RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 MSL3Q8N5Y2 521 aaKnown RBP9.2□□□□□ -0.94
HDAC6-216ENST00000468949 PXYLP1Q8TE99 480 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 TNPO1Q92973 898 aaKnown RBP9.2□□□□□ -0.94
HDAC6-216ENST00000468949 MAML3Q96JK9 1138 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 SPATA32Q96LK8 384 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 PURBQ96QR8 312 aaKnown RBP9.2□□□□□ -0.94
HDAC6-216ENST00000468949 RAB34Q9BZG1 259 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 SCAND2PQ9GZW5 306 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-216ENST00000468949 RTEL1Q9NZ71 1219 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 ZHX1Q9UKY1 873 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-216ENST00000468949 GABRQQ9UN88 632 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 TRPC6Q9Y210 931 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 ZDHHC9Q9Y397 364 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 SYNGAP1Q96PV0 1343 aa9.2□□□□□ -0.94
HDAC6-216ENST00000468949 SOWAHBA6NEL2 793 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 LAD1O00515 517 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 ADAMTS3O15072 1205 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 ADCY3O60266 1144 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 EIF3JO75822 258 aaKnown RBP9.19□□□□□ -0.94
HDAC6-216ENST00000468949 TDP2O95551 362 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 YEATS4O95619 227 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 CYP3A4P08684 503 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 OR52Z1P0C646 297 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 ME1P48163 572 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 NBR1Q14596 966 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 OLFML2BQ68BL8 750 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 PPP4R3AQ6IN85 833 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 SEPT14Q6ZU15 432 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 EEPD1Q7L9B9 569 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 NIPA1Q7RTP0 329 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 FBXO16Q8IX29 292 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-216ENST00000468949 SLFN12Q8IYM2 578 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 IL31RAQ8NI17 732 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 KCNG4Q8TDN1 519 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 GPRASP2Q96D09 838 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 MXRA8Q9BRK3 442 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 SDF4Q9BRK5 362 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 ZNF577Q9BSK1 485 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 VTA1Q9NP79 307 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 POLR3EQ9NVU0 708 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-216ENST00000468949 PCDHB6Q9Y5E3 794 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 MRVI1Q9Y6F6 885 aa9.19□□□□□ -0.94
HDAC6-216ENST00000468949 POTEFA5A3E0 1075 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 GAS7O60861 476 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 MYCP01106 439 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-216ENST00000468949 HMGCRP04035 888 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 INHAP05111 366 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 HOXC6P09630 235 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 XRCC5P13010 732 aaKnown RBP9.18□□□□□ -0.94
HDAC6-216ENST00000468949 ELNP15502 786 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 EDNRBP24530 442 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 CIITAP33076 1130 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 TXLNAP40222 546 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 TTLL4Q14679 1199 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 Q4G0T1 1027 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 KCNV1Q6PIU1 500 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 VSIG10LQ86VR7 867 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 RASSF8Q8NHQ8 419 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 NPLOC4Q8TAT6 608 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 USP28Q96RU2 1077 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 TINF2Q9BSI4 451 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 JADE2Q9NQC1 790 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.18□□□□□ -0.94
HDAC6-216ENST00000468949 RYDENQ9NUL5 291 aaKnown RBP9.18□□□□□ -0.94
HDAC6-216ENST00000468949 PKD2L1Q9P0L9 805 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 TFIP11Q9UBB9 837 aaKnown RBP9.18□□□□□ -0.94
HDAC6-216ENST00000468949 CLIC4Q9Y696 253 aa9.18□□□□□ -0.94
HDAC6-216ENST00000468949 FAM86B1E9PN63 330 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 TBX3O15119 743 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 SPTLC2O15270 562 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 MAFGO15525 162 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 SLC37A4O43826 429 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 FAM86B2P0C5J1 330 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 CCL5P13501 91 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 NASPP49321 788 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-216ENST00000468949 TOB1P50616 345 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-216ENST00000468949 ATP2C1P98194 919 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-216ENST00000468949 PTGDRQ13258 359 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 TPRNQ4KMQ1 711 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 LRCH2Q5VUJ6 765 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 MAMDC4Q6UXC1 1216 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 DTHD1Q6ZMT9 781 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 EFCAB3Q8N7B9 438 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 KRI1Q8N9T8 703 aaKnown RBP9.17□□□□□ -0.94
HDAC6-216ENST00000468949 GIMAP8Q8ND71 665 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-216ENST00000468949 SCFD2Q8WU76 684 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 FERMT2Q96AC1 680 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 FAM20AQ96MK3 541 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 INPP4AQ96PE3 977 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-216ENST00000468949 TEKT3Q9BXF9 490 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 WDR11Q9BZH6 1224 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 FTOQ9C0B1 505 aaKnown RBP eCLIP9.17□□□□□ -0.94
HDAC6-216ENST00000468949 ABHD16BQ9H3Z7 469 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 UBIAD1Q9Y5Z9 338 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 FRMPD3Q5JV73 1810 aa9.17□□□□□ -0.94
HDAC6-216ENST00000468949 ASTN1O14525 1302 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 CYP3A7-CYP3A51PA0A087WV96 503 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 VWA3AA6NCI4 1184 aa9.16□□□□□ -0.94
HDAC6-216ENST00000468949 DDX39AO00148 427 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms