□□□□ 0.16
EPCAM-205ENST00000474691 FCHSD1Q86WN1 690 aa16.02■□□□□ 0.16
EPCAM-205ENST00000474691 YME1L1Q96TA2 773 aa16.02■□□□□ 0.16
EPCAM-205ENST00000474691 PDCD2LQ9BRP1 358 aa16.02■□□□□ 0.16
EPCAM-205ENST00000474691 LRFN3Q9BTN0 628 aa16.02■□□□□ 0.16
EPCAM-205ENST00000474691 SUGCTQ9HAC7 445 aa16.02■□□□□ 0.16
EPCAM-205ENST00000474691 TANC1Q9C0D5 1861 aa16.01■□□□□ 0.15
EPCAM-205ENST00000474691 LPXNO60711 386 aa16.01■□□□□ 0.15
EPCAM-205ENST00000474691 HSD17B4P51659 736 aa16.01■□□□□ 0.15
EPCAM-205ENST00000474691 ZNF200P98182 395 aaPredicted RBP16.01■□□□□ 0.15
EPCAM-205ENST00000474691 PGM5Q15124 567 aa16.01■□□□□ 0.15
EPCAM-205ENST00000474691 MYSM1Q5VVJ2 828 aa16.01■□□□□ 0.15
EPCAM-205ENST00000474691 DBF4BQ8NFT6 615 aa16.01■□□□□ 0.15
EPCAM-205ENST00000474691 SEPT8Q92599 483 aa16.01■□□□□ 0.15
EPCAM-205ENST00000474691 SAMD11Q96NU1 681 aa16.01■□□□□ 0.15
EPCAM-205ENST00000474691 UBE2ZQ9H832 354 aaPredicted RBP16.01■□□□□ 0.15
EPCAM-205ENST00000474691 TRIP12Q14669 1992 aaPredicted RBP16■□□□□ 0.15
EPCAM-205ENST00000474691 H3BRB1 525 aa16■□□□□ 0.15
EPCAM-205ENST00000474691 HAS3O00219 553 aa16■□□□□ 0.15
EPCAM-205ENST00000474691 UPP2O95045 317 aa16■□□□□ 0.15
EPCAM-205ENST00000474691 KCNA5P22460 613 aa16■□□□□ 0.15
EPCAM-205ENST00000474691 GPNMBQ14956 572 aa16■□□□□ 0.15
EPCAM-205ENST00000474691 SART3Q15020 963 aaKnown RBP16■□□□□ 0.15
EPCAM-205ENST00000474691 SPRED2Q7Z698 418 aa16■□□□□ 0.15
EPCAM-205ENST00000474691 STAG2Q8N3U4 1231 aa16■□□□□ 0.15
EPCAM-205ENST00000474691 CTAGE1Q96RT6 745 aa16■□□□□ 0.15
EPCAM-205ENST00000474691 TUT1Q9H6E5 874 aaKnown RBP16■□□□□ 0.15
EPCAM-205ENST00000474691 FAM50BQ9Y247 325 aa16■□□□□ 0.15
EPCAM-205ENST00000474691 UBA1P22314 1058 aaKnown RBP15.99■□□□□ 0.15
EPCAM-205ENST00000474691 NEDD9Q14511 834 aa15.99■□□□□ 0.15
EPCAM-205ENST00000474691 CSPP1Q1MSJ5 1256 aa15.99■□□□□ 0.15
EPCAM-205ENST00000474691 PUS10Q3MIT2 529 aaKnown RBP15.99■□□□□ 0.15
EPCAM-205ENST00000474691 HSDL1Q3SXM5 330 aa15.99■□□□□ 0.15
EPCAM-205ENST00000474691 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.99■□□□□ 0.15
EPCAM-205ENST00000474691 STOX1Q6ZVD7 989 aa15.99■□□□□ 0.15
EPCAM-205ENST00000474691 RALYLQ86SE5 291 aaKnown RBP15.99■□□□□ 0.15
EPCAM-205ENST00000474691 VSIG10LQ86VR7 867 aa15.99■□□□□ 0.15
EPCAM-205ENST00000474691 PLEKHM2Q8IWE5 1019 aa15.99■□□□□ 0.15
EPCAM-205ENST00000474691 CUL5Q93034 780 aa15.99■□□□□ 0.15
EPCAM-205ENST00000474691 USP26Q9BXU7 913 aa15.99■□□□□ 0.15
EPCAM-205ENST00000474691 ZNF215Q9UL58 517 aaPredicted RBP15.99■□□□□ 0.15
EPCAM-205ENST00000474691 IFIT3O14879 490 aaKnown RBP15.98■□□□□ 0.15
EPCAM-205ENST00000474691 CTSHP09668 335 aa15.98■□□□□ 0.15
EPCAM-205ENST00000474691 TIGD5Q53EQ6 642 aa15.98■□□□□ 0.15
EPCAM-205ENST00000474691 SERINC5Q86VE9 423 aa15.98■□□□□ 0.15
EPCAM-205ENST00000474691 GJD3Q8N144 294 aa15.98■□□□□ 0.15
EPCAM-205ENST00000474691 C17orf80Q9BSJ5 609 aa15.98■□□□□ 0.15
EPCAM-205ENST00000474691 OSBPL3Q9H4L5 887 aa15.98■□□□□ 0.15
EPCAM-205ENST00000474691 TET1Q8NFU7 2136 aa15.98■□□□□ 0.15
EPCAM-205ENST00000474691 CAND2O75155 1236 aa15.97■□□□□ 0.15
EPCAM-205ENST00000474691 STAM2O75886 525 aa15.97■□□□□ 0.15
EPCAM-205ENST00000474691 LGALS2P05162 132 aa15.97■□□□□ 0.15
EPCAM-205ENST00000474691 SMIM10L2AP0DMW4 78 aa15.97■□□□□ 0.15
EPCAM-205ENST00000474691 SMIM10L2BP0DMW5 78 aa15.97■□□□□ 0.15
EPCAM-205ENST00000474691 GPM6BQ13491 265 aa15.97■□□□□ 0.15
EPCAM-205ENST00000474691 TRIM71Q2Q1W2 868 aaKnown RBP15.97■□□□□ 0.15
EPCAM-205ENST00000474691 LEXMQ3ZCV2 418 aa15.97■□□□□ 0.15
EPCAM-205ENST00000474691 PTCRAQ6ISU1 281 aaPredicted RBP15.97■□□□□ 0.15
EPCAM-205ENST00000474691 SMC5Q8IY18 1101 aa15.97■□□□□ 0.15
EPCAM-205ENST00000474691 SMARCC2Q8TAQ2 1214 aa15.97■□□□□ 0.15
EPCAM-205ENST00000474691 RUFY2Q8WXA3 655 aa15.97■□□□□ 0.15
EPCAM-205ENST00000474691 APBB2Q92870 758 aa15.97■□□□□ 0.15
EPCAM-205ENST00000474691 MRPL38Q96DV4 380 aaKnown RBP15.97■□□□□ 0.15
EPCAM-205ENST00000474691 ZFP91Q96JP5 570 aaPredicted RBP15.97■□□□□ 0.15
EPCAM-205ENST00000474691 UIMC1Q96RL1 719 aa15.97■□□□□ 0.15
EPCAM-205ENST00000474691 PIGSQ96S52 555 aa15.97■□□□□ 0.15
EPCAM-205ENST00000474691 MAD2L2Q9UI95 211 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms