RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 ABHD16BQ9H3Z7 469 aa17.91■□□□□ 0.46
VCX3B-204ENST00000453306 PXMP2Q9NR77 195 aa17.91■□□□□ 0.46
VCX3B-204ENST00000453306 FRMPD4Q14CM0 1322 aa17.91■□□□□ 0.46
VCX3B-204ENST00000453306 MROH7Q68CQ1 1323 aa17.91■□□□□ 0.46
VCX3B-204ENST00000453306 SYNRGQ9UMZ2 1314 aa17.91■□□□□ 0.46
VCX3B-204ENST00000453306 EIF2AK2P19525 551 aaKnown RBP17.9■□□□□ 0.46
VCX3B-204ENST00000453306 GNA11P29992 359 aa17.9■□□□□ 0.46
VCX3B-204ENST00000453306 MRPS9P82933 396 aaKnown RBP17.9■□□□□ 0.46
VCX3B-204ENST00000453306 FPGSQ05932 587 aa17.9■□□□□ 0.46
VCX3B-204ENST00000453306 ACVR2BQ13705 512 aa17.9■□□□□ 0.46
VCX3B-204ENST00000453306 PKP1Q13835 747 aa17.9■□□□□ 0.46
VCX3B-204ENST00000453306 KCNA10Q16322 511 aa17.9■□□□□ 0.46
VCX3B-204ENST00000453306 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.9■□□□□ 0.46
VCX3B-204ENST00000453306 DIS3L2Q8IYB7 885 aaKnown RBP17.9■□□□□ 0.46
VCX3B-204ENST00000453306 FAM177A1Q8N128 213 aaPredicted RBP17.9■□□□□ 0.46
VCX3B-204ENST00000453306 KLHDC9Q8NEP7 349 aa17.9■□□□□ 0.46
VCX3B-204ENST00000453306 CCDC12Q8WUD4 166 aaPredicted RBP17.9■□□□□ 0.46
VCX3B-204ENST00000453306 RNPC3Q96LT9 517 aaKnown RBP17.9■□□□□ 0.46
VCX3B-204ENST00000453306 GLT1D1Q96MS3 346 aa17.9■□□□□ 0.46
VCX3B-204ENST00000453306 SEMA6BQ9H3T3 888 aa17.9■□□□□ 0.46
VCX3B-204ENST00000453306 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.9■□□□□ 0.46
VCX3B-204ENST00000453306 TMEM265A0A087WTH1 108 aa17.89■□□□□ 0.45
VCX3B-204ENST00000453306 WNT7AO00755 349 aa17.89■□□□□ 0.45
VCX3B-204ENST00000453306 CST5P28325 142 aaPredicted RBP17.89■□□□□ 0.45
VCX3B-204ENST00000453306 DDIT3P35638 169 aa17.89■□□□□ 0.45
VCX3B-204ENST00000453306 BECN1Q14457 450 aa17.89■□□□□ 0.45
VCX3B-204ENST00000453306 TMEM63BQ5T3F8 832 aa17.89■□□□□ 0.45
VCX3B-204ENST00000453306 GALNT17Q6IS24 598 aa17.89■□□□□ 0.45
VCX3B-204ENST00000453306 VSIG10LQ86VR7 867 aa17.89■□□□□ 0.45
VCX3B-204ENST00000453306 REXO1Q8N1G1 1221 aaKnown RBP17.89■□□□□ 0.45
VCX3B-204ENST00000453306 DNERQ8NFT8 737 aa17.89■□□□□ 0.45
VCX3B-204ENST00000453306 LENG1Q96BZ8 264 aaPredicted RBP17.89■□□□□ 0.45
VCX3B-204ENST00000453306 ANO3Q9BYT9 981 aa17.89■□□□□ 0.45
VCX3B-204ENST00000453306 MTMR6Q9Y217 621 aa17.89■□□□□ 0.45
VCX3B-204ENST00000453306 ELP1O95163 1332 aa17.89■□□□□ 0.45
VCX3B-204ENST00000453306 RGS20O76081 388 aa17.88■□□□□ 0.45
VCX3B-204ENST00000453306 NR3C2P08235 984 aa17.88■□□□□ 0.45
VCX3B-204ENST00000453306 C6orf222P0C671 652 aaPredicted RBP17.88■□□□□ 0.45
VCX3B-204ENST00000453306 PGM5Q15124 567 aa17.88■□□□□ 0.45
VCX3B-204ENST00000453306 ARMCX2Q7L311 632 aa17.88■□□□□ 0.45
VCX3B-204ENST00000453306 NSUN6Q8TEA1 469 aaKnown RBP17.88■□□□□ 0.45
VCX3B-204ENST00000453306 VTI1AQ96AJ9 217 aa17.88■□□□□ 0.45
VCX3B-204ENST00000453306 CDX2Q99626 313 aaPredicted RBP17.88■□□□□ 0.45
VCX3B-204ENST00000453306 LCTP09848 1927 aa17.88■□□□□ 0.45
VCX3B-204ENST00000453306 XBP1P17861 261 aa17.87■□□□□ 0.45
VCX3B-204ENST00000453306 PTGS1P23219 599 aa17.87■□□□□ 0.45
VCX3B-204ENST00000453306 KRT2P35908 639 aa17.87■□□□□ 0.45
VCX3B-204ENST00000453306 SREBF1P36956 1147 aa17.87■□□□□ 0.45
VCX3B-204ENST00000453306 FAAP100Q0VG06 881 aa17.87■□□□□ 0.45
VCX3B-204ENST00000453306 AP3B2Q13367 1082 aa17.87■□□□□ 0.45
VCX3B-204ENST00000453306 CCDC144BQ3MJ40 725 aa17.87■□□□□ 0.45
VCX3B-204ENST00000453306 ARHGEF16Q5VV41 709 aa17.87■□□□□ 0.45
VCX3B-204ENST00000453306 TEX2Q8IWB9 1127 aa17.87■□□□□ 0.45
VCX3B-204ENST00000453306 CYP2W1Q8TAV3 490 aa17.87■□□□□ 0.45
VCX3B-204ENST00000453306 GLT8D2Q9H1C3 349 aa17.87■□□□□ 0.45
VCX3B-204ENST00000453306 PDGFCQ9NRA1 345 aa17.87■□□□□ 0.45
VCX3B-204ENST00000453306 ZDHHC9Q9Y397 364 aa17.87■□□□□ 0.45
VCX3B-204ENST00000453306 LAMA2P24043 3122 aaKnown RBP17.86■□□□□ 0.45
VCX3B-204ENST00000453306 TIMP1P01033 207 aa17.86■□□□□ 0.45
VCX3B-204ENST00000453306 FOSP01100 380 aaPredicted RBP17.86■□□□□ 0.45
VCX3B-204ENST00000453306 ASGR1P07306 291 aa17.86■□□□□ 0.45
VCX3B-204ENST00000453306 ITGB8P26012 769 aa17.86■□□□□ 0.45
VCX3B-204ENST00000453306 U2AF2P26368 475 aaKnown RBP eCLIP17.86■□□□□ 0.45
VCX3B-204ENST00000453306 GJA9P57773 515 aa17.86■□□□□ 0.45
VCX3B-204ENST00000453306 TRIM29Q14134 588 aa17.86■□□□□ 0.45
VCX3B-204ENST00000453306 CCSAPQ6IQ19 270 aaPredicted RBP17.86■□□□□ 0.45
VCX3B-204ENST00000453306 TAPT1Q6NXT6 567 aa17.86■□□□□ 0.45
VCX3B-204ENST00000453306 PIK3AP1Q6ZUJ8 805 aa17.86■□□□□ 0.45
VCX3B-204ENST00000453306 EEPD1Q7L9B9 569 aa17.86■□□□□ 0.45
VCX3B-204ENST00000453306 BICD2Q8TD16 824 aa17.86■□□□□ 0.45
VCX3B-204ENST00000453306 UPF3AQ9H1J1 476 aaKnown RBP17.86■□□□□ 0.45
VCX3B-204ENST00000453306 ADD3Q9UEY8 706 aaKnown RBP17.86■□□□□ 0.45
VCX3B-204ENST00000453306 A0A0U1RQG5 324 aaPredicted RBP17.85■□□□□ 0.45
VCX3B-204ENST00000453306 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.85■□□□□ 0.45
VCX3B-204ENST00000453306 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.85■□□□□ 0.45
VCX3B-204ENST00000453306 ASB14A6NK59 587 aa17.85■□□□□ 0.45
VCX3B-204ENST00000453306 SPDYE3A6NKU9 549 aa17.85■□□□□ 0.45
VCX3B-204ENST00000453306 TLR3O15455 904 aaKnown RBP17.85■□□□□ 0.45
VCX3B-204ENST00000453306 ADCY6O43306 1168 aa17.85■□□□□ 0.45
VCX3B-204ENST00000453306 MYCLP12524 364 aaPredicted RBP17.85■□□□□ 0.45
VCX3B-204ENST00000453306 ITGB5P18084 799 aa17.85■□□□□ 0.45
VCX3B-204ENST00000453306 ANP32AP39687 249 aaKnown RBP17.85■□□□□ 0.45
VCX3B-204ENST00000453306 ARHGAP4P98171 946 aa17.85■□□□□ 0.45
VCX3B-204ENST00000453306 SEMA3FQ13275 785 aa17.85■□□□□ 0.45
VCX3B-204ENST00000453306 INF2Q27J81 1249 aa17.85■□□□□ 0.45
VCX3B-204ENST00000453306 GNASQ5JWF2 1037 aa17.85■□□□□ 0.45
VCX3B-204ENST00000453306 MAFAQ8NHW3 353 aaPredicted RBP17.85■□□□□ 0.45
VCX3B-204ENST00000453306 TBCKQ8TEA7 893 aa17.85■□□□□ 0.45
VCX3B-204ENST00000453306 IWS1Q96ST2 819 aa17.85■□□□□ 0.45
VCX3B-204ENST00000453306 RTEL1Q9NZ71 1219 aa17.85■□□□□ 0.45
VCX3B-204ENST00000453306 FAM86B1E9PN63 330 aa17.84■□□□□ 0.45
VCX3B-204ENST00000453306 STX6O43752 255 aa17.84■□□□□ 0.45
VCX3B-204ENST00000453306 HSP90AA1P07900 732 aaKnown RBP17.84■□□□□ 0.45
VCX3B-204ENST00000453306 CYP3A4P08684 503 aa17.84■□□□□ 0.45
VCX3B-204ENST00000453306 FAM86B2P0C5J1 330 aa17.84■□□□□ 0.45
VCX3B-204ENST00000453306 TOB1P50616 345 aaPredicted RBP17.84■□□□□ 0.45
VCX3B-204ENST00000453306 RESTQ13127 1097 aa17.84■□□□□ 0.45
VCX3B-204ENST00000453306 PPIGQ13427 754 aaKnown RBP eCLIP17.84■□□□□ 0.45
VCX3B-204ENST00000453306 PCNX4Q63HM2 1172 aa17.84■□□□□ 0.45
VCX3B-204ENST00000453306 MFSD5Q6N075 450 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms