RNA–Protein interactions for RNA: ENST00000463601.1

TSC2-209, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-209ENST00000463601 MSRAQ9UJ68 235 aa22.28■■□□□ 1.16
TSC2-209ENST00000463601 PITPNM1O00562 1244 aa22.27■■□□□ 1.16
TSC2-209ENST00000463601 DDAH1O94760 285 aa22.27■■□□□ 1.16
TSC2-209ENST00000463601 RXRAP19793 462 aa22.27■■□□□ 1.16
TSC2-209ENST00000463601 PSEN2P49810 448 aa22.27■■□□□ 1.16
TSC2-209ENST00000463601 MYSM1Q5VVJ2 828 aa22.27■■□□□ 1.16
TSC2-209ENST00000463601 DHX32Q7L7V1 743 aaKnown RBP22.27■■□□□ 1.16
TSC2-209ENST00000463601 SESTD1Q86VW0 696 aa22.27■■□□□ 1.16
TSC2-209ENST00000463601 RAB11FIP4Q86YS3 637 aa22.27■■□□□ 1.16
TSC2-209ENST00000463601 SAMD3Q8N6K7 520 aa22.27■■□□□ 1.16
TSC2-209ENST00000463601 RETREG2Q8NC44 543 aa22.27■■□□□ 1.16
TSC2-209ENST00000463601 PPTC7Q8NI37 304 aa22.27■■□□□ 1.16
TSC2-209ENST00000463601 DHX38Q92620 1227 aaKnown RBP22.27■■□□□ 1.16
TSC2-209ENST00000463601 MAP3K14Q99558 947 aa22.27■■□□□ 1.16
TSC2-209ENST00000463601 COL25A1Q9BXS0 654 aaPredicted RBP22.27■■□□□ 1.16
TSC2-209ENST00000463601 HDAC6Q9UBN7 1215 aa22.27■■□□□ 1.16
TSC2-209ENST00000463601 SNX14Q9Y5W7 946 aa22.27■■□□□ 1.16
TSC2-209ENST00000463601 SPTBN5Q9NRC6 3674 aaKnown RBP22.26■■□□□ 1.15
TSC2-209ENST00000463601 PTPRSQ13332 1948 aa22.26■■□□□ 1.15
TSC2-209ENST00000463601 PLEKHA8P1O95397 391 aa22.26■■□□□ 1.15
TSC2-209ENST00000463601 GGPS1O95749 300 aa22.26■■□□□ 1.15
TSC2-209ENST00000463601 UBA1P22314 1058 aaKnown RBP22.26■■□□□ 1.15
TSC2-209ENST00000463601 CCND2P30279 289 aa22.26■■□□□ 1.15
TSC2-209ENST00000463601 TRAF1Q13077 416 aa22.26■■□□□ 1.15
TSC2-209ENST00000463601 HSDL1Q3SXM5 330 aa22.26■■□□□ 1.15
TSC2-209ENST00000463601 CELF3Q5SZQ8 465 aaKnown RBP22.26■■□□□ 1.15
TSC2-209ENST00000463601 SGMS1Q86VZ5 419 aa22.26■■□□□ 1.15
TSC2-209ENST00000463601 CMTR1Q8N1G2 835 aaKnown RBP22.26■■□□□ 1.15
TSC2-209ENST00000463601 USP26Q9BXU7 913 aa22.26■■□□□ 1.15
TSC2-209ENST00000463601 HAS3O00219 553 aa22.25■■□□□ 1.15
TSC2-209ENST00000463601 F2P00734 622 aa22.25■■□□□ 1.15
TSC2-209ENST00000463601 PFKMP08237 780 aa22.25■■□□□ 1.15
TSC2-209ENST00000463601 HMGB1P09429 215 aaKnown RBP22.25■■□□□ 1.15
TSC2-209ENST00000463601 HOXD8P13378 290 aaPredicted RBP22.25■■□□□ 1.15
TSC2-209ENST00000463601 MRPS9P82933 396 aaKnown RBP22.25■■□□□ 1.15
TSC2-209ENST00000463601 BFSP2Q13515 415 aa22.25■■□□□ 1.15
TSC2-209ENST00000463601 ADGRE1Q14246 886 aa22.25■■□□□ 1.15
TSC2-209ENST00000463601 MFSD10Q14728 455 aa22.25■■□□□ 1.15
TSC2-209ENST00000463601 GPNMBQ14956 572 aa22.25■■□□□ 1.15
TSC2-209ENST00000463601 NFXL1Q6ZNB6 911 aa22.25■■□□□ 1.15
TSC2-209ENST00000463601 SRBD1Q8N5C6 995 aaKnown RBP22.25■■□□□ 1.15
TSC2-209ENST00000463601 CTCFLQ8NI51 663 aaPredicted RBP22.25■■□□□ 1.15
TSC2-209ENST00000463601 SPATA33Q96N06 139 aa22.25■■□□□ 1.15
TSC2-209ENST00000463601 SPZ1Q9BXG8 430 aa22.25■■□□□ 1.15
TSC2-209ENST00000463601 GTF2IRD1Q9UHL9 959 aa22.25■■□□□ 1.15
TSC2-209ENST00000463601 REV3LO60673 3130 aa22.24■■□□□ 1.15
TSC2-209ENST00000463601 CCDC69A6NI79 296 aa22.24■■□□□ 1.15
TSC2-209ENST00000463601 ATP2A2P16615 1042 aaKnown RBP22.24■■□□□ 1.15
TSC2-209ENST00000463601 RFC2P35250 354 aa22.24■■□□□ 1.15
TSC2-209ENST00000463601 ZNF200P98182 395 aaPredicted RBP22.24■■□□□ 1.15
TSC2-209ENST00000463601 HIC1Q14526 733 aa22.24■■□□□ 1.15
TSC2-209ENST00000463601 KIAA0753Q2KHM9 967 aa22.24■■□□□ 1.15
TSC2-209ENST00000463601 USP17L6PQ6QN14 398 aa22.24■■□□□ 1.15
TSC2-209ENST00000463601 C7orf31Q8N865 590 aa22.24■■□□□ 1.15
TSC2-209ENST00000463601 TCEANC2Q96MN5 208 aa22.24■■□□□ 1.15
TSC2-209ENST00000463601 FTOQ9C0B1 505 aaKnown RBP eCLIP22.24■■□□□ 1.15
TSC2-209ENST00000463601 SLC28A3Q9HAS3 691 aa22.24■■□□□ 1.15
TSC2-209ENST00000463601 FRMPD4Q14CM0 1322 aa22.24■■□□□ 1.15
TSC2-209ENST00000463601 KCNV1Q6PIU1 500 aa22.23■■□□□ 1.15
TSC2-209ENST00000463601 WNT8BQ93098 351 aa22.23■■□□□ 1.15
TSC2-209ENST00000463601 RRP36Q96EU6 259 aaKnown RBP22.23■■□□□ 1.15
TSC2-209ENST00000463601 JAKMIP1Q96N16 626 aaKnown RBP22.23■■□□□ 1.15
TSC2-209ENST00000463601 RTEL1Q9NZ71 1219 aa22.23■■□□□ 1.15
TSC2-209ENST00000463601 hCG_1642624A0A1W2PR95 340 aa22.22■■□□□ 1.15
TSC2-209ENST00000463601 PPFIA4O75335 1185 aa22.22■■□□□ 1.15
TSC2-209ENST00000463601 CALM1P0DP23 149 aa22.22■■□□□ 1.15
TSC2-209ENST00000463601 CALM2P0DP24 149 aa22.22■■□□□ 1.15
TSC2-209ENST00000463601 CALM3P0DP25 149 aa22.22■■□□□ 1.15
TSC2-209ENST00000463601 KIF5BP33176 963 aa22.22■■□□□ 1.15
TSC2-209ENST00000463601 SEMA3FQ13275 785 aa22.22■■□□□ 1.15
TSC2-209ENST00000463601 CAGE1Q8TC20 777 aa22.22■■□□□ 1.15
TSC2-209ENST00000463601 AFAP1L1Q8TED9 768 aa22.22■■□□□ 1.15
TSC2-209ENST00000463601 PPM1EQ8WY54 764 aa22.22■■□□□ 1.15
TSC2-209ENST00000463601 GAS2L1Q99501 681 aaPredicted RBP22.22■■□□□ 1.15
TSC2-209ENST00000463601 KATNAL1Q9BW62 490 aa22.22■■□□□ 1.15
TSC2-209ENST00000463601 PRDM6Q9NQX0 595 aa22.22■■□□□ 1.15
TSC2-209ENST00000463601 TELO2Q9Y4R8 837 aa22.22■■□□□ 1.15
TSC2-209ENST00000463601 PCDHA11Q9Y5I1 949 aa22.22■■□□□ 1.15
TSC2-209ENST00000463601 SLC12A7Q9Y666 1083 aa22.22■■□□□ 1.15
TSC2-209ENST00000463601 TRANK1O15050 2925 aa22.21■■□□□ 1.15
TSC2-209ENST00000463601 MEIS2O14770 477 aa22.21■■□□□ 1.15
TSC2-209ENST00000463601 TGFB3P10600 412 aa22.21■■□□□ 1.15
TSC2-209ENST00000463601 ACTN1P12814 892 aa22.21■■□□□ 1.15
TSC2-209ENST00000463601 CPA1P15085 419 aa22.21■■□□□ 1.15
TSC2-209ENST00000463601 SELPP16109 830 aa22.21■■□□□ 1.15
TSC2-209ENST00000463601 SMARCA1P28370 1054 aa22.21■■□□□ 1.15
TSC2-209ENST00000463601 LRRC8DQ7L1W4 858 aa22.21■■□□□ 1.15
TSC2-209ENST00000463601 CCDC155Q8N6L0 562 aa22.21■■□□□ 1.15
TSC2-209ENST00000463601 C16orf70Q9BSU1 422 aa22.21■■□□□ 1.15
TSC2-209ENST00000463601 MLXIPQ9HAP2 919 aa22.21■■□□□ 1.15
TSC2-209ENST00000463601 CKBP12277 381 aa22.2■■□□□ 1.14
TSC2-209ENST00000463601 TCTN1Q2MV58 587 aa22.2■■□□□ 1.14
TSC2-209ENST00000463601 TRIM71Q2Q1W2 868 aaKnown RBP22.2■■□□□ 1.14
TSC2-209ENST00000463601 PPP2R2DQ66LE6 453 aa22.2■■□□□ 1.14
TSC2-209ENST00000463601 TRAF7Q6Q0C0 670 aa22.2■■□□□ 1.14
TSC2-209ENST00000463601 APOA5Q6Q788 366 aa22.2■■□□□ 1.14
TSC2-209ENST00000463601 BLOC1S2Q6QNY1 142 aa22.2■■□□□ 1.14
TSC2-209ENST00000463601 SMARCC2Q8TAQ2 1214 aa22.2■■□□□ 1.14
TSC2-209ENST00000463601 INPP4AQ96PE3 977 aaPredicted RBP22.2■■□□□ 1.14
TSC2-209ENST00000463601 LZTS2Q9BRK4 669 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms