RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 KIAA1217Q5T5P2 1943 aa11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 GCOM1H8Y6P7 765 aaPredicted RBP11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 MEIS2O14770 477 aa11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 PRC1O43663 620 aa11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 GGPS1O95749 300 aa11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 F2P00734 622 aa11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 POLR2MP0CAP2 368 aa11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 CASTP20810 708 aaKnown RBP11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 MFSD10Q14728 455 aa11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 CCDC85BQ15834 202 aaPredicted RBP11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 CREB3L3Q68CJ9 461 aa11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 KRT40Q6A162 431 aa11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 RALYLQ86SE5 291 aaKnown RBP11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 DHX37Q8IY37 1157 aaKnown RBP11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 RASEFQ8IZ41 740 aa11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 RPUSD2Q8IZ73 545 aaKnown RBP11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 PPTC7Q8NI37 304 aa11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 MPHOSPH6Q99547 160 aaKnown RBP11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 CERS4Q9HA82 394 aa11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 GTF2IRD1Q9UHL9 959 aa11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 FRMPD4Q14CM0 1322 aa11.33□□□□□ -0.6
RPRD1B-204ENST00000471511 LCHNA4D1U4 455 aa11.32□□□□□ -0.6
RPRD1B-204ENST00000471511 B4DLN1 442 aa11.32□□□□□ -0.6
RPRD1B-204ENST00000471511 PITPNM1O00562 1244 aa11.32□□□□□ -0.6
RPRD1B-204ENST00000471511 CKBP12277 381 aa11.32□□□□□ -0.6
RPRD1B-204ENST00000471511 ATP2A2P16615 1042 aaKnown RBP11.32□□□□□ -0.6
RPRD1B-204ENST00000471511 MRPL12P52815 198 aaKnown RBP11.32□□□□□ -0.6
RPRD1B-204ENST00000471511 LAMC2Q13753 1193 aa11.32□□□□□ -0.6
RPRD1B-204ENST00000471511 DGKDQ16760 1214 aa11.32□□□□□ -0.6
RPRD1B-204ENST00000471511 KIAA0753Q2KHM9 967 aa11.32□□□□□ -0.6
RPRD1B-204ENST00000471511 BRDTQ58F21 947 aaPredicted RBP11.32□□□□□ -0.6
RPRD1B-204ENST00000471511 CATIPQ7Z7H3 387 aa11.32□□□□□ -0.6
RPRD1B-204ENST00000471511 TCEANC2Q96MN5 208 aa11.32□□□□□ -0.6
RPRD1B-204ENST00000471511 MSRAQ9UJ68 235 aa11.32□□□□□ -0.6
RPRD1B-204ENST00000471511 MYH6P13533 1939 aa11.32□□□□□ -0.6
RPRD1B-204ENST00000471511 MYO9BQ13459 2157 aa11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 TRIP12Q14669 1992 aaPredicted RBP11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 SPATA31C2B4DYI2 1134 aa11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 ADAMTS3O15072 1205 aa11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 ATP9AO75110 1047 aa11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 CA3P07451 260 aa11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 DEFB103AP81534 67 aa11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 RBL2Q08999 1139 aa11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 RAB30Q15771 203 aa11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 ADCK5Q3MIX3 580 aa11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 ZNF618Q5T7W0 954 aa11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 TYW1BQ6NUM6 668 aa11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 TRIM50Q86XT4 487 aa11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 CCDC82Q8N4S0 544 aa11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 RETREG2Q8NC44 543 aa11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 SPATA33Q96N06 139 aa11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 INPP4AQ96PE3 977 aaPredicted RBP11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 SPZ1Q9BXG8 430 aa11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 FTOQ9C0B1 505 aaKnown RBP eCLIP11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 MAP3K20Q9NYL2 800 aaKnown RBP11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 PCDHA11Q9Y5I1 949 aa11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 PTPRSQ13332 1948 aa11.31□□□□□ -0.6
RPRD1B-204ENST00000471511 TRANK1O15050 2925 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 ERICH2A1L162 156 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 PPFIA4O75335 1185 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 CXCL10P02778 98 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 SELPP16109 830 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 IGFBP4P22692 258 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 CCND2P30279 289 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 HOXC8P31273 242 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 ICAM3P32942 547 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 WDR5P61964 334 aaKnown RBP11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 EXOSC10Q01780 885 aaKnown RBP11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 TAP1Q03518 808 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 MKRN4PQ13434 485 aaPredicted RBP11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 UBE2SQ16763 222 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 LRRC8DQ7L1W4 858 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 CYFIP1Q7L576 1253 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 HERC6Q8IVU3 1022 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 SAMD3Q8N6K7 520 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 MAP3K14Q99558 947 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 GPR20Q99678 358 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 RNPEPQ9H4A4 650 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 SLC28A3Q9HAS3 691 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 FAM217BQ9NTX9 383 aaPredicted RBP11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 BRPF3Q9ULD4 1205 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 MYH7BA7E2Y1 1941 aa11.3□□□□□ -0.6
RPRD1B-204ENST00000471511 TREHO43280 583 aa11.29□□□□□ -0.6
RPRD1B-204ENST00000471511 LPXNO60711 386 aa11.29□□□□□ -0.6
RPRD1B-204ENST00000471511 DDAH1O94760 285 aa11.29□□□□□ -0.6
RPRD1B-204ENST00000471511 LGALS2P05162 132 aa11.29□□□□□ -0.6
RPRD1B-204ENST00000471511 PFKMP08237 780 aa11.29□□□□□ -0.6
RPRD1B-204ENST00000471511 CPA1P15085 419 aa11.29□□□□□ -0.6
RPRD1B-204ENST00000471511 MCM5P33992 734 aa11.29□□□□□ -0.6
RPRD1B-204ENST00000471511 RFC2P35250 354 aa11.29□□□□□ -0.6
RPRD1B-204ENST00000471511 LIFRP42702 1097 aa11.29□□□□□ -0.6
RPRD1B-204ENST00000471511 FUT2Q10981 343 aa11.29□□□□□ -0.6
RPRD1B-204ENST00000471511 PTK7Q13308 1070 aa11.29□□□□□ -0.6
RPRD1B-204ENST00000471511 BFSP2Q13515 415 aa11.29□□□□□ -0.6
RPRD1B-204ENST00000471511 PPP2R2DQ66LE6 453 aa11.29□□□□□ -0.6
RPRD1B-204ENST00000471511 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.29□□□□□ -0.6
RPRD1B-204ENST00000471511 TMTC3Q6ZXV5 915 aa11.29□□□□□ -0.6
RPRD1B-204ENST00000471511 C7orf31Q8N865 590 aa11.29□□□□□ -0.6
RPRD1B-204ENST00000471511 CAGE1Q8TC20 777 aa11.29□□□□□ -0.6
RPRD1B-204ENST00000471511 AFAP1L1Q8TED9 768 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms