RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 CEP95Q96GE4 821 aa6.72□□□□□ -1.33
VPS8-214ENST00000458721 STRBPQ96SI9 672 aaKnown RBP6.72□□□□□ -1.33
VPS8-214ENST00000458721 MPHOSPH6Q99547 160 aaKnown RBP6.72□□□□□ -1.33
VPS8-214ENST00000458721 NACAP1Q9BZK3 213 aa6.72□□□□□ -1.33
VPS8-214ENST00000458721 LRRCC1Q9C099 1032 aa6.72□□□□□ -1.33
VPS8-214ENST00000458721 MAF1Q9H063 256 aa6.72□□□□□ -1.33
VPS8-214ENST00000458721 PUS7LQ9H0K6 701 aaKnown RBP6.72□□□□□ -1.33
VPS8-214ENST00000458721 AP5M1Q9H0R1 490 aa6.72□□□□□ -1.33
VPS8-214ENST00000458721 BOLA2Q9H3K6 86 aa6.72□□□□□ -1.33
VPS8-214ENST00000458721 A1CFQ9NQ94 594 aaKnown RBP6.72□□□□□ -1.33
VPS8-214ENST00000458721 ZBTB40Q9NUA8 1239 aa6.72□□□□□ -1.33
VPS8-214ENST00000458721 ADD3Q9UEY8 706 aaKnown RBP6.72□□□□□ -1.33
VPS8-214ENST00000458721 SLC4A7Q9Y6M7 1214 aa6.72□□□□□ -1.33
VPS8-214ENST00000458721 REV3LO60673 3130 aa6.72□□□□□ -1.33
VPS8-214ENST00000458721 SIP14410 1827 aa6.71□□□□□ -1.33
VPS8-214ENST00000458721 COL4A6Q14031 1691 aa6.71□□□□□ -1.33
VPS8-214ENST00000458721 NKRFO15226 690 aaKnown RBP eCLIP6.71□□□□□ -1.34
VPS8-214ENST00000458721 B4GALT4O60513 344 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 BAIAP3O94812 1187 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 PARNO95453 639 aaKnown RBP6.71□□□□□ -1.34
VPS8-214ENST00000458721 TSPY3P0CV98 308 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 TSPY8P0CW00 308 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 ATP2A2P16615 1042 aaKnown RBP6.71□□□□□ -1.34
VPS8-214ENST00000458721 FSHRP23945 695 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 CYP2C18P33260 490 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 SLC1A4P43007 532 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 TDO2P48775 406 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 PTPN11Q06124 597 aaPredicted RBP6.71□□□□□ -1.34
VPS8-214ENST00000458721 ADGRE1Q14246 886 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 DUSP28Q4G0W2 176 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 RCSD1Q6JBY9 416 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 CXCL17Q6UXB2 119 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 ZNF444Q8N0Y2 327 aaPredicted RBP6.71□□□□□ -1.34
VPS8-214ENST00000458721 NEDD1Q8NHV4 660 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 ITPKCQ96DU7 683 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 PURBQ96QR8 312 aaKnown RBP6.71□□□□□ -1.34
VPS8-214ENST00000458721 NUP88Q99567 741 aaPredicted RBP6.71□□□□□ -1.34
VPS8-214ENST00000458721 ARHGAP9Q9BRR9 750 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 WNT8AQ9H1J5 351 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 ALDH8A1Q9H2A2 487 aaPredicted RBP6.71□□□□□ -1.34
VPS8-214ENST00000458721 NKX2-4Q9H2Z4 354 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 RAVER2Q9HCJ3 691 aaKnown RBP6.71□□□□□ -1.34
VPS8-214ENST00000458721 ECHDC1Q9NTX5 307 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 RNF146Q9NTX7 359 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 CLIP2Q9UDT6 1046 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 HCN4Q9Y3Q4 1203 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 ASTN1O14525 1302 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 TNKSO95271 1327 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 SCN5AQ14524 2016 aa6.71□□□□□ -1.34
VPS8-214ENST00000458721 PRRC2BQ5JSZ5 2229 aaKnown RBP6.7□□□□□ -1.34
VPS8-214ENST00000458721 PTPRSQ13332 1948 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 GRXCR1A8MXD5 290 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 TMEM232C9JQI7 657 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 GPAA1O43292 621 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 KPNA6O60684 536 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 ACRP10323 421 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 IGFBP4P22692 258 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 NT5C2P49902 561 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 CNTN2Q02246 1040 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 NR6A1Q15406 480 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 TMEM67Q5HYA8 995 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 SLFN13Q68D06 897 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 NFRKBQ6P4R8 1299 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 NOL8Q76FK4 1167 aaKnown RBP6.7□□□□□ -1.34
VPS8-214ENST00000458721 OTOP2Q7RTS6 562 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 TICAM2Q86XR7 235 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 SIRT2Q8IXJ6 389 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 CCDC155Q8N6L0 562 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 PNMA1Q8ND90 353 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 PANK1Q8TE04 598 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 STAG1Q8WVM7 1258 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 ZFAND3Q9H8U3 227 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 EPB41L4AQ9HCS5 686 aaPredicted RBP6.7□□□□□ -1.34
VPS8-214ENST00000458721 HOMER2Q9NSB8 354 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 CYP39A1Q9NYL5 469 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 LMCD1Q9NZU5 365 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 YBX2Q9Y2T7 364 aaKnown RBP6.7□□□□□ -1.34
VPS8-214ENST00000458721 LAMA4Q16363 1823 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 ZNF536O15090 1300 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 GRIN2DO15399 1336 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 TTC41PQ6P2S7 1318 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 KIAA1217Q5T5P2 1943 aa6.7□□□□□ -1.34
VPS8-214ENST00000458721 BRWD1Q9NSI6 2320 aa6.69□□□□□ -1.34
VPS8-214ENST00000458721 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.69□□□□□ -1.34
VPS8-214ENST00000458721 RBM47A0AV96 593 aaKnown RBP6.69□□□□□ -1.34
VPS8-214ENST00000458721 ZBBXA8MT70 800 aa6.69□□□□□ -1.34
VPS8-214ENST00000458721 MINDY4BA8MYZ0 360 aa6.69□□□□□ -1.34
VPS8-214ENST00000458721 B4DLN1 442 aa6.69□□□□□ -1.34
VPS8-214ENST00000458721 KIF28PB7ZC32 967 aa6.69□□□□□ -1.34
VPS8-214ENST00000458721 SMIM22K7EJ46 135 aa6.69□□□□□ -1.34
VPS8-214ENST00000458721 RNF113AO15541 343 aaKnown RBP6.69□□□□□ -1.34
VPS8-214ENST00000458721 EFCAB14O75071 495 aa6.69□□□□□ -1.34
VPS8-214ENST00000458721 UPP2O95045 317 aa6.69□□□□□ -1.34
VPS8-214ENST00000458721 ICAM1P05362 532 aa6.69□□□□□ -1.34
VPS8-214ENST00000458721 NOVP48745 357 aa6.69□□□□□ -1.34
VPS8-214ENST00000458721 MRPL12P52815 198 aaKnown RBP6.69□□□□□ -1.34
VPS8-214ENST00000458721 PURAQ00577 322 aaKnown RBP6.69□□□□□ -1.34
VPS8-214ENST00000458721 HNRNPUQ00839 825 aaKnown RBP eCLIP6.69□□□□□ -1.34
VPS8-214ENST00000458721 BEX3Q00994 111 aa6.69□□□□□ -1.34
VPS8-214ENST00000458721 RBL2Q08999 1139 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms