RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 MBOAT7Q96N66 472 aa11.54□□□□□ -0.56
UPF2-204ENST00000460569 ZNF396Q96N95 335 aaPredicted RBP11.54□□□□□ -0.56
UPF2-204ENST00000460569 FTOQ9C0B1 505 aaKnown RBP eCLIP11.54□□□□□ -0.56
UPF2-204ENST00000460569 PDGFCQ9NRA1 345 aa11.54□□□□□ -0.56
UPF2-204ENST00000460569 PKD2L1Q9P0L9 805 aa11.54□□□□□ -0.56
UPF2-204ENST00000460569 PCDHB6Q9Y5E3 794 aa11.54□□□□□ -0.56
UPF2-204ENST00000460569 TCHHQ07283 1943 aa11.54□□□□□ -0.56
UPF2-204ENST00000460569 MEIS1O00470 390 aa11.53□□□□□ -0.56
UPF2-204ENST00000460569 ZNF865P0CJ78 1059 aaPredicted RBP11.53□□□□□ -0.56
UPF2-204ENST00000460569 ARP10275 920 aa11.53□□□□□ -0.56
UPF2-204ENST00000460569 CNGA1P29973 690 aa11.53□□□□□ -0.56
UPF2-204ENST00000460569 ADCYAP1R1P41586 468 aa11.53□□□□□ -0.56
UPF2-204ENST00000460569 CEBPZQ03701 1054 aaKnown RBP11.53□□□□□ -0.56
UPF2-204ENST00000460569 DNM1Q05193 864 aaKnown RBP11.53□□□□□ -0.56
UPF2-204ENST00000460569 SEMA3FQ13275 785 aa11.53□□□□□ -0.56
UPF2-204ENST00000460569 TTLL4Q14679 1199 aa11.53□□□□□ -0.56
UPF2-204ENST00000460569 PKN2Q16513 984 aaKnown RBP11.53□□□□□ -0.56
UPF2-204ENST00000460569 CALCRLQ16602 461 aa11.53□□□□□ -0.56
UPF2-204ENST00000460569 CCDC144BQ3MJ40 725 aa11.53□□□□□ -0.56
UPF2-204ENST00000460569 TAPT1Q6NXT6 567 aa11.53□□□□□ -0.56
UPF2-204ENST00000460569 TRPV1Q8NER1 839 aa11.53□□□□□ -0.56
UPF2-204ENST00000460569 LENG9Q96B70 501 aa11.53□□□□□ -0.56
UPF2-204ENST00000460569 UIMC1Q96RL1 719 aa11.53□□□□□ -0.56
UPF2-204ENST00000460569 USP28Q96RU2 1077 aa11.53□□□□□ -0.56
UPF2-204ENST00000460569 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.53□□□□□ -0.56
UPF2-204ENST00000460569 KCNH7Q9NS40 1196 aa11.53□□□□□ -0.56
UPF2-204ENST00000460569 NRBP1Q9UHY1 535 aa11.53□□□□□ -0.56
UPF2-204ENST00000460569 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.52□□□□□ -0.57
UPF2-204ENST00000460569 SPATA31C2B4DYI2 1134 aa11.52□□□□□ -0.57
UPF2-204ENST00000460569 MSH4O15457 936 aa11.52□□□□□ -0.57
UPF2-204ENST00000460569 MARCH6O60337 910 aa11.52□□□□□ -0.57
UPF2-204ENST00000460569 ARIH2O95376 493 aa11.52□□□□□ -0.57
UPF2-204ENST00000460569 TXNP10599 105 aaKnown RBP11.52□□□□□ -0.57
UPF2-204ENST00000460569 AKR1A1P14550 325 aa11.52□□□□□ -0.57
UPF2-204ENST00000460569 NCLP19338 710 aaKnown RBP11.52□□□□□ -0.57
UPF2-204ENST00000460569 UBA1P22314 1058 aaKnown RBP11.52□□□□□ -0.57
UPF2-204ENST00000460569 CCND3P30281 292 aaPredicted RBP11.52□□□□□ -0.57
UPF2-204ENST00000460569 ICAM3P32942 547 aa11.52□□□□□ -0.57
UPF2-204ENST00000460569 KRT85P78386 507 aa11.52□□□□□ -0.57
UPF2-204ENST00000460569 SF3A1Q15459 793 aaKnown RBP11.52□□□□□ -0.57
UPF2-204ENST00000460569 MAP3K21Q5TCX8 1036 aa11.52□□□□□ -0.57
UPF2-204ENST00000460569 ANO1Q5XXA6 986 aa11.52□□□□□ -0.57
UPF2-204ENST00000460569 KCNV1Q6PIU1 500 aa11.52□□□□□ -0.57
UPF2-204ENST00000460569 ZNF577Q9BSK1 485 aa11.52□□□□□ -0.57
UPF2-204ENST00000460569 AGO4Q9HCK5 861 aaKnown RBP11.52□□□□□ -0.57
UPF2-204ENST00000460569 FAM184BQ9ULE4 1060 aa11.52□□□□□ -0.57
UPF2-204ENST00000460569 CEP131Q9UPN4 1083 aa11.52□□□□□ -0.57
UPF2-204ENST00000460569 CLIC4Q9Y696 253 aa11.52□□□□□ -0.57
UPF2-204ENST00000460569 RBM47A0AV96 593 aaKnown RBP11.51□□□□□ -0.57
UPF2-204ENST00000460569 DDX39AO00148 427 aaKnown RBP11.51□□□□□ -0.57
UPF2-204ENST00000460569 IPO5O00410 1097 aaKnown RBP11.51□□□□□ -0.57
UPF2-204ENST00000460569 MAFGO15525 162 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 SORBS3O60504 671 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 GAS7O60861 476 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 BAG4O95429 457 aaKnown RBP11.51□□□□□ -0.57
UPF2-204ENST00000460569 BMP15O95972 392 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 MYCP01106 439 aaPredicted RBP11.51□□□□□ -0.57
UPF2-204ENST00000460569 OR52Z1P0C646 297 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 KCNA2P16389 499 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 TNFAIP2Q03169 654 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 PTGDRQ13258 359 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 STK38Q15208 465 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 LY6KQ17RY6 165 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 GJC2Q5T442 439 aaPredicted RBP11.51□□□□□ -0.57
UPF2-204ENST00000460569 LRCH2Q5VUJ6 765 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 ATL3Q6DD88 541 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 CCDC62Q6P9F0 684 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 ETNPPLQ8TBG4 499 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 GJA10Q969M2 543 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 LENG1Q96BZ8 264 aaPredicted RBP11.51□□□□□ -0.57
UPF2-204ENST00000460569 CHAMP1Q96JM3 812 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 SDF4Q9BRK5 362 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 TMEM60Q9H2L4 133 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 KCNMB3Q9NPA1 279 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 POLR3EQ9NVU0 708 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 TFIP11Q9UBB9 837 aaKnown RBP11.51□□□□□ -0.57
UPF2-204ENST00000460569 TCEAL9Q9UHQ7 104 aa11.51□□□□□ -0.57
UPF2-204ENST00000460569 DDX41Q9UJV9 622 aaKnown RBP11.51□□□□□ -0.57
UPF2-204ENST00000460569 TBX3O15119 743 aa11.5□□□□□ -0.57
UPF2-204ENST00000460569 NKRFO15226 690 aaKnown RBP eCLIP11.5□□□□□ -0.57
UPF2-204ENST00000460569 SEPT4O43236 478 aa11.5□□□□□ -0.57
UPF2-204ENST00000460569 ADCY6O43306 1168 aa11.5□□□□□ -0.57
UPF2-204ENST00000460569 ATP9AO75110 1047 aa11.5□□□□□ -0.57
UPF2-204ENST00000460569 GGPS1O95749 300 aa11.5□□□□□ -0.57
UPF2-204ENST00000460569 TGFB3P10600 412 aa11.5□□□□□ -0.57
UPF2-204ENST00000460569 SMPD1P17405 629 aa11.5□□□□□ -0.57
UPF2-204ENST00000460569 PTGS1P23219 599 aa11.5□□□□□ -0.57
UPF2-204ENST00000460569 NASPP49321 788 aaPredicted RBP11.5□□□□□ -0.57
UPF2-204ENST00000460569 ATP2C1P98194 919 aaPredicted RBP11.5□□□□□ -0.57
UPF2-204ENST00000460569 SP2Q02086 613 aa11.5□□□□□ -0.57
UPF2-204ENST00000460569 ITGB3BPQ13352 177 aaPredicted RBP11.5□□□□□ -0.57
UPF2-204ENST00000460569 NEDD9Q14511 834 aa11.5□□□□□ -0.57
UPF2-204ENST00000460569 DUSP28Q4G0W2 176 aa11.5□□□□□ -0.57
UPF2-204ENST00000460569 TMEM63BQ5T3F8 832 aa11.5□□□□□ -0.57
UPF2-204ENST00000460569 IQSEC1Q6DN90 963 aa11.5□□□□□ -0.57
UPF2-204ENST00000460569 SLFN12Q8IYM2 578 aa11.5□□□□□ -0.57
UPF2-204ENST00000460569 HAS1Q92839 578 aa11.5□□□□□ -0.57
UPF2-204ENST00000460569 COPS5Q92905 334 aa11.5□□□□□ -0.57
UPF2-204ENST00000460569 SLC5A5Q92911 643 aa11.5□□□□□ -0.57
UPF2-204ENST00000460569 TNPO1Q92973 898 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms