RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 JPH1Q9HDC5 661 aaPredicted RBP10.37□□□□□ -0.75
DDX39B-215ENST00000462256 SH3GLB2Q9NR46 395 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 WBP1LQ9NX94 342 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 RPTORQ8N122 1335 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 MAFGO15525 162 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 STAM2O75886 525 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 CABYRO75952 493 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 SEC24BO95487 1268 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 SHROOM1Q2M3G4 852 aaPredicted RBP10.36□□□□□ -0.75
DDX39B-215ENST00000462256 SNX21Q969T3 373 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.36□□□□□ -0.75
DDX39B-215ENST00000462256 TJP1Q07157 1748 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 CSPG5O95196 566 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 STAT5BP51692 787 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 FAM102BQ5T8I3 360 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 NOSTRINQ8IVI9 506 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 CEP89Q96ST8 783 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 NT5C3AQ9H0P0 336 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 CIZ1Q9ULV3 898 aaPredicted RBP10.36□□□□□ -0.75
DDX39B-215ENST00000462256 SPTLC2O15270 562 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 PHACTR2O75167 634 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 FSCN1Q16658 493 aaKnown RBP10.36□□□□□ -0.75
DDX39B-215ENST00000462256 TRIM44Q96DX7 344 aaPredicted RBP10.36□□□□□ -0.75
DDX39B-215ENST00000462256 PPP1R12CQ9BZL4 782 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 ZNF302Q9NR11 478 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 IL17RBQ9NRM6 502 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 TPM1P09493 284 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 CTSHP09668 335 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 CCL5P13501 91 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 TECP42680 631 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 FSIP1Q8NA03 581 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 ZNF384Q8TF68 577 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 RPS6KC1Q96S38 1066 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 MTG1Q9BT17 334 aaPredicted RBP10.36□□□□□ -0.75
DDX39B-215ENST00000462256 MCOLN1Q9GZU1 580 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 RIC8AQ9NPQ8 531 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 EXOC1Q9NV70 894 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 RBPJLQ9UBG7 517 aa10.36□□□□□ -0.75
DDX39B-215ENST00000462256 DENND3A2RUS2 1198 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 PHF20L1A8MW92 1017 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 OFD1O75665 1012 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 TROAPQ12815 778 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 PPP2R5AQ15172 486 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 GJC2Q5T442 439 aaPredicted RBP10.35□□□□□ -0.75
DDX39B-215ENST00000462256 SWSAP1Q6NVH7 229 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 SV2BQ7L1I2 683 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 SYTL5Q8TDW5 730 aaPredicted RBP10.35□□□□□ -0.75
DDX39B-215ENST00000462256 PPP2R3CQ969Q6 453 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 ZIC5Q96T25 663 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 PPP1R16BQ96T49 567 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 UBR3Q6ZT12 1888 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 CHD4Q14839 1912 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 TPM3P06753 285 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 SFNP31947 248 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 CATSPER4Q7RTX7 472 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 AFG1LQ8WV93 481 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 INTS4Q96HW7 963 aaKnown RBP10.35□□□□□ -0.75
DDX39B-215ENST00000462256 DNAJC18Q9H819 358 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 DISC1Q9NRI5 854 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 LAMB4A4D0S4 1761 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 AFDNP55196 1824 aaKnown RBP10.35□□□□□ -0.75
DDX39B-215ENST00000462256 ADCYAP1R1P41586 468 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 CCDC65Q8IXS2 484 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 IQUBQ8NA54 791 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 FBXO18Q8NFZ0 1043 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 TTC12Q9H892 705 aaPredicted RBP10.35□□□□□ -0.75
DDX39B-215ENST00000462256 DACH1Q9UI36 760 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 PCDHA10Q9Y5I2 948 aa10.35□□□□□ -0.75
DDX39B-215ENST00000462256 SMIM22K7EJ46 135 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 PRPF40AO75400 957 aaKnown RBP10.34□□□□□ -0.75
DDX39B-215ENST00000462256 ZSCAN22P10073 491 aaPredicted RBP10.34□□□□□ -0.75
DDX39B-215ENST00000462256 ALDH5A1P51649 535 aaPredicted RBP10.34□□□□□ -0.75
DDX39B-215ENST00000462256 TSGA10IPQ3SY00 556 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 KANK3Q6NY19 840 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 FAM117BQ6P1L5 589 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 LRP5O75197 1615 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 TNS1Q9HBL0 1735 aaKnown RBP10.34□□□□□ -0.75
DDX39B-215ENST00000462256 SBF2Q86WG5 1849 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 USO1O60763 962 aaKnown RBP10.34□□□□□ -0.75
DDX39B-215ENST00000462256 TRAPPC10P48553 1259 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 CETN1Q12798 172 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 CCDC144BQ3MJ40 725 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 IER5Q5VY09 327 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 KIAA1841Q6NSI8 718 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 ABRAQ8N0Z2 381 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 NLRP4Q96MN2 994 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 ZSWIM4Q9H7M6 989 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 ERAP1Q9NZ08 941 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 BTBD7Q9P203 1132 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 LARSQ9P2J5 1176 aaKnown RBP10.34□□□□□ -0.75
DDX39B-215ENST00000462256 GABBR1Q9UBS5 961 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 KDM3AQ9Y4C1 1321 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 TGFB3P10600 412 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 CXCL17Q6UXB2 119 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 DHX58Q96C10 678 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 FAM20AQ96MK3 541 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 PDCD2LQ9BRP1 358 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 NAT10Q9H0A0 1025 aaKnown RBP10.34□□□□□ -0.75
DDX39B-215ENST00000462256 TMEM260Q9NX78 707 aa10.34□□□□□ -0.75
DDX39B-215ENST00000462256 AFMP43652 599 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms