RNA–Protein interactions for RNA: ENST00000448874.5

PTMA-208, Transcript of prothymosin alpha, humanhuman

TSL 2

Gene PTMA, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-208ENST00000448874 SYMPKQ92797 1274 aaKnown RBP19.27■□□□□ 0.68
PTMA-208ENST00000448874 RBM8AQ9Y5S9 174 aaKnown RBP19.27■□□□□ 0.68
PTMA-208ENST00000448874 PTPRSQ13332 1948 aa19.27■□□□□ 0.67
PTMA-208ENST00000448874 BAIAP3O94812 1187 aa19.26■□□□□ 0.67
PTMA-208ENST00000448874 HOXD8P13378 290 aaPredicted RBP19.26■□□□□ 0.67
PTMA-208ENST00000448874 SELPP16109 830 aa19.26■□□□□ 0.67
PTMA-208ENST00000448874 UBA1P22314 1058 aaKnown RBP19.26■□□□□ 0.67
PTMA-208ENST00000448874 RBL2Q08999 1139 aa19.26■□□□□ 0.67
PTMA-208ENST00000448874 CCDC85BQ15834 202 aaPredicted RBP19.26■□□□□ 0.67
PTMA-208ENST00000448874 HSDL1Q3SXM5 330 aa19.26■□□□□ 0.67
PTMA-208ENST00000448874 TJAP1Q5JTD0 557 aa19.26■□□□□ 0.67
PTMA-208ENST00000448874 CELF3Q5SZQ8 465 aaKnown RBP19.26■□□□□ 0.67
PTMA-208ENST00000448874 PHOSPHO2Q8TCD6 241 aa19.26■□□□□ 0.67
PTMA-208ENST00000448874 IGDCC4Q8TDY8 1250 aa19.26■□□□□ 0.67
PTMA-208ENST00000448874 GPKOWQ92917 476 aaPredicted RBP eCLIP19.26■□□□□ 0.673e-39■■□□□ 12.3
PTMA-208ENST00000448874 SPATA33Q96N06 139 aa19.26■□□□□ 0.67
PTMA-208ENST00000448874 SP2Q02086 613 aa19.25■□□□□ 0.67
PTMA-208ENST00000448874 GPNMBQ14956 572 aa19.25■□□□□ 0.67
PTMA-208ENST00000448874 HERC6Q8IVU3 1022 aa19.25■□□□□ 0.67
PTMA-208ENST00000448874 MYL10Q9BUA6 226 aa19.25■□□□□ 0.67
PTMA-208ENST00000448874 RNF39Q9H2S5 420 aa19.25■□□□□ 0.67
PTMA-208ENST00000448874 LY9Q9HBG7 655 aa19.25■□□□□ 0.67
PTMA-208ENST00000448874 THEGQ9P2T0 379 aa19.25■□□□□ 0.67
PTMA-208ENST00000448874 FRMPD4Q14CM0 1322 aa19.25■□□□□ 0.67
PTMA-208ENST00000448874 TGFB3P10600 412 aa19.24■□□□□ 0.67
PTMA-208ENST00000448874 CKBP12277 381 aa19.24■□□□□ 0.67
PTMA-208ENST00000448874 ZNF654Q8IZM8 581 aa19.24■□□□□ 0.67
PTMA-208ENST00000448874 CTCFLQ8NI51 663 aaPredicted RBP19.24■□□□□ 0.67
PTMA-208ENST00000448874 TTC28Q96AY4 2481 aa19.23■□□□□ 0.67
PTMA-208ENST00000448874 NBNO60934 754 aa19.23■□□□□ 0.67
PTMA-208ENST00000448874 PPFIA4O75335 1185 aa19.23■□□□□ 0.67
PTMA-208ENST00000448874 DDAH1O94760 285 aa19.23■□□□□ 0.67
PTMA-208ENST00000448874 PARNO95453 639 aaKnown RBP19.23■□□□□ 0.67
PTMA-208ENST00000448874 KCNJ6P48051 423 aa19.23■□□□□ 0.67
PTMA-208ENST00000448874 ZNF200P98182 395 aaPredicted RBP19.23■□□□□ 0.67
PTMA-208ENST00000448874 PTK7Q13308 1070 aa19.23■□□□□ 0.67
PTMA-208ENST00000448874 CASC1Q6TDU7 716 aa19.23■□□□□ 0.67
PTMA-208ENST00000448874 MICALL1Q8N3F8 863 aa19.23■□□□□ 0.67
PTMA-208ENST00000448874 WNT8BQ93098 351 aa19.23■□□□□ 0.67
PTMA-208ENST00000448874 MAP3K14Q99558 947 aa19.23■□□□□ 0.67
PTMA-208ENST00000448874 SPZ1Q9BXG8 430 aa19.23■□□□□ 0.67
PTMA-208ENST00000448874 CERS4Q9HA82 394 aa19.23■□□□□ 0.67
PTMA-208ENST00000448874 MLXIPQ9HAP2 919 aa19.23■□□□□ 0.67
PTMA-208ENST00000448874 CHD7Q9P2D1 2997 aa19.23■□□□□ 0.67
PTMA-208ENST00000448874 DOCK5Q9H7D0 1870 aa19.22■□□□□ 0.67
PTMA-208ENST00000448874 KIF28PB7ZC32 967 aa19.22■□□□□ 0.67
PTMA-208ENST00000448874 PRC1O43663 620 aa19.22■□□□□ 0.67
PTMA-208ENST00000448874 ARHGEF15O94989 841 aa19.22■□□□□ 0.67
PTMA-208ENST00000448874 CXCL10P02778 98 aa19.22■□□□□ 0.67
PTMA-208ENST00000448874 KIF5BP33176 963 aa19.22■□□□□ 0.67
PTMA-208ENST00000448874 WDR5P61964 334 aaKnown RBP19.22■□□□□ 0.67
PTMA-208ENST00000448874 MRPS9P82933 396 aaKnown RBP19.22■□□□□ 0.67
PTMA-208ENST00000448874 HIC1Q14526 733 aa19.22■□□□□ 0.67
PTMA-208ENST00000448874 TRIM71Q2Q1W2 868 aaKnown RBP19.22■□□□□ 0.67
PTMA-208ENST00000448874 GNPTABQ3T906 1256 aa19.22■□□□□ 0.67
PTMA-208ENST00000448874 CNKSR3Q6P9H4 555 aa19.22■□□□□ 0.67
PTMA-208ENST00000448874 ATXN2LQ8WWM7 1075 aaKnown RBP19.22■□□□□ 0.67
PTMA-208ENST00000448874 C16orf70Q9BSU1 422 aa19.22■□□□□ 0.67
PTMA-208ENST00000448874 EPOPA6NHQ4 379 aa19.21■□□□□ 0.67
PTMA-208ENST00000448874 RFXAPO00287 272 aa19.21■□□□□ 0.67
PTMA-208ENST00000448874 TLL1O43897 1013 aa19.21■□□□□ 0.67
PTMA-208ENST00000448874 TAP1Q03518 808 aa19.21■□□□□ 0.67
PTMA-208ENST00000448874 TRAF7Q6Q0C0 670 aa19.21■□□□□ 0.67
PTMA-208ENST00000448874 NFXL1Q6ZNB6 911 aa19.21■□□□□ 0.67
PTMA-208ENST00000448874 RRP36Q96EU6 259 aaKnown RBP19.21■□□□□ 0.67
PTMA-208ENST00000448874 INPP4AQ96PE3 977 aaPredicted RBP19.21■□□□□ 0.67
PTMA-208ENST00000448874 MTA3Q9BTC8 594 aa19.21■□□□□ 0.67
PTMA-208ENST00000448874 LSG1Q9H089 658 aaKnown RBP19.21■□□□□ 0.67
PTMA-208ENST00000448874 BCAS3Q9H6U6 928 aa19.21■□□□□ 0.67
PTMA-208ENST00000448874 SEC63Q9UGP8 760 aaKnown RBP19.21■□□□□ 0.67
PTMA-208ENST00000448874 RBAK-RBAKDNI3L0D1 243 aa19.2■□□□□ 0.66
PTMA-208ENST00000448874 NOP56O00567 594 aaKnown RBP19.2■□□□□ 0.66
PTMA-208ENST00000448874 SH2B2O14492 632 aaPredicted RBP19.2■□□□□ 0.66
PTMA-208ENST00000448874 STAM2O75886 525 aa19.2■□□□□ 0.66
PTMA-208ENST00000448874 PLEKHA8P1O95397 391 aa19.2■□□□□ 0.66
PTMA-208ENST00000448874 LGALS2P05162 132 aa19.2■□□□□ 0.66
PTMA-208ENST00000448874 ICAM3P32942 547 aa19.2■□□□□ 0.66
PTMA-208ENST00000448874 MCM5P33992 734 aa19.2■□□□□ 0.66
PTMA-208ENST00000448874 DEFB103AP81534 67 aa19.2■□□□□ 0.66
PTMA-208ENST00000448874 SEMA3FQ13275 785 aa19.2■□□□□ 0.66
PTMA-208ENST00000448874 COL9A3Q14050 684 aaPredicted RBP19.2■□□□□ 0.66
PTMA-208ENST00000448874 TCTN1Q2MV58 587 aa19.2■□□□□ 0.66
PTMA-208ENST00000448874 ZNF618Q5T7W0 954 aa19.2■□□□□ 0.66
PTMA-208ENST00000448874 TMCO2Q7Z6W1 182 aaPredicted RBP19.2■□□□□ 0.66
PTMA-208ENST00000448874 SMARCC2Q8TAQ2 1214 aa19.2■□□□□ 0.66
PTMA-208ENST00000448874 ARNTL2Q8WYA1 636 aa19.2■□□□□ 0.66
PTMA-208ENST00000448874 RTEL1Q9NZ71 1219 aa19.2■□□□□ 0.66
PTMA-208ENST00000448874 PRRC2BQ5JSZ5 2229 aaKnown RBP19.2■□□□□ 0.66
PTMA-208ENST00000448874 CCDC69A6NI79 296 aa19.19■□□□□ 0.66
PTMA-208ENST00000448874 SPATA31C2B4DYI2 1134 aa19.19■□□□□ 0.66
PTMA-208ENST00000448874 H3BRB1 525 aa19.19■□□□□ 0.66
PTMA-208ENST00000448874 SLC27A2O14975 620 aa19.19■□□□□ 0.66
PTMA-208ENST00000448874 GTPBP6O43824 516 aaPredicted RBP19.19■□□□□ 0.66
PTMA-208ENST00000448874 RXRAP19793 462 aa19.19■□□□□ 0.66
PTMA-208ENST00000448874 SMARCA1P28370 1054 aa19.19■□□□□ 0.66
PTMA-208ENST00000448874 NEDD9Q14511 834 aa19.19■□□□□ 0.66
PTMA-208ENST00000448874 MBTPS1Q14703 1052 aa19.19■□□□□ 0.66
PTMA-208ENST00000448874 USP17L6PQ6QN14 398 aa19.19■□□□□ 0.66
PTMA-208ENST00000448874 METTL7BQ6UX53 244 aa19.19■□□□□ 0.66
PTMA-208ENST00000448874 CUL5Q93034 780 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms