RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 MCM3APO60318 1980 aa22.07■■□□□ 1.12
SGCE-207ENST00000447873 TECP42680 631 aa22.07■■□□□ 1.12
SGCE-207ENST00000447873 ZNF467Q7Z7K2 595 aaPredicted RBP22.07■■□□□ 1.12
SGCE-207ENST00000447873 SOCS4Q8WXH5 440 aa22.07■■□□□ 1.12
SGCE-207ENST00000447873 GJA10Q969M2 543 aa22.07■■□□□ 1.12
SGCE-207ENST00000447873 GPRASP2Q96D09 838 aa22.07■■□□□ 1.12
SGCE-207ENST00000447873 INPP4AQ96PE3 977 aaPredicted RBP22.07■■□□□ 1.12
SGCE-207ENST00000447873 ZNF577Q9BSK1 485 aa22.07■■□□□ 1.12
SGCE-207ENST00000447873 PCDHA12Q9UN75 941 aa22.07■■□□□ 1.12
SGCE-207ENST00000447873 PCNTO95613 3336 aa22.06■■□□□ 1.12
SGCE-207ENST00000447873 LRRC37A2A6NM11 1700 aa22.06■■□□□ 1.12
SGCE-207ENST00000447873 CMA1P23946 247 aa22.06■■□□□ 1.12
SGCE-207ENST00000447873 CTGFP29279 349 aa22.06■■□□□ 1.12
SGCE-207ENST00000447873 LONP1P36776 959 aaKnown RBP22.06■■□□□ 1.12
SGCE-207ENST00000447873 MAP2K1Q02750 393 aaPredicted RBP22.06■■□□□ 1.12
SGCE-207ENST00000447873 GNPTABQ3T906 1256 aa22.06■■□□□ 1.12
SGCE-207ENST00000447873 BEGAINQ9BUH8 593 aa22.06■■□□□ 1.12
SGCE-207ENST00000447873 RAB34Q9BZG1 259 aa22.06■■□□□ 1.12
SGCE-207ENST00000447873 MAFGO15525 162 aa22.05■■□□□ 1.12
SGCE-207ENST00000447873 RGS2P41220 211 aa22.05■■□□□ 1.12
SGCE-207ENST00000447873 FXR2P51116 673 aaKnown RBP eCLIP22.05■■□□□ 1.12
SGCE-207ENST00000447873 SPECC1Q5M775 1068 aa22.05■■□□□ 1.12
SGCE-207ENST00000447873 SHC4Q6S5L8 630 aa22.05■■□□□ 1.12
SGCE-207ENST00000447873 MRPS27Q92552 414 aaKnown RBP22.05■■□□□ 1.12
SGCE-207ENST00000447873 MAML3Q96JK9 1138 aa22.05■■□□□ 1.12
SGCE-207ENST00000447873 CDHR1Q96JP9 859 aa22.05■■□□□ 1.12
SGCE-207ENST00000447873 TRIM47Q96LD4 638 aa22.05■■□□□ 1.12
SGCE-207ENST00000447873 ARHGAP39Q9C0H5 1083 aa22.05■■□□□ 1.12
SGCE-207ENST00000447873 ZSWIM8A7E2V4 1837 aa22.05■■□□□ 1.12
SGCE-207ENST00000447873 IPO5O00410 1097 aaKnown RBP22.04■■□□□ 1.12
SGCE-207ENST00000447873 RGS20O76081 388 aa22.04■■□□□ 1.12
SGCE-207ENST00000447873 MBD3O95983 291 aa22.04■■□□□ 1.12
SGCE-207ENST00000447873 FSIP1Q8NA03 581 aa22.04■■□□□ 1.12
SGCE-207ENST00000447873 MORC4Q8TE76 937 aa22.04■■□□□ 1.12
SGCE-207ENST00000447873 SLC5A5Q92911 643 aa22.04■■□□□ 1.12
SGCE-207ENST00000447873 AGO4Q9HCK5 861 aaKnown RBP22.04■■□□□ 1.12
SGCE-207ENST00000447873 GJD2Q9UKL4 321 aa22.04■■□□□ 1.12
SGCE-207ENST00000447873 GPR25O00155 361 aa22.04■■□□□ 1.12
SGCE-207ENST00000447873 HOXC6P09630 235 aa22.04■■□□□ 1.12
SGCE-207ENST00000447873 LRCH2Q5VUJ6 765 aa22.04■■□□□ 1.12
SGCE-207ENST00000447873 RESP18Q5W5W9 173 aa22.04■■□□□ 1.12
SGCE-207ENST00000447873 SEPT14Q6ZU15 432 aa22.04■■□□□ 1.12
SGCE-207ENST00000447873 ARMCX2Q7L311 632 aa22.04■■□□□ 1.12
SGCE-207ENST00000447873 EEPD1Q7L9B9 569 aa22.04■■□□□ 1.12
SGCE-207ENST00000447873 NPLOC4Q8TAT6 608 aa22.04■■□□□ 1.12
SGCE-207ENST00000447873 GPT2Q8TD30 523 aa22.04■■□□□ 1.12
SGCE-207ENST00000447873 USP6NLQ92738 828 aa22.04■■□□□ 1.12
SGCE-207ENST00000447873 AK8Q96MA6 479 aa22.04■■□□□ 1.12
SGCE-207ENST00000447873 FAM13BQ9NYF5 915 aa22.04■■□□□ 1.12
SGCE-207ENST00000447873 PKD2L1Q9P0L9 805 aa22.04■■□□□ 1.12
SGCE-207ENST00000447873 A0A1B0GVL5 298 aa22.03■■□□□ 1.12
SGCE-207ENST00000447873 CYP2B6P20813 491 aa22.03■■□□□ 1.12
SGCE-207ENST00000447873 PDIA5Q14554 519 aa22.03■■□□□ 1.12
SGCE-207ENST00000447873 SKOR2Q2VWA4 1001 aaPredicted RBP22.03■■□□□ 1.12
SGCE-207ENST00000447873 MAMDC4Q6UXC1 1216 aa22.03■■□□□ 1.12
SGCE-207ENST00000447873 CCDC73Q6ZRK6 1079 aa22.03■■□□□ 1.12
SGCE-207ENST00000447873 IGSF22Q8N9C0 903 aa22.03■■□□□ 1.12
SGCE-207ENST00000447873 SPATA31C2B4DYI2 1134 aa22.02■■□□□ 1.12
SGCE-207ENST00000447873 GAS7O60861 476 aa22.02■■□□□ 1.12
SGCE-207ENST00000447873 SYMPKQ92797 1274 aaKnown RBP22.02■■□□□ 1.12
SGCE-207ENST00000447873 EPSTI1Q96J88 318 aa22.02■■□□□ 1.12
SGCE-207ENST00000447873 RIT2Q99578 217 aa22.02■■□□□ 1.12
SGCE-207ENST00000447873 APBA2Q99767 749 aa22.02■■□□□ 1.12
SGCE-207ENST00000447873 TINF2Q9BSI4 451 aa22.02■■□□□ 1.12
SGCE-207ENST00000447873 LRWD1Q9UFC0 647 aa22.02■■□□□ 1.12
SGCE-207ENST00000447873 POTEMA6NI47 508 aa22.01■■□□□ 1.11
SGCE-207ENST00000447873 PSMD10O75832 226 aa22.01■■□□□ 1.11
SGCE-207ENST00000447873 ICAM3P32942 547 aa22.01■■□□□ 1.11
SGCE-207ENST00000447873 TXLNAP40222 546 aa22.01■■□□□ 1.11
SGCE-207ENST00000447873 SEMA3FQ13275 785 aa22.01■■□□□ 1.11
SGCE-207ENST00000447873 USP49Q70CQ1 688 aa22.01■■□□□ 1.11
SGCE-207ENST00000447873 MSL3Q8N5Y2 521 aaKnown RBP22.01■■□□□ 1.11
SGCE-207ENST00000447873 TEKT3Q9BXF9 490 aa22.01■■□□□ 1.11
SGCE-207ENST00000447873 GOLPH3LQ9H4A5 285 aa22.01■■□□□ 1.11
SGCE-207ENST00000447873 TBC1D22BQ9NU19 505 aa22.01■■□□□ 1.11
SGCE-207ENST00000447873 TRAK2O60296 914 aa22■■□□□ 1.11
SGCE-207ENST00000447873 PFKFB1P16118 471 aa22■■□□□ 1.11
SGCE-207ENST00000447873 LIG1P18858 919 aa22■■□□□ 1.11
SGCE-207ENST00000447873 CDC25AP30304 524 aa22■■□□□ 1.11
SGCE-207ENST00000447873 UBA7P41226 1012 aa22■■□□□ 1.11
SGCE-207ENST00000447873 ITGB3BPQ13352 177 aaPredicted RBP22■■□□□ 1.11
SGCE-207ENST00000447873 FBXO16Q8IX29 292 aaPredicted RBP22■■□□□ 1.11
SGCE-207ENST00000447873 CD99L2Q8TCZ2 262 aa22■■□□□ 1.11
SGCE-207ENST00000447873 CDKN2AIPQ9NXV6 580 aaPredicted RBP22■■□□□ 1.11
SGCE-207ENST00000447873 VAV3Q9UKW4 847 aa22■■□□□ 1.11
SGCE-207ENST00000447873 SYNGAP1Q96PV0 1343 aa22■■□□□ 1.11
SGCE-207ENST00000447873 PP2D1A8MPX8 630 aa21.99■■□□□ 1.11
SGCE-207ENST00000447873 FKTNO75072 461 aa21.99■■□□□ 1.11
SGCE-207ENST00000447873 ATP9AO75110 1047 aa21.99■■□□□ 1.11
SGCE-207ENST00000447873 NDUFA8P51970 172 aa21.99■■□□□ 1.11
SGCE-207ENST00000447873 FAM160A1Q05DH4 1040 aa21.99■■□□□ 1.11
SGCE-207ENST00000447873 OTOP1Q7RTM1 612 aa21.99■■□□□ 1.11
SGCE-207ENST00000447873 SDF4Q9BRK5 362 aa21.99■■□□□ 1.11
SGCE-207ENST00000447873 VTA1Q9NP79 307 aa21.99■■□□□ 1.11
SGCE-207ENST00000447873 KCNH3Q9ULD8 1083 aa21.99■■□□□ 1.11
SGCE-207ENST00000447873 DHX15O43143 795 aaKnown RBP21.99■■□□□ 1.11
SGCE-207ENST00000447873 TGFB3P10600 412 aa21.99■■□□□ 1.11
SGCE-207ENST00000447873 KCNA2P16389 499 aa21.99■■□□□ 1.11
SGCE-207ENST00000447873 SPIRE1Q08AE8 756 aa21.99■■□□□ 1.11
SGCE-207ENST00000447873 KLHL40Q2TBA0 621 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms