RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 SCFD2Q8WU76 684 aa15.66■□□□□ 0.1
LINC00173-201ENST00000470091 GAS2L1Q99501 681 aaPredicted RBP15.66■□□□□ 0.1
LINC00173-201ENST00000470091 PRDM6Q9NQX0 595 aa15.66■□□□□ 0.1
LINC00173-201ENST00000470091 SLC4A7Q9Y6M7 1214 aa15.66■□□□□ 0.1
LINC00173-201ENST00000470091 LCTP09848 1927 aa15.65■□□□□ 0.1
LINC00173-201ENST00000470091 B4DLN1 442 aa15.65■□□□□ 0.1
LINC00173-201ENST00000470091 SUPT20HL2P0C7V6 817 aa15.65■□□□□ 0.1
LINC00173-201ENST00000470091 MYOGP15173 224 aa15.65■□□□□ 0.1
LINC00173-201ENST00000470091 CDC27P30260 824 aa15.65■□□□□ 0.1
LINC00173-201ENST00000470091 MRPL12P52815 198 aaKnown RBP15.65■□□□□ 0.1
LINC00173-201ENST00000470091 RAB30Q15771 203 aa15.65■□□□□ 0.1
LINC00173-201ENST00000470091 CDC37Q16543 378 aaPredicted RBP15.65■□□□□ 0.1
LINC00173-201ENST00000470091 RTN1Q16799 776 aa15.65■□□□□ 0.1
LINC00173-201ENST00000470091 CCDC178Q5BJE1 867 aa15.65■□□□□ 0.1
LINC00173-201ENST00000470091 FOXD4L5Q5VV16 416 aaPredicted RBP15.65■□□□□ 0.1
LINC00173-201ENST00000470091 SEPT14Q6ZU15 432 aa15.65■□□□□ 0.1
LINC00173-201ENST00000470091 CATIPQ7Z7H3 387 aa15.65■□□□□ 0.1
LINC00173-201ENST00000470091 DNERQ8NFT8 737 aa15.65■□□□□ 0.1
LINC00173-201ENST00000470091 FOXD4L4Q8WXT5 416 aaPredicted RBP15.65■□□□□ 0.1
LINC00173-201ENST00000470091 TAAR1Q96RJ0 339 aa15.65■□□□□ 0.1
LINC00173-201ENST00000470091 SLC28A3Q9HAS3 691 aa15.65■□□□□ 0.1
LINC00173-201ENST00000470091 FAM217BQ9NTX9 383 aaPredicted RBP15.65■□□□□ 0.1
LINC00173-201ENST00000470091 YBX2Q9Y2T7 364 aaKnown RBP15.65■□□□□ 0.1
LINC00173-201ENST00000470091 ZDHHC9Q9Y397 364 aa15.65■□□□□ 0.1
LINC00173-201ENST00000470091 CPLX1O14810 134 aa15.64■□□□□ 0.09
LINC00173-201ENST00000470091 DDAH1O94760 285 aa15.64■□□□□ 0.09
LINC00173-201ENST00000470091 ARIH2O95376 493 aa15.64■□□□□ 0.09
LINC00173-201ENST00000470091 BRD1O95696 1058 aa15.64■□□□□ 0.09
LINC00173-201ENST00000470091 EDNRBP24530 442 aa15.64■□□□□ 0.09
LINC00173-201ENST00000470091 ADD1P35611 737 aaKnown RBP15.64■□□□□ 0.09
LINC00173-201ENST00000470091 RCAN1P53805 252 aa15.64■□□□□ 0.09
LINC00173-201ENST00000470091 HMGN5P82970 282 aaKnown RBP15.64■□□□□ 0.09
LINC00173-201ENST00000470091 ADGRE1Q14246 886 aa15.64■□□□□ 0.09
LINC00173-201ENST00000470091 TTLL4Q14679 1199 aa15.64■□□□□ 0.09
LINC00173-201ENST00000470091 RGS22Q8NE09 1264 aa15.64■□□□□ 0.09
LINC00173-201ENST00000470091 TNPO1Q92973 898 aaKnown RBP15.64■□□□□ 0.09
LINC00173-201ENST00000470091 VWCEQ96DN2 955 aa15.64■□□□□ 0.09
LINC00173-201ENST00000470091 A6NJR5 290 aa15.63■□□□□ 0.09
LINC00173-201ENST00000470091 NKRFO15226 690 aaKnown RBP eCLIP15.63■□□□□ 0.09
LINC00173-201ENST00000470091 PARP1P09874 1014 aaKnown RBP15.63■□□□□ 0.09
LINC00173-201ENST00000470091 SYT1P21579 422 aa15.63■□□□□ 0.09
LINC00173-201ENST00000470091 FOSBP53539 338 aa15.63■□□□□ 0.09
LINC00173-201ENST00000470091 LY6KQ17RY6 165 aa15.63■□□□□ 0.09
LINC00173-201ENST00000470091 QRICH1Q2TAL8 776 aa15.63■□□□□ 0.09
LINC00173-201ENST00000470091 SYTL5Q8TDW5 730 aaPredicted RBP15.63■□□□□ 0.09
LINC00173-201ENST00000470091 AFG1LQ8WV93 481 aa15.63■□□□□ 0.09
LINC00173-201ENST00000470091 ANKS1AQ92625 1134 aa15.63■□□□□ 0.09
LINC00173-201ENST00000470091 COL20A1Q9P218 1284 aa15.63■□□□□ 0.09
LINC00173-201ENST00000470091 NOD1Q9Y239 953 aa15.63■□□□□ 0.09
LINC00173-201ENST00000470091 ABCB11O95342 1321 aa15.63■□□□□ 0.09
LINC00173-201ENST00000470091 LRRC37A2A6NM11 1700 aa15.63■□□□□ 0.09
LINC00173-201ENST00000470091 VPS37CA5D8V6 355 aaPredicted RBP15.62■□□□□ 0.09
LINC00173-201ENST00000470091 STX6O43752 255 aa15.62■□□□□ 0.09
LINC00173-201ENST00000470091 KPNA6O60684 536 aa15.62■□□□□ 0.09
LINC00173-201ENST00000470091 TROAPQ12815 778 aa15.62■□□□□ 0.09
LINC00173-201ENST00000470091 ASPRV1Q53RT3 343 aa15.62■□□□□ 0.09
LINC00173-201ENST00000470091 FBXO11Q86XK2 927 aa15.62■□□□□ 0.09
LINC00173-201ENST00000470091 FAM184AQ8NB25 1140 aa15.62■□□□□ 0.09
LINC00173-201ENST00000470091 RETREG2Q8NC44 543 aa15.62■□□□□ 0.09
LINC00173-201ENST00000470091 NSUN6Q8TEA1 469 aaKnown RBP15.62■□□□□ 0.09
LINC00173-201ENST00000470091 RMDN3Q96TC7 470 aa15.62■□□□□ 0.09
LINC00173-201ENST00000470091 FTOQ9C0B1 505 aaKnown RBP eCLIP15.62■□□□□ 0.09
LINC00173-201ENST00000470091 JMJD4Q9H9V9 463 aa15.62■□□□□ 0.09
LINC00173-201ENST00000470091 CDKL5O76039 1030 aa15.61■□□□□ 0.09
LINC00173-201ENST00000470091 CALM1P0DP23 149 aa15.61■□□□□ 0.09
LINC00173-201ENST00000470091 CALM2P0DP24 149 aa15.61■□□□□ 0.09
LINC00173-201ENST00000470091 CALM3P0DP25 149 aa15.61■□□□□ 0.09
LINC00173-201ENST00000470091 FDPSP14324 419 aaKnown RBP15.61■□□□□ 0.09
LINC00173-201ENST00000470091 ATP2A2P16615 1042 aaKnown RBP15.61■□□□□ 0.09
LINC00173-201ENST00000470091 EIF2AK2P19525 551 aaKnown RBP15.61■□□□□ 0.09
LINC00173-201ENST00000470091 STXBP2Q15833 593 aa15.61■□□□□ 0.09
LINC00173-201ENST00000470091 NTRK3Q16288 839 aa15.61■□□□□ 0.09
LINC00173-201ENST00000470091 ARHGEF16Q5VV41 709 aa15.61■□□□□ 0.09
LINC00173-201ENST00000470091 LARP1BQ659C4 914 aaKnown RBP15.61■□□□□ 0.09
LINC00173-201ENST00000470091 NFRKBQ6P4R8 1299 aa15.61■□□□□ 0.09
LINC00173-201ENST00000470091 CCDC62Q6P9F0 684 aa15.61■□□□□ 0.09
LINC00173-201ENST00000470091 CPLX2Q6PUV4 134 aaKnown RBP15.61■□□□□ 0.09
LINC00173-201ENST00000470091 MCF2L2Q86YR7 1114 aa15.61■□□□□ 0.09
LINC00173-201ENST00000470091 STAG2Q8N3U4 1231 aa15.61■□□□□ 0.09
LINC00173-201ENST00000470091 FANCBQ8NB91 859 aa15.61■□□□□ 0.09
LINC00173-201ENST00000470091 PHKBQ93100 1093 aa15.61■□□□□ 0.09
LINC00173-201ENST00000470091 ORC3Q9UBD5 711 aaPredicted RBP15.61■□□□□ 0.09
LINC00173-201ENST00000470091 MTMR6Q9Y217 621 aa15.61■□□□□ 0.09
LINC00173-201ENST00000470091 MRPL11Q9Y3B7 192 aaKnown RBP15.61■□□□□ 0.09
LINC00173-201ENST00000470091 REV3LO60673 3130 aa15.6■□□□□ 0.09
LINC00173-201ENST00000470091 PLEKHA8P1O95397 391 aa15.6■□□□□ 0.09
LINC00173-201ENST00000470091 CFBP00751 764 aa15.6■□□□□ 0.09
LINC00173-201ENST00000470091 ZSCAN22P10073 491 aaPredicted RBP15.6■□□□□ 0.09
LINC00173-201ENST00000470091 PDCP20941 246 aa15.6■□□□□ 0.09
LINC00173-201ENST00000470091 PPP2R2DQ66LE6 453 aa15.6■□□□□ 0.09
LINC00173-201ENST00000470091 MICALL1Q8N3F8 863 aa15.6■□□□□ 0.09
LINC00173-201ENST00000470091 SYMPKQ92797 1274 aaKnown RBP15.6■□□□□ 0.09
LINC00173-201ENST00000470091 CERS4Q9HA82 394 aa15.6■□□□□ 0.09
LINC00173-201ENST00000470091 KIF3AQ9Y496 699 aa15.6■□□□□ 0.09
LINC00173-201ENST00000470091 TRANK1O15050 2925 aa15.6■□□□□ 0.09
LINC00173-201ENST00000470091 CCDC196A0A1B0GTZ2 297 aa15.59■□□□□ 0.09
LINC00173-201ENST00000470091 RFXAPO00287 272 aa15.59■□□□□ 0.09
LINC00173-201ENST00000470091 SORBS3O60504 671 aa15.59■□□□□ 0.09
LINC00173-201ENST00000470091 GH1P01241 217 aa15.59■□□□□ 0.09
LINC00173-201ENST00000470091 IQCF3P0C7M6 154 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms