RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 NECTIN1Q15223 517 aa17.12■□□□□ 0.33
SDCCAG3-209ENST00000468963 KIAA0753Q2KHM9 967 aa17.12■□□□□ 0.33
SDCCAG3-209ENST00000468963 ZNF654Q8IZM8 581 aa17.12■□□□□ 0.33
SDCCAG3-209ENST00000468963 AFAP1L1Q8TED9 768 aa17.12■□□□□ 0.33
SDCCAG3-209ENST00000468963 ESYT1Q9BSJ8 1104 aa17.12■□□□□ 0.33
SDCCAG3-209ENST00000468963 ALG1Q9BT22 464 aa17.12■□□□□ 0.33
SDCCAG3-209ENST00000468963 KATNAL1Q9BW62 490 aa17.12■□□□□ 0.33
SDCCAG3-209ENST00000468963 SPZ1Q9BXG8 430 aa17.12■□□□□ 0.33
SDCCAG3-209ENST00000468963 BCAS3Q9H6U6 928 aa17.12■□□□□ 0.33
SDCCAG3-209ENST00000468963 SLC27A2O14975 620 aa17.11■□□□□ 0.33
SDCCAG3-209ENST00000468963 PRC1O43663 620 aa17.11■□□□□ 0.33
SDCCAG3-209ENST00000468963 DDAH1O94760 285 aa17.11■□□□□ 0.33
SDCCAG3-209ENST00000468963 SELPP16109 830 aa17.11■□□□□ 0.33
SDCCAG3-209ENST00000468963 ICAM3P32942 547 aa17.11■□□□□ 0.33
SDCCAG3-209ENST00000468963 MCM5P33992 734 aa17.11■□□□□ 0.33
SDCCAG3-209ENST00000468963 HIC1Q14526 733 aa17.11■□□□□ 0.33
SDCCAG3-209ENST00000468963 TRIM71Q2Q1W2 868 aaKnown RBP17.11■□□□□ 0.33
SDCCAG3-209ENST00000468963 TMTC2Q8N394 836 aa17.11■□□□□ 0.33
SDCCAG3-209ENST00000468963 CCDC155Q8N6L0 562 aa17.11■□□□□ 0.33
SDCCAG3-209ENST00000468963 C7orf31Q8N865 590 aa17.11■□□□□ 0.33
SDCCAG3-209ENST00000468963 PIBF1Q8WXW3 757 aa17.11■□□□□ 0.33
SDCCAG3-209ENST00000468963 SPATA33Q96N06 139 aa17.11■□□□□ 0.33
SDCCAG3-209ENST00000468963 C16orf70Q9BSU1 422 aa17.11■□□□□ 0.33
SDCCAG3-209ENST00000468963 MYL10Q9BUA6 226 aa17.11■□□□□ 0.33
SDCCAG3-209ENST00000468963 FTOQ9C0B1 505 aaKnown RBP eCLIP17.11■□□□□ 0.33
SDCCAG3-209ENST00000468963 FRMPD4Q14CM0 1322 aa17.11■□□□□ 0.33
SDCCAG3-209ENST00000468963 REV3LO60673 3130 aa17.11■□□□□ 0.33
SDCCAG3-209ENST00000468963 SPATA31C2B4DYI2 1134 aa17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 SH2B2O14492 632 aaPredicted RBP17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 SORBS3O60504 671 aa17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 CXCL10P02778 98 aa17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 ZNF286BP0CG31 522 aa17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 CKBP12277 381 aa17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 UBA1P22314 1058 aaKnown RBP17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 KIF5BP33176 963 aa17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 LIFRP42702 1097 aa17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 ZNF200P98182 395 aaPredicted RBP17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 PTK7Q13308 1070 aa17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 TRAF7Q6Q0C0 670 aa17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 CASC1Q6TDU7 716 aa17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 SRBD1Q8N5C6 995 aaKnown RBP17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 CTCFLQ8NI51 663 aaPredicted RBP17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 TMEM87BQ96K49 555 aa17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 INPP4AQ96PE3 977 aaPredicted RBP17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 SLC9A7Q96T83 725 aa17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 LZTS2Q9BRK4 669 aa17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 PRDM6Q9NQX0 595 aa17.1■□□□□ 0.33
SDCCAG3-209ENST00000468963 PIK3CDO00329 1044 aa17.09■□□□□ 0.33
SDCCAG3-209ENST00000468963 MEIS2O14770 477 aa17.09■□□□□ 0.33
SDCCAG3-209ENST00000468963 NBNO60934 754 aa17.09■□□□□ 0.33
SDCCAG3-209ENST00000468963 STAM2O75886 525 aa17.09■□□□□ 0.33
SDCCAG3-209ENST00000468963 BAIAP3O94812 1187 aa17.09■□□□□ 0.33
SDCCAG3-209ENST00000468963 PARNO95453 639 aaKnown RBP17.09■□□□□ 0.33
SDCCAG3-209ENST00000468963 GNAQP50148 359 aa17.09■□□□□ 0.33
SDCCAG3-209ENST00000468963 SEMA3FQ13275 785 aa17.09■□□□□ 0.33
SDCCAG3-209ENST00000468963 PPP2R2DQ66LE6 453 aa17.09■□□□□ 0.33
SDCCAG3-209ENST00000468963 CREB3L3Q68CJ9 461 aa17.09■□□□□ 0.33
SDCCAG3-209ENST00000468963 LRRC8DQ7L1W4 858 aa17.09■□□□□ 0.33
SDCCAG3-209ENST00000468963 WNT8BQ93098 351 aa17.09■□□□□ 0.33
SDCCAG3-209ENST00000468963 RRP36Q96EU6 259 aaKnown RBP17.09■□□□□ 0.33
SDCCAG3-209ENST00000468963 MLXIPQ9HAP2 919 aa17.09■□□□□ 0.33
SDCCAG3-209ENST00000468963 NCOR1O75376 2440 aa17.08■□□□□ 0.33
SDCCAG3-209ENST00000468963 PLEKHA8P1O95397 391 aa17.08■□□□□ 0.32
SDCCAG3-209ENST00000468963 IGFBP4P22692 258 aa17.08■□□□□ 0.32
SDCCAG3-209ENST00000468963 USP17L6PQ6QN14 398 aa17.08■□□□□ 0.32
SDCCAG3-209ENST00000468963 HERC6Q8IVU3 1022 aa17.08■□□□□ 0.32
SDCCAG3-209ENST00000468963 PPM1EQ8WY54 764 aa17.08■□□□□ 0.32
SDCCAG3-209ENST00000468963 RTEL1Q9NZ71 1219 aa17.08■□□□□ 0.32
SDCCAG3-209ENST00000468963 CA3P07451 260 aa17.07■□□□□ 0.32
SDCCAG3-209ENST00000468963 POU3F3P20264 500 aaPredicted RBP17.07■□□□□ 0.32
SDCCAG3-209ENST00000468963 HOXC8P31273 242 aa17.07■□□□□ 0.32
SDCCAG3-209ENST00000468963 TCTN1Q2MV58 587 aa17.07■□□□□ 0.32
SDCCAG3-209ENST00000468963 GNPTABQ3T906 1256 aa17.07■□□□□ 0.32
SDCCAG3-209ENST00000468963 ZNF618Q5T7W0 954 aa17.07■□□□□ 0.32
SDCCAG3-209ENST00000468963 NFXL1Q6ZNB6 911 aa17.07■□□□□ 0.32
SDCCAG3-209ENST00000468963 CMTR1Q8N1G2 835 aaKnown RBP17.07■□□□□ 0.32
SDCCAG3-209ENST00000468963 PRRC2BQ5JSZ5 2229 aaKnown RBP17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 TANC1Q9C0D5 1861 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 MUC3AQ02505 3323 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 CCDC69A6NI79 296 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 KIF28PB7ZC32 967 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 H3BRB1 525 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 ARHGEF15O94989 841 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 CALM1P0DP23 149 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 CALM2P0DP24 149 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 CALM3P0DP25 149 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 RXRAP19793 462 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 TAP1Q03518 808 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 NEDD9Q14511 834 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 MBTPS1Q14703 1052 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 CCDC85BQ15834 202 aaPredicted RBP17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 BMP2KLQ5H9B9 411 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 PCNX4Q63HM2 1172 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 XRRA1Q6P2D8 792 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 CNKSR3Q6P9H4 555 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 METTL7BQ6UX53 244 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 CYFIP1Q7L576 1253 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 SERINC5Q86VE9 423 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 SKAP1Q86WV1 359 aa17.06■□□□□ 0.32
SDCCAG3-209ENST00000468963 SMARCC2Q8TAQ2 1214 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms