RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 CASTP20810 708 aaKnown RBP16.15■□□□□ 0.18
TREX1-202ENST00000444177 RPS6KB1P23443 525 aa16.15■□□□□ 0.18
TREX1-202ENST00000444177 PSMA5P28066 241 aa16.15■□□□□ 0.18
TREX1-202ENST00000444177 LAMC2Q13753 1193 aa16.15■□□□□ 0.18
TREX1-202ENST00000444177 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.15■□□□□ 0.18
TREX1-202ENST00000444177 KAT2BQ92831 832 aa16.15■□□□□ 0.18
TREX1-202ENST00000444177 MRVI1Q9Y6F6 885 aa16.15■□□□□ 0.18
TREX1-202ENST00000444177 UNC80Q8N2C7 3258 aa16.15■□□□□ 0.18
TREX1-202ENST00000444177 CNTNAP5Q8WYK1 1306 aa16.15■□□□□ 0.18
TREX1-202ENST00000444177 hCG_1642624A0A1W2PR95 340 aa16.14■□□□□ 0.17
TREX1-202ENST00000444177 APOBRQ0VD83 1088 aa16.14■□□□□ 0.17
TREX1-202ENST00000444177 PGM5Q15124 567 aa16.14■□□□□ 0.17
TREX1-202ENST00000444177 DGKDQ16760 1214 aa16.14■□□□□ 0.17
TREX1-202ENST00000444177 FCHSD1Q86WN1 690 aa16.14■□□□□ 0.17
TREX1-202ENST00000444177 DHX37Q8IY37 1157 aaKnown RBP16.14■□□□□ 0.17
TREX1-202ENST00000444177 RETREG2Q8NC44 543 aa16.14■□□□□ 0.17
TREX1-202ENST00000444177 BRF1Q92994 677 aa16.14■□□□□ 0.17
TREX1-202ENST00000444177 EMID1Q96A84 441 aaPredicted RBP16.14■□□□□ 0.17
TREX1-202ENST00000444177 MSRAQ9UJ68 235 aa16.14■□□□□ 0.17
TREX1-202ENST00000444177 PITPNM1O00562 1244 aa16.13■□□□□ 0.17
TREX1-202ENST00000444177 PFKMP08237 780 aa16.13■□□□□ 0.17
TREX1-202ENST00000444177 IQCF3P0C7M6 154 aa16.13■□□□□ 0.17
TREX1-202ENST00000444177 METAP2P50579 478 aaKnown RBP eCLIP16.13■□□□□ 0.17
TREX1-202ENST00000444177 RAB30Q15771 203 aa16.13■□□□□ 0.17
TREX1-202ENST00000444177 PTGISQ16647 500 aa16.13■□□□□ 0.17
TREX1-202ENST00000444177 KCNV1Q6PIU1 500 aa16.13■□□□□ 0.17
TREX1-202ENST00000444177 HEATR3Q7Z4Q2 680 aa16.13■□□□□ 0.17
TREX1-202ENST00000444177 DEFB128Q7Z7B8 93 aa16.13■□□□□ 0.17
TREX1-202ENST00000444177 SESTD1Q86VW0 696 aa16.13■□□□□ 0.17
TREX1-202ENST00000444177 IL31RAQ8NI17 732 aa16.13■□□□□ 0.17
TREX1-202ENST00000444177 PPTC7Q8NI37 304 aa16.13■□□□□ 0.17
TREX1-202ENST00000444177 ZFP91Q96JP5 570 aaPredicted RBP16.13■□□□□ 0.17
TREX1-202ENST00000444177 USP26Q9BXU7 913 aa16.13■□□□□ 0.17
TREX1-202ENST00000444177 NOD1Q9Y239 953 aa16.13■□□□□ 0.17
TREX1-202ENST00000444177 SLC4A7Q9Y6M7 1214 aa16.13■□□□□ 0.17
TREX1-202ENST00000444177 CHD9Q3L8U1 2897 aa16.13■□□□□ 0.17
TREX1-202ENST00000444177 KIAA1217Q5T5P2 1943 aa16.13■□□□□ 0.17
TREX1-202ENST00000444177 PRUNE2Q8WUY3 3088 aa16.13■□□□□ 0.17
TREX1-202ENST00000444177 EIF5BO60841 1220 aaKnown RBP16.12■□□□□ 0.17
TREX1-202ENST00000444177 RFC2P35250 354 aa16.12■□□□□ 0.17
TREX1-202ENST00000444177 SP2Q02086 613 aa16.12■□□□□ 0.17
TREX1-202ENST00000444177 BFSP2Q13515 415 aa16.12■□□□□ 0.17
TREX1-202ENST00000444177 MYSM1Q5VVJ2 828 aa16.12■□□□□ 0.17
TREX1-202ENST00000444177 GDF6Q6KF10 455 aaPredicted RBP16.12■□□□□ 0.17
TREX1-202ENST00000444177 SMARCC2Q8TAQ2 1214 aa16.12■□□□□ 0.17
TREX1-202ENST00000444177 GPKOWQ92917 476 aaPredicted RBP eCLIP16.12■□□□□ 0.17
TREX1-202ENST00000444177 CUL5Q93034 780 aa16.12■□□□□ 0.17
TREX1-202ENST00000444177 TTC28Q96AY4 2481 aa16.12■□□□□ 0.17
TREX1-202ENST00000444177 ZBBXA8MT70 800 aa16.11■□□□□ 0.17
TREX1-202ENST00000444177 PPFIA4O75335 1185 aa16.11■□□□□ 0.17
TREX1-202ENST00000444177 TGFB3P10600 412 aa16.11■□□□□ 0.17
TREX1-202ENST00000444177 CDC27P30260 824 aa16.11■□□□□ 0.17
TREX1-202ENST00000444177 CCND2P30279 289 aa16.11■□□□□ 0.17
TREX1-202ENST00000444177 PSEN2P49810 448 aa16.11■□□□□ 0.17
TREX1-202ENST00000444177 RCAN1P53805 252 aa16.11■□□□□ 0.17
TREX1-202ENST00000444177 CELF3Q5SZQ8 465 aaKnown RBP16.11■□□□□ 0.17
TREX1-202ENST00000444177 CTAGE1Q96RT6 745 aa16.11■□□□□ 0.17
TREX1-202ENST00000444177 ALG1Q9BT22 464 aa16.11■□□□□ 0.17
TREX1-202ENST00000444177 NKX2-4Q9H2Z4 354 aa16.11■□□□□ 0.17
TREX1-202ENST00000444177 HDAC6Q9UBN7 1215 aa16.11■□□□□ 0.17
TREX1-202ENST00000444177 YBX2Q9Y2T7 364 aaKnown RBP16.11■□□□□ 0.17
TREX1-202ENST00000444177 EYSQ5T1H1 3165 aa16.1■□□□□ 0.17
TREX1-202ENST00000444177 HAS3O00219 553 aa16.1■□□□□ 0.17
TREX1-202ENST00000444177 SORBS3O60504 671 aa16.1■□□□□ 0.17
TREX1-202ENST00000444177 GGPS1O95749 300 aa16.1■□□□□ 0.17
TREX1-202ENST00000444177 ACTN1P12814 892 aa16.1■□□□□ 0.17
TREX1-202ENST00000444177 HOXD8P13378 290 aaPredicted RBP16.1■□□□□ 0.17
TREX1-202ENST00000444177 ATP2A2P16615 1042 aaKnown RBP16.1■□□□□ 0.17
TREX1-202ENST00000444177 RABGGTBP53611 331 aa16.1■□□□□ 0.17
TREX1-202ENST00000444177 RUFY3Q7L099 469 aa16.1■□□□□ 0.17
TREX1-202ENST00000444177 C7orf31Q8N865 590 aa16.1■□□□□ 0.17
TREX1-202ENST00000444177 SPATA33Q96N06 139 aa16.1■□□□□ 0.17
TREX1-202ENST00000444177 PRDM12Q9H4Q4 367 aa16.1■□□□□ 0.17
TREX1-202ENST00000444177 SLC28A3Q9HAS3 691 aa16.1■□□□□ 0.17
TREX1-202ENST00000444177 GTF2IRD1Q9UHL9 959 aa16.1■□□□□ 0.17
TREX1-202ENST00000444177 CYP46A1Q9Y6A2 500 aa16.1■□□□□ 0.17
TREX1-202ENST00000444177 NID2Q14112 1375 aa16.1■□□□□ 0.17
TREX1-202ENST00000444177 MYH7BA7E2Y1 1941 aa16.09■□□□□ 0.17
TREX1-202ENST00000444177 F2P00734 622 aa16.09■□□□□ 0.17
TREX1-202ENST00000444177 ZNF286BP0CG31 522 aa16.09■□□□□ 0.17
TREX1-202ENST00000444177 MRPS9P82933 396 aaKnown RBP16.09■□□□□ 0.17
TREX1-202ENST00000444177 MFSD10Q14728 455 aa16.09■□□□□ 0.17
TREX1-202ENST00000444177 KIAA0753Q2KHM9 967 aa16.09■□□□□ 0.17
TREX1-202ENST00000444177 HSDL1Q3SXM5 330 aa16.09■□□□□ 0.17
TREX1-202ENST00000444177 WWC2Q6AWC2 1192 aa16.09■□□□□ 0.17
TREX1-202ENST00000444177 USP17L6PQ6QN14 398 aa16.09■□□□□ 0.17
TREX1-202ENST00000444177 CCDC155Q8N6L0 562 aa16.09■□□□□ 0.17
TREX1-202ENST00000444177 CAGE1Q8TC20 777 aa16.09■□□□□ 0.17
TREX1-202ENST00000444177 KATNAL1Q9BW62 490 aa16.09■□□□□ 0.17
TREX1-202ENST00000444177 UPF3BQ9BZI7 483 aaKnown RBP16.09■□□□□ 0.17
TREX1-202ENST00000444177 FTOQ9C0B1 505 aaKnown RBP eCLIP16.09■□□□□ 0.17
TREX1-202ENST00000444177 BCAS3Q9H6U6 928 aa16.09■□□□□ 0.17
TREX1-202ENST00000444177 PSTPIP2Q9H939 334 aa16.09■□□□□ 0.17
TREX1-202ENST00000444177 ZSWIM6Q9HCJ5 1215 aa16.09■□□□□ 0.17
TREX1-202ENST00000444177 PCDHA11Q9Y5I1 949 aa16.09■□□□□ 0.17
TREX1-202ENST00000444177 FRMPD4Q14CM0 1322 aa16.09■□□□□ 0.17
TREX1-202ENST00000444177 TRIP12Q14669 1992 aaPredicted RBP16.09■□□□□ 0.17
TREX1-202ENST00000444177 TET1Q8NFU7 2136 aa16.09■□□□□ 0.17
TREX1-202ENST00000444177 SCN5AQ14524 2016 aa16.08■□□□□ 0.16
TREX1-202ENST00000444177 CCDC196A0A1B0GTZ2 297 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms