RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 KIF20AO95235 890 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 FAM86B2P0C5J1 330 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 BCRP11274 1271 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 ATP1A3P13637 1013 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 CD44P16070 742 aaKnown RBP10.44□□□□□ -0.74
SMC1A-205ENST00000469129 TAL1P17542 331 aaPredicted RBP10.44□□□□□ -0.74
SMC1A-205ENST00000469129 PTGS1P23219 599 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 DSG3P32926 999 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 HMGCS2P54868 508 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 SPIRE1Q08AE8 756 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 MCM6Q14566 821 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 CEP55Q53EZ4 464 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 LRCH2Q5VUJ6 765 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 CDKAL1Q5VV42 579 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 XRRA1Q6P2D8 792 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 FAM114A1Q8IWE2 563 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 CPXCR1Q8N123 301 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 ADSSL1Q8N142 457 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 SLC5A5Q92911 643 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 ATG4CQ96DT6 458 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 AGBL1Q96MI9 1066 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 P2RX7Q99572 595 aaKnown RBP10.44□□□□□ -0.74
SMC1A-205ENST00000469129 POLR3CQ9BUI4 534 aaPredicted RBP10.44□□□□□ -0.74
SMC1A-205ENST00000469129 TEKT3Q9BXF9 490 aa10.44□□□□□ -0.74
SMC1A-205ENST00000469129 RAVER2Q9HCJ3 691 aaKnown RBP10.44□□□□□ -0.74
SMC1A-205ENST00000469129 RRAGDQ9NQL2 400 aaPredicted RBP10.44□□□□□ -0.74
SMC1A-205ENST00000469129 DOCK5Q9H7D0 1870 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 POTEB3A0JP26 581 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 POTECB2RU33 542 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 NFIBO00712 420 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 GAS7O60861 476 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 USP2O75604 605 aaPredicted RBP10.43□□□□□ -0.74
SMC1A-205ENST00000469129 TPM2P07951 284 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 RPA1P27694 616 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 EPHX2P34913 555 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 PPP2R5CQ13362 524 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 VGLL4Q14135 290 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 COG2Q14746 738 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 PCNX4Q63HM2 1172 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 POTEBQ6S5H4 581 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 TMC6Q7Z403 805 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 VSTM4Q8IW00 320 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 CCDC65Q8IXS2 484 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 SMYD4Q8IYR2 804 aaPredicted RBP10.43□□□□□ -0.74
SMC1A-205ENST00000469129 LRRC15Q8TF66 581 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 CLEC4DQ8WXI8 215 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 TRERF1Q96PN7 1200 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 RIT2Q99578 217 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 MXRA8Q9BRK3 442 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 THAP9Q9H5L6 903 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 TUFT1Q9NNX1 390 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 RNF146Q9NTX7 359 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.43□□□□□ -0.74
SMC1A-205ENST00000469129 TCEAL9Q9UHQ7 104 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 VAV3Q9UKW4 847 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 GDAQ9Y2T3 454 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 AFG3L2Q9Y4W6 797 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 SNCAIPQ9Y6H5 919 aa10.43□□□□□ -0.74
SMC1A-205ENST00000469129 MYH9P35579 1960 aaKnown RBP10.43□□□□□ -0.74
SMC1A-205ENST00000469129 MYMKA6NI61 221 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 ADM5C9JUS6 153 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 PSMD10O75832 226 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 KRT18P05783 430 aaKnown RBP10.42□□□□□ -0.74
SMC1A-205ENST00000469129 SFPQP23246 707 aaKnown RBP eCLIP10.42□□□□□ -0.74
SMC1A-205ENST00000469129 CCNE1P24864 410 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 EEF1GP26641 437 aaKnown RBP10.42□□□□□ -0.74
SMC1A-205ENST00000469129 PRCPP42785 496 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 STX17P56962 302 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 PRAMEF18Q5VWM3 479 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 SNRNP48Q6IEG0 339 aaKnown RBP10.42□□□□□ -0.74
SMC1A-205ENST00000469129 FOXR2Q6PJQ5 311 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.42□□□□□ -0.74
SMC1A-205ENST00000469129 RNF207Q6ZRF8 634 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 CATSPERGQ6ZRH7 1159 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 FILIP1Q7Z7B0 1213 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 PNMA8AQ86V59 439 aaPredicted RBP10.42□□□□□ -0.74
SMC1A-205ENST00000469129 ANKRD13AQ8IZ07 590 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 MB21D1Q8N884 522 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 PROCA1Q8NCQ7 364 aaPredicted RBP10.42□□□□□ -0.74
SMC1A-205ENST00000469129 CCDC112Q8NEF3 446 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 P2RX5Q93086 422 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 CDCA5Q96FF9 252 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 TRIM47Q96LD4 638 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 ZNF577Q9BSK1 485 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 TEX13BQ9BXU2 312 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 KCNF1Q9H3M0 494 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 ACAD9Q9H845 621 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 HOMER2Q9NSB8 354 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 HOXC10Q9NYD6 342 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 MAGEC2Q9UBF1 373 aaPredicted RBP10.42□□□□□ -0.74
SMC1A-205ENST00000469129 ADAMTS5Q9UNA0 930 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 KIAA1024Q9UPX6 916 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 DNM3Q9UQ16 869 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 TRPM7Q96QT4 1865 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 PLXNB2O15031 1838 aa10.42□□□□□ -0.74
SMC1A-205ENST00000469129 PLXNA1Q9UIW2 1896 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 A0A1B0GTH6 734 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 MEIS1O00470 390 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 MED24O75448 989 aa10.41□□□□□ -0.74
SMC1A-205ENST00000469129 FGFR1OPO95684 399 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms