RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 STAM2O75886 525 aa23.43■■□□□ 1.34
NCKIPSD-206ENST00000439518 ZNF286BP0CG31 522 aa23.43■■□□□ 1.34
NCKIPSD-206ENST00000439518 BFSP2Q13515 415 aa23.43■■□□□ 1.34
NCKIPSD-206ENST00000439518 TSGA10IPQ3SY00 556 aa23.43■■□□□ 1.34
NCKIPSD-206ENST00000439518 USP17L6PQ6QN14 398 aa23.43■■□□□ 1.34
NCKIPSD-206ENST00000439518 SPATA33Q96N06 139 aa23.43■■□□□ 1.34
NCKIPSD-206ENST00000439518 KATNAL1Q9BW62 490 aa23.43■■□□□ 1.34
NCKIPSD-206ENST00000439518 HDAC6Q9UBN7 1215 aa23.43■■□□□ 1.34
NCKIPSD-206ENST00000439518 GTF2IRD1Q9UHL9 959 aa23.43■■□□□ 1.34
NCKIPSD-206ENST00000439518 SLC4A7Q9Y6M7 1214 aa23.43■■□□□ 1.34
NCKIPSD-206ENST00000439518 UNC80Q8N2C7 3258 aa23.43■■□□□ 1.34
NCKIPSD-206ENST00000439518 MYH7BA7E2Y1 1941 aa23.43■■□□□ 1.34
NCKIPSD-206ENST00000439518 CDC45O75419 566 aa23.42■■□□□ 1.34
NCKIPSD-206ENST00000439518 ICAM3P32942 547 aa23.42■■□□□ 1.34
NCKIPSD-206ENST00000439518 EXOSC10Q01780 885 aaKnown RBP23.42■■□□□ 1.34
NCKIPSD-206ENST00000439518 MFSD10Q14728 455 aa23.42■■□□□ 1.34
NCKIPSD-206ENST00000439518 RAB30Q15771 203 aa23.42■■□□□ 1.34
NCKIPSD-206ENST00000439518 TMTC3Q6ZXV5 915 aa23.42■■□□□ 1.34
NCKIPSD-206ENST00000439518 DEFB128Q7Z7B8 93 aa23.42■■□□□ 1.34
NCKIPSD-206ENST00000439518 RAB11FIP4Q86YS3 637 aa23.42■■□□□ 1.34
NCKIPSD-206ENST00000439518 RASEFQ8IZ41 740 aa23.42■■□□□ 1.34
NCKIPSD-206ENST00000439518 MAFAQ8NHW3 353 aaPredicted RBP23.42■■□□□ 1.34
NCKIPSD-206ENST00000439518 DHX38Q92620 1227 aaKnown RBP23.42■■□□□ 1.34
NCKIPSD-206ENST00000439518 NEK1Q96PY6 1258 aa23.42■■□□□ 1.34
NCKIPSD-206ENST00000439518 EYSQ5T1H1 3165 aa23.42■■□□□ 1.34
NCKIPSD-206ENST00000439518 SCN5AQ14524 2016 aa23.42■■□□□ 1.34
NCKIPSD-206ENST00000439518 SPATA31C2B4DYI2 1134 aa23.41■■□□□ 1.34
NCKIPSD-206ENST00000439518 SORBS3O60504 671 aa23.41■■□□□ 1.34
NCKIPSD-206ENST00000439518 FOSL2P15408 326 aa23.41■■□□□ 1.34
NCKIPSD-206ENST00000439518 RBL2Q08999 1139 aa23.41■■□□□ 1.34
NCKIPSD-206ENST00000439518 SEMA3FQ13275 785 aa23.41■■□□□ 1.34
NCKIPSD-206ENST00000439518 KIAA0753Q2KHM9 967 aa23.41■■□□□ 1.34
NCKIPSD-206ENST00000439518 XRRA1Q6P2D8 792 aa23.41■■□□□ 1.34
NCKIPSD-206ENST00000439518 C7orf31Q8N865 590 aa23.41■■□□□ 1.34
NCKIPSD-206ENST00000439518 SMARCC2Q8TAQ2 1214 aa23.41■■□□□ 1.34
NCKIPSD-206ENST00000439518 CAGE1Q8TC20 777 aa23.41■■□□□ 1.34
NCKIPSD-206ENST00000439518 ALG1Q9BT22 464 aa23.41■■□□□ 1.34
NCKIPSD-206ENST00000439518 BCAS3Q9H6U6 928 aa23.41■■□□□ 1.34
NCKIPSD-206ENST00000439518 MSRAQ9UJ68 235 aa23.41■■□□□ 1.34
NCKIPSD-206ENST00000439518 GNPTABQ3T906 1256 aa23.4■■□□□ 1.34
NCKIPSD-206ENST00000439518 PCNX4Q63HM2 1172 aa23.4■■□□□ 1.34
NCKIPSD-206ENST00000439518 APOA5Q6Q788 366 aa23.4■■□□□ 1.34
NCKIPSD-206ENST00000439518 CCDC155Q8N6L0 562 aa23.4■■□□□ 1.34
NCKIPSD-206ENST00000439518 AFAP1L1Q8TED9 768 aa23.4■■□□□ 1.34
NCKIPSD-206ENST00000439518 CUL5Q93034 780 aa23.4■■□□□ 1.34
NCKIPSD-206ENST00000439518 C16orf70Q9BSU1 422 aa23.4■■□□□ 1.34
NCKIPSD-206ENST00000439518 MLXIPQ9HAP2 919 aa23.4■■□□□ 1.34
NCKIPSD-206ENST00000439518 YBX2Q9Y2T7 364 aaKnown RBP23.4■■□□□ 1.34
NCKIPSD-206ENST00000439518 PRUNE2Q8WUY3 3088 aa23.4■■□□□ 1.34
NCKIPSD-206ENST00000439518 TANC1Q9C0D5 1861 aa23.39■■□□□ 1.34
NCKIPSD-206ENST00000439518 hCG_1642624A0A1W2PR95 340 aa23.39■■□□□ 1.33
NCKIPSD-206ENST00000439518 ZBBXA8MT70 800 aa23.39■■□□□ 1.33
NCKIPSD-206ENST00000439518 GPNMBQ14956 572 aa23.39■■□□□ 1.33
NCKIPSD-206ENST00000439518 ADCK5Q3MIX3 580 aa23.39■■□□□ 1.33
NCKIPSD-206ENST00000439518 DHX32Q7L7V1 743 aaKnown RBP23.39■■□□□ 1.33
NCKIPSD-206ENST00000439518 MICU3Q86XE3 530 aa23.39■■□□□ 1.33
NCKIPSD-206ENST00000439518 CCDC82Q8N4S0 544 aa23.39■■□□□ 1.33
NCKIPSD-206ENST00000439518 PSTPIP2Q9H939 334 aa23.39■■□□□ 1.33
NCKIPSD-206ENST00000439518 RTEL1Q9NZ71 1219 aa23.39■■□□□ 1.33
NCKIPSD-206ENST00000439518 MYO9BQ13459 2157 aa23.38■■□□□ 1.33
NCKIPSD-206ENST00000439518 CHD7Q9P2D1 2997 aa23.38■■□□□ 1.33
NCKIPSD-206ENST00000439518 FIBPO43427 364 aa23.38■■□□□ 1.33
NCKIPSD-206ENST00000439518 ACTN1P12814 892 aa23.38■■□□□ 1.33
NCKIPSD-206ENST00000439518 ATP2A2P16615 1042 aaKnown RBP23.38■■□□□ 1.33
NCKIPSD-206ENST00000439518 SYNE3Q6ZMZ3 975 aa23.38■■□□□ 1.33
NCKIPSD-206ENST00000439518 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.38■■□□□ 1.33
NCKIPSD-206ENST00000439518 NKX2-4Q9H2Z4 354 aa23.38■■□□□ 1.33
NCKIPSD-206ENST00000439518 BRPF3Q9ULD4 1205 aa23.38■■□□□ 1.33
NCKIPSD-206ENST00000439518 TRIP12Q14669 1992 aaPredicted RBP23.38■■□□□ 1.33
NCKIPSD-206ENST00000439518 TET1Q8NFU7 2136 aa23.38■■□□□ 1.33
NCKIPSD-206ENST00000439518 DLL1O00548 723 aa23.37■■□□□ 1.33
NCKIPSD-206ENST00000439518 SELPP16109 830 aa23.37■■□□□ 1.33
NCKIPSD-206ENST00000439518 RABGGTBP53611 331 aa23.37■■□□□ 1.33
NCKIPSD-206ENST00000439518 PTK7Q13308 1070 aa23.37■■□□□ 1.33
NCKIPSD-206ENST00000439518 NEDD9Q14511 834 aa23.37■■□□□ 1.33
NCKIPSD-206ENST00000439518 HIC1Q14526 733 aa23.37■■□□□ 1.33
NCKIPSD-206ENST00000439518 KRT32Q14532 448 aa23.37■■□□□ 1.33
NCKIPSD-206ENST00000439518 TRIM71Q2Q1W2 868 aaKnown RBP23.37■■□□□ 1.33
NCKIPSD-206ENST00000439518 METTL7BQ6UX53 244 aa23.37■■□□□ 1.33
NCKIPSD-206ENST00000439518 TCEANC2Q96MN5 208 aa23.37■■□□□ 1.33
NCKIPSD-206ENST00000439518 PCDHA11Q9Y5I1 949 aa23.37■■□□□ 1.33
NCKIPSD-206ENST00000439518 CKBP12277 381 aa23.36■■□□□ 1.33
NCKIPSD-206ENST00000439518 ZNF200P98182 395 aaPredicted RBP23.36■■□□□ 1.33
NCKIPSD-206ENST00000439518 FUT2Q10981 343 aa23.36■■□□□ 1.33
NCKIPSD-206ENST00000439518 LRRC8DQ7L1W4 858 aa23.36■■□□□ 1.33
NCKIPSD-206ENST00000439518 CYFIP1Q7L576 1253 aa23.36■■□□□ 1.33
NCKIPSD-206ENST00000439518 KCNB2Q92953 911 aa23.36■■□□□ 1.33
NCKIPSD-206ENST00000439518 CCDC136Q96JN2 1154 aa23.36■■□□□ 1.33
NCKIPSD-206ENST00000439518 SENP7Q9BQF6 1050 aa23.36■■□□□ 1.33
NCKIPSD-206ENST00000439518 FTOQ9C0B1 505 aaKnown RBP eCLIP23.36■■□□□ 1.33
NCKIPSD-206ENST00000439518 SLC28A3Q9HAS3 691 aa23.36■■□□□ 1.33
NCKIPSD-206ENST00000439518 GBF1Q92538 1859 aa23.36■■□□□ 1.33
NCKIPSD-206ENST00000439518 H3BRB1 525 aa23.35■■□□□ 1.33
NCKIPSD-206ENST00000439518 LGALS2P05162 132 aa23.35■■□□□ 1.33
NCKIPSD-206ENST00000439518 HOXC8P31273 242 aa23.35■■□□□ 1.33
NCKIPSD-206ENST00000439518 WNT8BQ93098 351 aa23.35■■□□□ 1.33
NCKIPSD-206ENST00000439518 GPR20Q99678 358 aa23.35■■□□□ 1.33
NCKIPSD-206ENST00000439518 PRDM12Q9H4Q4 367 aa23.35■■□□□ 1.33
NCKIPSD-206ENST00000439518 TUT1Q9H6E5 874 aaKnown RBP23.35■■□□□ 1.33
NCKIPSD-206ENST00000439518 RBM28Q9NW13 759 aaKnown RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms