RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 ALG1Q9BT22 464 aa25.17■■□□□ 1.62
SEC22C-213ENST00000456222 GTF2IRD1Q9UHL9 959 aa25.17■■□□□ 1.62
SEC22C-213ENST00000456222 FRMPD4Q14CM0 1322 aa25.16■■□□□ 1.62
SEC22C-213ENST00000456222 MUC3AQ02505 3323 aa25.16■■□□□ 1.62
SEC22C-213ENST00000456222 DDAH1O94760 285 aa25.16■■□□□ 1.62
SEC22C-213ENST00000456222 ATP2A2P16615 1042 aaKnown RBP25.16■■□□□ 1.62
SEC22C-213ENST00000456222 CCND2P30279 289 aa25.16■■□□□ 1.62
SEC22C-213ENST00000456222 BFSP2Q13515 415 aa25.16■■□□□ 1.62
SEC22C-213ENST00000456222 MFSD10Q14728 455 aa25.16■■□□□ 1.62
SEC22C-213ENST00000456222 NECTIN1Q15223 517 aa25.16■■□□□ 1.62
SEC22C-213ENST00000456222 CREB3L3Q68CJ9 461 aa25.16■■□□□ 1.62
SEC22C-213ENST00000456222 CMTR1Q8N1G2 835 aaKnown RBP25.16■■□□□ 1.62
SEC22C-213ENST00000456222 RETREG2Q8NC44 543 aa25.16■■□□□ 1.62
SEC22C-213ENST00000456222 WNT8BQ93098 351 aa25.16■■□□□ 1.62
SEC22C-213ENST00000456222 SPZ1Q9BXG8 430 aa25.16■■□□□ 1.62
SEC22C-213ENST00000456222 LRRC2Q9BYS8 371 aa25.16■■□□□ 1.62
SEC22C-213ENST00000456222 RFC2P35250 354 aa25.15■■□□□ 1.62
SEC22C-213ENST00000456222 ZNF200P98182 395 aaPredicted RBP25.15■■□□□ 1.62
SEC22C-213ENST00000456222 KIAA0753Q2KHM9 967 aa25.15■■□□□ 1.62
SEC22C-213ENST00000456222 SRBD1Q8N5C6 995 aaKnown RBP25.15■■□□□ 1.62
SEC22C-213ENST00000456222 SPATA33Q96N06 139 aa25.15■■□□□ 1.62
SEC22C-213ENST00000456222 MAP3K14Q99558 947 aa25.15■■□□□ 1.62
SEC22C-213ENST00000456222 SLC28A3Q9HAS3 691 aa25.15■■□□□ 1.62
SEC22C-213ENST00000456222 PRDM6Q9NQX0 595 aa25.15■■□□□ 1.62
SEC22C-213ENST00000456222 XIRP2A4UGR9 3374 aa25.15■■□□□ 1.62
SEC22C-213ENST00000456222 MCM5P33992 734 aa25.14■■□□□ 1.62
SEC22C-213ENST00000456222 TRAF1Q13077 416 aa25.14■■□□□ 1.62
SEC22C-213ENST00000456222 SEMA3FQ13275 785 aa25.14■■□□□ 1.62
SEC22C-213ENST00000456222 USP17L6PQ6QN14 398 aa25.14■■□□□ 1.62
SEC22C-213ENST00000456222 CASC1Q6TDU7 716 aa25.14■■□□□ 1.62
SEC22C-213ENST00000456222 CTCFLQ8NI51 663 aaPredicted RBP25.14■■□□□ 1.62
SEC22C-213ENST00000456222 FTOQ9C0B1 505 aaKnown RBP eCLIP25.14■■□□□ 1.62
SEC22C-213ENST00000456222 TELO2Q9Y4R8 837 aa25.14■■□□□ 1.62
SEC22C-213ENST00000456222 PCDHA11Q9Y5I1 949 aa25.14■■□□□ 1.62
SEC22C-213ENST00000456222 TCTN1Q2MV58 587 aa25.13■■□□□ 1.61
SEC22C-213ENST00000456222 C7orf31Q8N865 590 aa25.13■■□□□ 1.61
SEC22C-213ENST00000456222 C16orf70Q9BSU1 422 aa25.13■■□□□ 1.61
SEC22C-213ENST00000456222 ANO2Q9NQ90 1003 aa25.13■■□□□ 1.61
SEC22C-213ENST00000456222 hCG_1642624A0A1W2PR95 340 aa25.12■■□□□ 1.61
SEC22C-213ENST00000456222 MEIS2O14770 477 aa25.12■■□□□ 1.61
SEC22C-213ENST00000456222 ARHGEF15O94989 841 aa25.12■■□□□ 1.61
SEC22C-213ENST00000456222 TRIM71Q2Q1W2 868 aaKnown RBP25.12■■□□□ 1.61
SEC22C-213ENST00000456222 KCNV1Q6PIU1 500 aa25.12■■□□□ 1.61
SEC22C-213ENST00000456222 TRAF7Q6Q0C0 670 aa25.12■■□□□ 1.61
SEC22C-213ENST00000456222 NFXL1Q6ZNB6 911 aa25.12■■□□□ 1.61
SEC22C-213ENST00000456222 CAGE1Q8TC20 777 aa25.12■■□□□ 1.61
SEC22C-213ENST00000456222 AFAP1L1Q8TED9 768 aa25.12■■□□□ 1.61
SEC22C-213ENST00000456222 PPM1EQ8WY54 764 aa25.12■■□□□ 1.61
SEC22C-213ENST00000456222 RRP36Q96EU6 259 aaKnown RBP25.12■■□□□ 1.61
SEC22C-213ENST00000456222 TMEM87BQ96K49 555 aa25.12■■□□□ 1.61
SEC22C-213ENST00000456222 GAS2L1Q99501 681 aaPredicted RBP25.12■■□□□ 1.61
SEC22C-213ENST00000456222 MTA3Q9BTC8 594 aa25.12■■□□□ 1.61
SEC22C-213ENST00000456222 RTEL1Q9NZ71 1219 aa25.12■■□□□ 1.61
SEC22C-213ENST00000456222 PPFIA4O75335 1185 aa25.11■■□□□ 1.61
SEC22C-213ENST00000456222 TGFB3P10600 412 aa25.11■■□□□ 1.61
SEC22C-213ENST00000456222 CKBP12277 381 aa25.11■■□□□ 1.61
SEC22C-213ENST00000456222 SELPP16109 830 aa25.11■■□□□ 1.61
SEC22C-213ENST00000456222 KIF5BP33176 963 aa25.11■■□□□ 1.61
SEC22C-213ENST00000456222 RBL2Q08999 1139 aa25.11■■□□□ 1.61
SEC22C-213ENST00000456222 PPP2R2DQ66LE6 453 aa25.11■■□□□ 1.61
SEC22C-213ENST00000456222 LRRC8DQ7L1W4 858 aa25.11■■□□□ 1.61
SEC22C-213ENST00000456222 INPP4AQ96PE3 977 aaPredicted RBP25.11■■□□□ 1.61
SEC22C-213ENST00000456222 KATNAL1Q9BW62 490 aa25.11■■□□□ 1.61
SEC22C-213ENST00000456222 PRRC2BQ5JSZ5 2229 aaKnown RBP25.1■■□□□ 1.61
SEC22C-213ENST00000456222 NBNO60934 754 aa25.1■■□□□ 1.61
SEC22C-213ENST00000456222 CA3P07451 260 aa25.1■■□□□ 1.61
SEC22C-213ENST00000456222 ACTN1P12814 892 aa25.1■■□□□ 1.61
SEC22C-213ENST00000456222 LIFRP42702 1097 aa25.1■■□□□ 1.61
SEC22C-213ENST00000456222 BMP2KLQ5H9B9 411 aa25.1■■□□□ 1.61
SEC22C-213ENST00000456222 TMCO2Q7Z6W1 182 aaPredicted RBP25.1■■□□□ 1.61
SEC22C-213ENST00000456222 MLXIPQ9HAP2 919 aa25.1■■□□□ 1.61
SEC22C-213ENST00000456222 CCDC69A6NI79 296 aa25.09■■□□□ 1.61
SEC22C-213ENST00000456222 SPATA31C2B4DYI2 1134 aa25.09■■□□□ 1.61
SEC22C-213ENST00000456222 IGFBP4P22692 258 aa25.09■■□□□ 1.61
SEC22C-213ENST00000456222 SMARCA1P28370 1054 aa25.09■■□□□ 1.61
SEC22C-213ENST00000456222 ICAM3P32942 547 aa25.09■■□□□ 1.61
SEC22C-213ENST00000456222 MBTPS1Q14703 1052 aa25.09■■□□□ 1.61
SEC22C-213ENST00000456222 CCDC155Q8N6L0 562 aa25.09■■□□□ 1.61
SEC22C-213ENST00000456222 PTK7Q13308 1070 aa25.08■■□□□ 1.61
SEC22C-213ENST00000456222 CCDC85BQ15834 202 aaPredicted RBP25.08■■□□□ 1.61
SEC22C-213ENST00000456222 SPRED2Q7Z698 418 aa25.08■■□□□ 1.61
SEC22C-213ENST00000456222 HERC6Q8IVU3 1022 aa25.08■■□□□ 1.61
SEC22C-213ENST00000456222 CCDC82Q8N4S0 544 aa25.08■■□□□ 1.61
SEC22C-213ENST00000456222 SMARCC2Q8TAQ2 1214 aa25.08■■□□□ 1.61
SEC22C-213ENST00000456222 TCEANC2Q96MN5 208 aa25.08■■□□□ 1.61
SEC22C-213ENST00000456222 SLC9A7Q96T83 725 aa25.08■■□□□ 1.61
SEC22C-213ENST00000456222 LZTS2Q9BRK4 669 aa25.08■■□□□ 1.61
SEC22C-213ENST00000456222 SEC63Q9UGP8 760 aaKnown RBP25.08■■□□□ 1.61
SEC22C-213ENST00000456222 EPOPA6NHQ4 379 aa25.07■■□□□ 1.6
SEC22C-213ENST00000456222 RFXAPO00287 272 aa25.07■■□□□ 1.6
SEC22C-213ENST00000456222 PIK3CDO00329 1044 aa25.07■■□□□ 1.6
SEC22C-213ENST00000456222 LGALS2P05162 132 aa25.07■■□□□ 1.6
SEC22C-213ENST00000456222 ZNF618Q5T7W0 954 aa25.07■■□□□ 1.6
SEC22C-213ENST00000456222 CENPQQ7L2Z9 268 aaPredicted RBP25.07■■□□□ 1.6
SEC22C-213ENST00000456222 CYFIP1Q7L576 1253 aa25.07■■□□□ 1.6
SEC22C-213ENST00000456222 TMTC2Q8N394 836 aa25.07■■□□□ 1.6
SEC22C-213ENST00000456222 CERS4Q9HA82 394 aa25.07■■□□□ 1.6
SEC22C-213ENST00000456222 CXCL10P02778 98 aa25.06■■□□□ 1.6
SEC22C-213ENST00000456222 GNAQP50148 359 aa25.06■■□□□ 1.6
SEC22C-213ENST00000456222 WDR5P61964 334 aaKnown RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms