RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 CHMP4BP1P59074 171 aa18.78■□□□□ 0.6
SNRPD3-204ENST00000439775 RBL2Q08999 1139 aa18.78■□□□□ 0.6
SNRPD3-204ENST00000439775 MFSD10Q14728 455 aa18.78■□□□□ 0.6
SNRPD3-204ENST00000439775 GRIN2CQ14957 1233 aa18.78■□□□□ 0.6
SNRPD3-204ENST00000439775 GDF6Q6KF10 455 aaPredicted RBP18.78■□□□□ 0.6
SNRPD3-204ENST00000439775 AFAP1L1Q8TED9 768 aa18.78■□□□□ 0.6
SNRPD3-204ENST00000439775 SPATA33Q96N06 139 aa18.78■□□□□ 0.6
SNRPD3-204ENST00000439775 MSRAQ9UJ68 235 aa18.78■□□□□ 0.6
SNRPD3-204ENST00000439775 SLC4A7Q9Y6M7 1214 aa18.78■□□□□ 0.6
SNRPD3-204ENST00000439775 MEIS2O14770 477 aa18.77■□□□□ 0.6
SNRPD3-204ENST00000439775 CDC45O75419 566 aa18.77■□□□□ 0.6
SNRPD3-204ENST00000439775 ICAM3P32942 547 aa18.77■□□□□ 0.6
SNRPD3-204ENST00000439775 MRPS9P82933 396 aaKnown RBP18.77■□□□□ 0.6
SNRPD3-204ENST00000439775 SP2Q02086 613 aa18.77■□□□□ 0.6
SNRPD3-204ENST00000439775 KIAA0753Q2KHM9 967 aa18.77■□□□□ 0.6
SNRPD3-204ENST00000439775 HSDL1Q3SXM5 330 aa18.77■□□□□ 0.6
SNRPD3-204ENST00000439775 C7orf31Q8N865 590 aa18.77■□□□□ 0.6
SNRPD3-204ENST00000439775 CUL5Q93034 780 aa18.77■□□□□ 0.6
SNRPD3-204ENST00000439775 ACTN1P12814 892 aa18.76■□□□□ 0.59
SNRPD3-204ENST00000439775 RXRAP19793 462 aa18.76■□□□□ 0.59
SNRPD3-204ENST00000439775 TSGA10IPQ3SY00 556 aa18.76■□□□□ 0.59
SNRPD3-204ENST00000439775 PCNX4Q63HM2 1172 aa18.76■□□□□ 0.59
SNRPD3-204ENST00000439775 XRRA1Q6P2D8 792 aa18.76■□□□□ 0.59
SNRPD3-204ENST00000439775 TMTC3Q6ZXV5 915 aa18.76■□□□□ 0.59
SNRPD3-204ENST00000439775 DEFB128Q7Z7B8 93 aa18.76■□□□□ 0.59
SNRPD3-204ENST00000439775 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.76■□□□□ 0.59
SNRPD3-204ENST00000439775 FANCBQ8NB91 859 aa18.76■□□□□ 0.59
SNRPD3-204ENST00000439775 SMARCC2Q8TAQ2 1214 aa18.76■□□□□ 0.59
SNRPD3-204ENST00000439775 GPKOWQ92917 476 aaPredicted RBP eCLIP18.76■□□□□ 0.59
SNRPD3-204ENST00000439775 LRRC2Q9BYS8 371 aa18.76■□□□□ 0.59
SNRPD3-204ENST00000439775 HDAC6Q9UBN7 1215 aa18.76■□□□□ 0.59
SNRPD3-204ENST00000439775 ZBBXA8MT70 800 aa18.75■□□□□ 0.59
SNRPD3-204ENST00000439775 FIBPO43427 364 aa18.75■□□□□ 0.59
SNRPD3-204ENST00000439775 APOA5Q6Q788 366 aa18.75■□□□□ 0.59
SNRPD3-204ENST00000439775 USP17L6PQ6QN14 398 aa18.75■□□□□ 0.59
SNRPD3-204ENST00000439775 MICU3Q86XE3 530 aa18.75■□□□□ 0.59
SNRPD3-204ENST00000439775 CMTR1Q8N1G2 835 aaKnown RBP18.75■□□□□ 0.59
SNRPD3-204ENST00000439775 DHX38Q92620 1227 aaKnown RBP18.75■□□□□ 0.59
SNRPD3-204ENST00000439775 NEK1Q96PY6 1258 aa18.75■□□□□ 0.59
SNRPD3-204ENST00000439775 MLXIPQ9HAP2 919 aa18.75■□□□□ 0.59
SNRPD3-204ENST00000439775 PRUNE2Q8WUY3 3088 aa18.75■□□□□ 0.59
SNRPD3-204ENST00000439775 SPATA31C2B4DYI2 1134 aa18.74■□□□□ 0.59
SNRPD3-204ENST00000439775 PARNO95453 639 aaKnown RBP18.74■□□□□ 0.59
SNRPD3-204ENST00000439775 SELPP16109 830 aa18.74■□□□□ 0.59
SNRPD3-204ENST00000439775 ATP2A2P16615 1042 aaKnown RBP18.74■□□□□ 0.59
SNRPD3-204ENST00000439775 SEMA3FQ13275 785 aa18.74■□□□□ 0.59
SNRPD3-204ENST00000439775 PTK7Q13308 1070 aa18.74■□□□□ 0.59
SNRPD3-204ENST00000439775 NEDD9Q14511 834 aa18.74■□□□□ 0.59
SNRPD3-204ENST00000439775 KRT32Q14532 448 aa18.74■□□□□ 0.59
SNRPD3-204ENST00000439775 METTL7BQ6UX53 244 aa18.74■□□□□ 0.59
SNRPD3-204ENST00000439775 SYNE3Q6ZMZ3 975 aa18.74■□□□□ 0.59
SNRPD3-204ENST00000439775 ZFP91Q96JP5 570 aaPredicted RBP18.74■□□□□ 0.59
SNRPD3-204ENST00000439775 C16orf70Q9BSU1 422 aa18.74■□□□□ 0.59
SNRPD3-204ENST00000439775 ALG1Q9BT22 464 aa18.74■□□□□ 0.59
SNRPD3-204ENST00000439775 YBX2Q9Y2T7 364 aaKnown RBP18.74■□□□□ 0.59
SNRPD3-204ENST00000439775 PCDHA11Q9Y5I1 949 aa18.74■□□□□ 0.59
SNRPD3-204ENST00000439775 SCN5AQ14524 2016 aa18.73■□□□□ 0.59
SNRPD3-204ENST00000439775 DLL1O00548 723 aa18.73■□□□□ 0.59
SNRPD3-204ENST00000439775 SORBS3O60504 671 aa18.73■□□□□ 0.59
SNRPD3-204ENST00000439775 BAIAP3O94812 1187 aa18.73■□□□□ 0.59
SNRPD3-204ENST00000439775 EXOSC10Q01780 885 aaKnown RBP18.73■□□□□ 0.59
SNRPD3-204ENST00000439775 LRRC8DQ7L1W4 858 aa18.73■□□□□ 0.59
SNRPD3-204ENST00000439775 DHX32Q7L7V1 743 aaKnown RBP18.73■□□□□ 0.59
SNRPD3-204ENST00000439775 RAB11FIP4Q86YS3 637 aa18.73■□□□□ 0.59
SNRPD3-204ENST00000439775 RASEFQ8IZ41 740 aa18.73■□□□□ 0.59
SNRPD3-204ENST00000439775 SLC9A7Q96T83 725 aa18.73■□□□□ 0.59
SNRPD3-204ENST00000439775 SENP7Q9BQF6 1050 aa18.73■□□□□ 0.59
SNRPD3-204ENST00000439775 NKX2-4Q9H2Z4 354 aa18.73■□□□□ 0.59
SNRPD3-204ENST00000439775 PSTPIP2Q9H939 334 aa18.73■□□□□ 0.59
SNRPD3-204ENST00000439775 SLC28A3Q9HAS3 691 aa18.73■□□□□ 0.59
SNRPD3-204ENST00000439775 RBM28Q9NW13 759 aaKnown RBP18.73■□□□□ 0.59
SNRPD3-204ENST00000439775 CHD7Q9P2D1 2997 aa18.72■□□□□ 0.59
SNRPD3-204ENST00000439775 NOP56O00567 594 aaKnown RBP18.72■□□□□ 0.59
SNRPD3-204ENST00000439775 LGALS2P05162 132 aa18.72■□□□□ 0.59
SNRPD3-204ENST00000439775 CKBP12277 381 aa18.72■□□□□ 0.59
SNRPD3-204ENST00000439775 HOXC8P31273 242 aa18.72■□□□□ 0.59
SNRPD3-204ENST00000439775 PHOSPHO2Q8TCD6 241 aa18.72■□□□□ 0.59
SNRPD3-204ENST00000439775 GAS2L1Q99501 681 aaPredicted RBP18.72■□□□□ 0.59
SNRPD3-204ENST00000439775 FTOQ9C0B1 505 aaKnown RBP eCLIP18.72■□□□□ 0.59
SNRPD3-204ENST00000439775 RTEL1Q9NZ71 1219 aa18.72■□□□□ 0.59
SNRPD3-204ENST00000439775 CNTNAP5Q8WYK1 1306 aa18.72■□□□□ 0.59
SNRPD3-204ENST00000439775 H3BRB1 525 aa18.71■□□□□ 0.59
SNRPD3-204ENST00000439775 CXCL10P02778 98 aa18.71■□□□□ 0.59
SNRPD3-204ENST00000439775 HMGB1P09429 215 aaKnown RBP18.71■□□□□ 0.59
SNRPD3-204ENST00000439775 RABGGTBP53611 331 aa18.71■□□□□ 0.59
SNRPD3-204ENST00000439775 RCAN1P53805 252 aa18.71■□□□□ 0.59
SNRPD3-204ENST00000439775 TRIM71Q2Q1W2 868 aaKnown RBP18.71■□□□□ 0.59
SNRPD3-204ENST00000439775 ADCK5Q3MIX3 580 aa18.71■□□□□ 0.59
SNRPD3-204ENST00000439775 CYFIP1Q7L576 1253 aa18.71■□□□□ 0.59
SNRPD3-204ENST00000439775 NLRX1Q86UT6 975 aa18.71■□□□□ 0.59
SNRPD3-204ENST00000439775 TEX2Q8IWB9 1127 aa18.71■□□□□ 0.59
SNRPD3-204ENST00000439775 GPR20Q99678 358 aa18.71■□□□□ 0.59
SNRPD3-204ENST00000439775 USP26Q9BXU7 913 aa18.71■□□□□ 0.59
SNRPD3-204ENST00000439775 PRDM12Q9H4Q4 367 aa18.71■□□□□ 0.59
SNRPD3-204ENST00000439775 TUT1Q9H6E5 874 aaKnown RBP18.71■□□□□ 0.59
SNRPD3-204ENST00000439775 BCAS3Q9H6U6 928 aa18.71■□□□□ 0.59
SNRPD3-204ENST00000439775 GBF1Q92538 1859 aa18.71■□□□□ 0.59
SNRPD3-204ENST00000439775 MYH7BA7E2Y1 1941 aa18.7■□□□□ 0.58
SNRPD3-204ENST00000439775 hCG_1642624A0A1W2PR95 340 aa18.7■□□□□ 0.58
SNRPD3-204ENST00000439775 ZBTB43O43298 467 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms